Viewing all changes in revision 1.
- Committer: hhiester
- Date: 2009-12-16 14:11:47 UTC
- Revision ID: svn-v4:5bf5533e-7014-46e3-b1bb-cce4b9d03719:trunk:2
deleting initialisation as none of tools are used any longer.Â
Updating configure, config.in and Makefile.in
Updating configure, config.in and Makefile.in
- files added:
- adjoint
- assemble
- assemble/tests
- bin
- climatology
- debian
- debug
- decomp
- decomp/tests
- diagnostics
- error_measures
- error_measures/tests
- femtools
- femtools/doc
- femtools/doc/scripts
- femtools/tests
- forward_interfaces
- gallopede
- gallopede/lib
- gallopede/tests
- gallopede/tests/oned
- gallopede/tests/periodic
- gallopede/tools
- horizontal_adaptivity
- horizontal_adaptivity/tests
- include
- interpolation
- interpolation/doc
- interpolation/include
- interpolation/src
- legacy_femtools
- libalgencan
- libjudy
- libjudy/autom4te.cache
- libjudy/doc
- libjudy/doc/ext
- libjudy/doc/int
- libjudy/doc/man
- libjudy/doc/man/man3
- libjudy/examples
- libjudy/src
- libjudy/src/Judy1
- libjudy/src/JudyCommon
- libjudy/src/JudyHS
- libjudy/src/JudyL
- libjudy/src/JudySL
- libjudy/src/apps
- libjudy/src/apps/demo
- libjudy/src/obj
- libjudy/test
- libjudy/test/Centrino_1.3Mhz_Plots
- libjudy/tool
- libmba3d
- libwm
- main
- manual
- manual/examples_images
- manual/examples_images/annulus
- manual/examples_images/lock_exchange
- manual/examples_images/sediment
- manual/examples_images/stokes
- manual/misc_images
- manual/numerical_discretisation_images
- manual/numerical_discretisation_images/advective_stabilisation
- manual/visualisation_and_diagnostics_images
- mayavi
- mayavi/mayavi_amcg
- mayavi/mayavi_amcg/filters
- ocean_forcing
- ocean_forcing/tests
- parallel
- parallel/tests
- parameterisation
- parameterisation/tests
- preprocessor
- python
- python/elementtree
- python/fluidity
- python/fluidity/diagnostics
- python/fluidity_ufl
- qg_strat
- qg_strat/test
- qg_strat/unittests
- qg_strat/unittests/meshes
- qg_strat/unittests/output
- qg_strat/unittests/python_functions
- scripts
- spatialindex-1.3.2
- spatialindex-1.3.2/include
- spatialindex-1.3.2/include/tools
- spatialindex-1.3.2/regressiontest
- spatialindex-1.3.2/regressiontest/mvrtree
- spatialindex-1.3.2/regressiontest/mvrtree/test1
- spatialindex-1.3.2/regressiontest/mvrtree/test2
- spatialindex-1.3.2/regressiontest/rtree
- spatialindex-1.3.2/regressiontest/rtree/test1
- spatialindex-1.3.2/regressiontest/rtree/test2
- spatialindex-1.3.2/regressiontest/rtree/test3
- spatialindex-1.3.2/regressiontest/rtree/test4
- spatialindex-1.3.2/regressiontest/tprtree
- spatialindex-1.3.2/regressiontest/tprtree/test1
- spatialindex-1.3.2/regressiontest/tprtree/test2
- spatialindex-1.3.2/src
- spatialindex-1.3.2/src/mvrtree
- spatialindex-1.3.2/src/rtree
- spatialindex-1.3.2/src/spatialindex
- spatialindex-1.3.2/src/storagemanager
- spatialindex-1.3.2/src/tools
- spatialindex-1.3.2/src/tprtree
- spatialindex-1.4.0exp
- spatialindex-1.4.0exp/include
- spatialindex-1.4.0exp/include/capi
- spatialindex-1.4.0exp/include/tools
- spatialindex-1.4.0exp/regressiontest
- spatialindex-1.4.0exp/regressiontest/mvrtree
- spatialindex-1.4.0exp/regressiontest/rtree
- spatialindex-1.4.0exp/regressiontest/tprtree
- spatialindex-1.4.0exp/src
- spatialindex-1.4.0exp/src/capi
- spatialindex-1.4.0exp/src/mvrtree
- spatialindex-1.4.0exp/src/rtree
- spatialindex-1.4.0exp/src/spatialindex
- spatialindex-1.4.0exp/src/storagemanager
