~asc/fluidity/fluidity-darwin-port-new-new : changes

~asc/fluidity/fluidity-darwin-port-new-new » Changes from revision 3965

From Revision 3957 to 3938

Rev	Summary	Authors	Date
3957	Minor chnage to configure to get the HECToR build working Minor chnage to configure to get the HECToR build working	Jon Hill	12 years ago
3956	Remove two test cases that have a memory leak on Precise. Th... Remove two test cases that have a memory leak on Precise. This is linked to bug report: https://bugs.launchpad.net/fluidity/+bug/963989 and branch: lp:~btollit/fluidity/3mat_p1dgp2_test_cty_cv_memory_leak	Brendan Tollit	12 years ago
3955	Remove options to use the CV Ultimate limiter from metric ad... Remove options to use the CV Ultimate limiter from metric advection as the code does not permit it. Add 2 tests for the advection of a scalar field using the CV Ultimate limiter as there were none. Both use a P1 FE face value before limiting. One advects a step change, the other is a copy of an mms case. Also add the mms case for the CV Sweby limiter for comparison. For the step advection Ultimate is far better than Sweby but not quite as sharp as HyperC, which is expected. For the mms test case it was found necessary to apply a strong BC for the Ultimate limiter case so that it will converge to a steady state - this however reduces the order of convergence achieved. No actual code changed, only options schema and test cases. tests/mms_tracer_cv_adv_steady/MMS_E_cv.flml is removed as it is not used. Linked to bugs: https://bugs.launchpad.net/fluidity/+bug/934250 https://bugs.launchpad.net/fluidity/+bug/934259	Brendan Tollit	12 years ago
3954	Precise build fix for the cv_mass_matrix_check_p1 and Precise build fix for the cv_mass_matrix_check_p1 and cv_mass_matrix_check_p2 test cases. Issue was actually gmsh. These test cases require a one element mesh to do some very basic checks of the CV mass matrix. The gmsh with the precise buildbot doesnt seem to be able to do that anymore with these .geo files. Therefore commit the very simple .msh files that do work. Adjust the test Makefile's as required.	Brendan Tollit	12 years ago
3953	fix for create_param_sweep fix for create_param_sweep	Simon Mouradian	12 years ago
3952	Updating to new base schema. Updating to new base schema.	Cian Wilson	12 years ago
3951	A tool to radially scale .vtu files on the sphere. A tool to radially scale .vtu files on the sphere.	Simon Mouradian	12 years ago
3950	This deals with bug https://bugs.launchpad.net/fluidity/+bug... This deals with bug https://bugs.launchpad.net/fluidity/+bug/947049 "The script gmsh2triangle tries to identify isolated nodes that are not attached to any elements (isolated nodes) and leaves these out of the output triangle files. This requires a renumbering of the nodes. However this renumbering is only applied to the .ele file but not .edge/.face file. Thus this renumbering only works correctly when the isolated nodes have node numbers that are bigger than any of the boundary nodes. Otherwise the node numbering of the surface mesh and the interior mesh no longer correspond leading to very onobvious errors in fluidity." Fixed by no longer applying any renumbering. This was decided to be the best fix as gmsh meshes are now also be readable directly by fluidity, in which case isolated nodes would be read as well. So if isolated nodes are present in the input gmsh .msh it's up to the user to fix.	Stephan Kramer	12 years ago
3949	Avoid memory blowup in update_options Avoid memory blowup in update_options When schema files are read in diamond, the tree-structure is memoised internally to improve performance. But this comes at the expense of additional memory use. Previously in update_options we would read the relevant schema file for every file we were checking. This would never hit the previously memoised values, since object ids were different. Instead, build a dictionary of pre-parsed schemas and just grab the relevant one when checking a file.	Lawrence Mitchell	12 years ago
3948	r.3947 failed; the system it ran on had an old version of sp... r.3947 failed; the system it ran on had an old version of spud/diamond installed. The Spud 1.1.4 (lp:spud r.520) packages are now out and this is the result of running tools/update_options.py on a system with those packages installed.	Tim Greaves	12 years ago
3947	Following the update of spud in Fluidity to r.520 of lp:spud... Following the update of spud in Fluidity to r.520 of lp:spud, this commit updates all options files in the Fluidity trunk, resulting from running tools/update_options.py.	Tim Greaves	12 years ago
3946	Merging upstream updates to spud into the Fluidity trunk; th... Merging upstream updates to spud into the Fluidity trunk; this brings the local copy in Fluidity in sync with r.520 of the spud trunk.	Tim Greaves	12 years ago
3945	Small changes to the mphase_tephra_settling test to reduce t... Small changes to the mphase_tephra_settling test to reduce the runtime. Passes locally.	Christian Jacobs	12 years ago
3944	Shortening the test again. Should be half the time now Shortening the test again. Should be half the time now	Jon Hill	12 years ago
3943	One-line fix in buildsystem only targetting bug lp:920446. One-line fix in buildsystem only targetting bug lp:920446. This checks for an empty DESTDIR and replaces such with / rather than supplying an empty --root= which was causing problems with distutils. Thanks to Patrick, Florian, and Stephan for input.	Tim Greaves	12 years ago
3942	And four became two. Hopefully this passes in less than 10 m... And four became two. Hopefully this passes in less than 10 mins on buildbot	Jon Hill	12 years ago
3941	Change solver and steady state tolerances to speed this test... Change solver and steady state tolerances to speed this test up. Now runs in less than 1 minute on my system.	Rhodri Davies	12 years ago
3940	Shortening gls-KP test by remove one of the four tests withi... Shortening gls-KP test by remove one of the four tests within this	Jon Hill	12 years ago
3939	Relax two tolerances for the intel build for this recently a... Relax two tolerances for the intel build for this recently added test. 5.0e-03 --> 8.0e-03 (integral of tracer) 5.0e-04 --> 6.0e-04 (min of tracer)	Brendan Tollit	12 years ago
3938	Small correction to last merge. Only use the relevant variab... Small correction to last merge. Only use the relevant variables from Global parameters and correct some repetetive English in a couple of FLExit's.	Brendan Tollit	12 years ago

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