- spatialindex-1.4.0exp/src/tools
- spatialindex-1.4.0exp/src/tprtree
- tests
- tests/3material-droplet
- tests/3material-droplet-adapt
- tests/3material-droplet-adapt/src
- tests/3material-droplet/src
- tests/3material-oneblobs
- tests/3material-oneblobs-reversed
- tests/3material-oneblobs-reversed/src
- tests/3material-oneblobs/src
- tests/3material-twoblobs
- tests/3material-twoblobs-reversed
- tests/3material-twoblobs-reversed/src
- tests/3material-twoblobs/src
- tests/5material-droplet-adapt
- tests/5material-droplet-adapt-lumped
- tests/5material-droplet-adapt-lumped/src
- tests/5material-droplet-adapt/src
- tests/5material-droplet-parallel
- tests/5material-droplet-parallel/src
- tests/5material-droplet-serial
- tests/5material-droplet-serial/src
- tests/IGW
- tests/Instability
- tests/MY25-KatoPhilips
- tests/MY25-KatoPhilips/src
- tests/Stokes_mms_cg_p1p1
- tests/Stokes_mms_cg_p1p1/src
- tests/Stokes_mms_cg_p2p1
- tests/Stokes_mms_cg_p2p1/src
- tests/Stokes_square_convection_1e4_p1p1
- tests/Stokes_square_convection_1e4_p1p1/src
- tests/Stokes_square_convection_1e4_p1p1_parallel
- tests/Stokes_square_convection_1e4_p1p1_parallel/src
- tests/Stokes_square_convection_1e4_p1p1cv
- tests/Stokes_square_convection_1e4_p1p1cv/src
- tests/Stokes_square_convection_1e4_p2p1
- tests/Stokes_square_convection_1e4_p2p1/src
- tests/Stommel_gyre
- tests/Stommel_streamfunction
- tests/Stommel_streamfunction/src
- tests/adaptive-timestep-test
- tests/adaptive-timestep-test/src
- tests/annulus-dg
- tests/annulus-dg/src
- tests/annulus-diffusive
- tests/annulus-diffusive/src
- tests/avlesen
- tests/backward_facing_step_2d
- tests/backward_facing_step_2d/src
- tests/backward_facing_step_3d
- tests/backward_facing_step_3d/src
- tests/balance-pressure
- tests/balance-pressure/src
- tests/binary_detectors
- tests/binary_detectors/src
- tests/bingham-slope
- tests/bingham-slope/src
- tests/biology-nophysics
- tests/biology-nophysics/src
- tests/biology-nophysics_checkpoint
- tests/biology-nophysics_checkpoint/src
- tests/cdisk_2d_dg
- tests/cdisk_2d_dg/src
- tests/channel_wind_drag
- tests/channel_wind_drag/src
- tests/channel_wind_drag_rotated
- tests/channel_wind_drag_rotated/src
- tests/coarse-corner-limited
- tests/coarse-corner-limited/src
- tests/coarse-corner-locked
- tests/coarse-corner-locked/src
- tests/cube-1
- tests/cube-1/src
- tests/cube-dg
- tests/cube-dg/src
- tests/cv_auxiliary_eqn
- tests/cv_auxiliary_eqn/src
- tests/cv_mixing_bin_test_serial
- tests/cv_mixing_bin_test_serial/src
- tests/data
- tests/data/intersection_finder
- tests/data/test_metric_advection
- tests/detectors
- tests/detectors/src
- tests/dg_auxiliary_eqn
- tests/dg_auxiliary_eqn/src
- tests/diamond_validation
- tests/diffusion-dg
- tests/diffusion-dg/src
- tests/diffusion_2d_p0_parallel
- tests/diffusion_2d_p0_parallel/src
- tests/diffusion_2d_p0_serial
- tests/diffusion_2d_p0_serial/src
- tests/driven_cavity_2d
- tests/driven_cavity_2d/src
- tests/driven_cavity_2d_dg
- tests/driven_cavity_2d_dg/src
- tests/driven_cavity_coarse-inner_element
- tests/driven_cavity_coarse-inner_element/src
- tests/driven_cavity_coarse-inner_element_dg
- tests/driven_cavity_coarse-inner_element_dg/src
- tests/driven_cavity_coarse-inner_element_quadratic_pressure
- tests/driven_cavity_coarse-inner_element_quadratic_pressure/src
- tests/ekman
- tests/elastic-cube
- tests/elastic-cube/src
- tests/elastic-slice
- tests/elastic-slice/src
- tests/electrochemical_p1p1_2d
- tests/electrochemical_p1p1_2d/src
- tests/electrokinetic_p1p1_2d
- tests/electrokinetic_p1p1_2d/src
- tests/electrothermal_p1p1_2d
- tests/electrothermal_p1p1_2d/src
- tests/explicit-hyperc-hexes
- tests/explicit-hyperc-hexes/src
- tests/explicit-hyperc-quads
- tests/explicit-hyperc-quads/src
- tests/explicit-hyperc-tets
- tests/explicit-hyperc-tets/src
- tests/explicit-hyperc-tris
- tests/explicit-hyperc-tris-p2
- tests/explicit-hyperc-tris-p2/src
- tests/explicit-hyperc-tris-periodic-local
- tests/explicit-hyperc-tris-periodic-local/src
- tests/explicit-hyperc-tris-periodic-projgd
- tests/explicit-hyperc-tris-periodic-projgd/src
- tests/explicit-hyperc-tris-periodic-projpt
- tests/explicit-hyperc-tris-periodic-projpt/src
- tests/explicit-hyperc-tris/src
- tests/fladapt
- tests/fladapt/src
- tests/fldecomp
- tests/fldecomp/src
- tests/fldecomp_1d
- tests/fldecomp_1d/src
- tests/fldecomp_2d
- tests/fldecomp_2d/src
- tests/forcing
- tests/forcing/src
- tests/geopressure_convergence
- tests/geopressure_convergence/src
- tests/geopressure_convergence_p3
- tests/geopressure_convergence_p3/src
- tests/gls-Bermuda-biology-forcing
- tests/gls-Bermuda-biology-forcing/src
- tests/gls-Kato_Phillips-mixed_layer_depth
- tests/gls-Kato_Phillips-mixed_layer_depth/gls-Kato_Phillips-mixed_layer_depth-k_epsilon-CanutoA.flml
- tests/gls-Kato_Phillips-mixed_layer_depth/src
- tests/gls-StationPapa-biology
- tests/gls-StationPapa-biology-forcing
- tests/gls-StationPapa-biology-forcing/src
- tests/gls-StationPapa-biology/src
- tests/grid_peclet_number
- tests/grid_peclet_number/src
- tests/gyre
- tests/gyre/src
- tests/gyre_2d
- tests/gyre_2d/src
- tests/gyre_baroclinic
- tests/gyre_layered
- tests/gyre_layered/src
- tests/heat_2d_dg
- tests/heat_2d_dg/src
- tests/heat_2d_dg_ip
- tests/heat_2d_dg_ip/src
- tests/internal_wave
- tests/internal_wave/src
- tests/just-coarsen-parallel
- tests/kelvin_wave
- tests/kelvin_wave/src
- tests/lauwerier
- tests/lauwerier/src
- tests/lituya_bay_parallel
- tests/lituya_bay_parallel/src
- tests/lock_exchange_2d_cg
- tests/lock_exchange_2d_cg/src
- tests/lock_exchange_2d_cg_parallel
- tests/lock_exchange_2d_cg_parallel/src
- tests/lock_exchange_2d_dg
- tests/lock_exchange_2d_dg/src
- tests/lock_exchange_2d_dg_p1dg_p2_adaptive_parallel
- tests/lock_exchange_2d_dg_p1dg_p2_adaptive_parallel/src
- tests/lock_exchange_2d_dg_quad
- tests/lock_exchange_2d_dg_quad/src
- tests/lotka_volterra_0d
- tests/lotka_volterra_0d/src
- tests/mmat-adapt-after-checkpoint
- tests/mmat-adapt-after-checkpoint/src
- tests/mmat-balancepressure
- tests/mmat-balancepressure/src
- tests/mmat-flowthrough
- tests/mmat-flowthrough-dg
- tests/mmat-flowthrough-dg/src
- tests/mmat-flowthrough/src
- tests/mmat-gravity-col
- tests/mmat-gravity-col-p0p1-weak
- tests/mmat-gravity-col-p0p1-weak/src
- tests/mmat-gravity-col-p0p1cv-weak
- tests/mmat-gravity-col-p0p1cv-weak/src
- tests/mmat-gravity-col-p2lumpedp1
- tests/mmat-gravity-col-p2lumpedp1/src
- tests/mmat-gravity-col-p2p1
- tests/mmat-gravity-col-p2p1/src
- tests/mmat-gravity-col/src
- tests/mmat-impact
- tests/mmat-impact/src
- tests/mmat-interpolation
- tests/mmat-interpolation-lumped
- tests/mmat-interpolation-lumped/src
- tests/mmat-interpolation-pseudo2d-parallel
- tests/mmat-interpolation-pseudo2d-parallel/src
- tests/mmat-interpolation-represcribe
- tests/mmat-interpolation-represcribe/src
- tests/mmat-interpolation/src
- tests/mmat-meniscus
- tests/mmat-meniscus/src
- tests/mmat-shocktube
- tests/mmat-shocktube/src
- tests/mmat-square-blob
- tests/mmat-square-blob/src
- tests/mms_tracer_cv_adv_steady
- tests/mms_tracer_cv_adv_steady/src
- tests/moving_internal_wave_cg
- tests/moving_internal_wave_cg/src
- tests/moving_lock_exchange_2d_dg
- tests/moving_lock_exchange_2d_dg/src
- tests/moving_seiche
- tests/moving_seiche/src
- tests/mphase_test1_2d
- tests/mphase_test1_2d/src
- tests/parallel_adaptivity
- tests/parallel_adaptivity/src
- tests/parallel_dg
- tests/parallel_dg/src
- tests/periodic_advection_1d_cg
- tests/periodic_channel_convergence
- tests/periodic_channel_convergence/src
- tests/photosynthetic_radiation
- tests/photosynthetic_radiation/src
- tests/photosynthetic_radiation_cg
- tests/photosynthetic_radiation_cg/src
- tests/pipe1
- tests/porous_medium_p1p1_2d
- tests/porous_medium_p1p1_2d/src
- tests/porous_medium_p1p1_3d
- tests/porous_medium_p1p1_3d/src
- tests/porous_medium_q1q0
- tests/porous_medium_q1q0/src
- tests/preditor_prey_0d
- tests/preditor_prey_0d/src
- tests/prescribed_adaptivity
- tests/prescribed_adaptivity/src
- tests/prescribed_diffusivity
- tests/prescribed_diffusivity/src
- tests/python_diagnostic_field
- tests/python_diagnostic_field/src
- tests/python_persistent
- tests/raleigh-bernard_2d_dg
- tests/raleigh-bernard_2d_dg/src
- tests/region_id
- tests/region_id/src
- tests/region_id_2d
- tests/region_id_2d/src
- tests/region_id_parallel
- tests/region_id_parallel/src
- tests/rossby_equatorial_soliton
- tests/rossby_equatorial_soliton_dg
- tests/rossby_equatorial_soliton_dg/src
- tests/sc_barotropic_fplane_balance_p1dgp2
- tests/sc_barotropic_fplane_balance_p1dgp2/src
- tests/sc_barotropic_fplane_balance_p1p1
- tests/sc_barotropic_fplane_balance_p1p1/src
- tests/sediment_gravity_current_2D
- tests/sediment_gravity_current_2D/src
- tests/sem
- tests/sem/src
- tests/shoaling_tsunami_legacy
- tests/shoaling_tsunami_legacy/src
- tests/sinking_velocity
- tests/sinking_velocity/src
- tests/sinking_velocity_cv
- tests/sinking_velocity_cv/src
- tests/sloshing_tank_deep
- tests/sloshing_tank_deep/src
- tests/square-2d
- tests/square-2d/src
- tests/square-convection
- tests/square-convection-dg
- tests/square-convection-dg/src
- tests/square-convection-kmk-test
- tests/square-convection-kmk-test/src
- tests/square-convection-p2p1gp3
- tests/square-convection-p2p1gp3/src
- tests/square-convection-parallel
- tests/square-convection-parallel-trivial
- tests/square-convection-parallel-trivial/src
- tests/square-convection-parallel/src
- tests/square-convection/checkpoint
- tests/square-convection/src
- tests/square-dg
- tests/square-dg/src
- tests/square-tiny
- tests/square-tiny-adaptive
- tests/square-tiny-adaptive/src
- tests/square-tiny/src
- tests/standing_wave-cg
- tests/standing_wave-cg/src
- tests/standing_wave-dg
- tests/standing_wave-dg/src
- tests/standing_wave-old
- tests/standing_wave-old/src
- tests/su_stabilisation
- tests/sw_kelvin_wave
- tests/sw_kelvin_wave/src
- tests/taylor-vortex-dg
- tests/taylor-vortex-dg/src
- tests/test_adapt-at-first-time-step
- tests/test_adapt-at-first-time-step/src
- tests/test_advection_diffusion
- tests/test_advection_diffusion/src
- tests/test_advection_stratification_DG
- tests/test_dispersion_relation
- tests/test_pressure_solve_small
- tests/test_shallow_water
- tests/test_shallow_water/src
- tests/tidal_channel
- tests/tidal_channel/src
- tests/top_hat_cg_adapt_consist
- tests/top_hat_cg_adapt_gp
- tests/top_hat_cg_supg
- tests/top_hat_cv
- tests/top_hat_dg
- tests/tracer_absorption_dg
- tests/tracer_absorption_dg/src
- tests/tracer_gyre_dg
- tests/tracer_gyre_dg/src
- tests/tracer_inflow_1d_cg
- tests/tracer_inflow_1d_dg
- tests/tracer_inflow_2d_dg
- tests/tracer_inflow_2d_dg/src
- tests/tracer_inflow_2d_dg_cg
- tests/tracer_inflow_2d_dg_cg/src
- tests/tracer_source_dg
- tests/tracer_source_dg/src
- tests/traffic
- tests/traffic/src
- tests/unresolvable_diagnostic_dependency
- tests/unresolvable_mesh_dependency
- tests/vertical_integration
- tests/vertical_integration/src
- tests/viscosity_2d_dg
- tests/viscosity_2d_dg/src
- tests/viscosity_2d_p0_parallel
- tests/viscosity_2d_p0_parallel/src
- tests/viscosity_2d_p0_serial
- tests/viscosity_2d_p0_serial/src
- tests/water_collapse_2d
- tests/water_collapse_2d_algencan
- tests/water_collapse_pseudo2dadapt
- tests/water_collapse_pseudo2dadapt/src
- tinyxml
- tools
- tools/fluidity.gid
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manual/examples_images/annulus/ArrayFft.png
manual/examples_images/annulus/ArrayHovmueller.png
manual/examples_images/annulus/TemperatureSlices.png
manual/examples_images/lock_exchange/Lag_paths_lock_exchange_labels.png
manual/examples_images/lock_exchange/Mesh_adaptivity_at_1000vtu.png
manual/examples_images/lock_exchange/Mesh_adaptivity_at_1500vtu.png
manual/examples_images/lock_exchange/Temp_at_1000vtu.png
manual/examples_images/lock_exchange/Temp_at_1500vtu.png
manual/examples_images/lock_exchange/le_basic_0_T.png
manual/examples_images/lock_exchange/le_basic_0_mesh_nice.png
manual/examples_images/lock_exchange/le_basic_10_T.png
manual/examples_images/lock_exchange/le_basic_10_mesh.png
manual/examples_images/lock_exchange/le_basic_30_T.png
manual/examples_images/lock_exchange/le_basic_30_mesh.png
manual/examples_images/sediment/sed_conc_20.png
manual/examples_images/sediment/sed_conc_35.png
manual/examples_images/sediment/sed_conc_50.png
manual/examples_images/stokes/stokessquareconvection2_1e4_p2p1.png
manual/geometry_dimension.png
manual/mesh_name.png
manual/misc_images/coordinates.png
manual/misc_images/coordinates.svg
manual/misc_images/manual_title.png
manual/misc_images/manual_title.svg
manual/numerical_discretisation_images/advective_stabilisation/cg.png
manual/numerical_discretisation_images/advective_stabilisation/su.png
manual/numerical_discretisation_images/advective_stabilisation/supg.png
manual/visualisation_and_diagnostics_images/DiagnosticAlgorithms.png
manual/visualisation_and_diagnostics_images/Paraview-filedialogue-timeseries.png
manual/visualisation_and_diagnostics_images/Paraview-opacity.png
manual/visualisation_and_diagnostics_images/Paraview-opacity2.png
manual/visualisation_and_diagnostics_images/Paraview-rescaling-view.png
manual/visualisation_and_diagnostics_images/Paraview-subwindows.png
manual/visualisation_and_diagnostics_images/Paraviewchooseserver.png
manual/visualisation_and_diagnostics_images/Paraviewchooseserver2.png
manual/visualisation_and_diagnostics_images/Paraviewconfigureserverwindow.png
manual/visualisation_and_diagnostics_images/Paraviewconfigureserverwindow2.png
manual/visualisation_and_diagnostics_images/Paraviewconnectbutton.png
manual/visualisation_and_diagnostics_images/Statplot.png
manual/visualisation_and_diagnostics_images/diamond_enable_stat.png
