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~jon-hill/supertree-toolkit/visualisations

Viewing all changes in revision 128.1.2.

Committer: Jon Hill
Date: 2013-09-20 15:30:29 UTC
mto: This revision was merged to the branch mainline in revision 130.
Revision ID: jon.hill@imperial.ac.uk-20130920153029-mus8mmsjefkvinxt

Making tests pass

files modified:
stk/scripts/pages_to_string.py

stk/stk_import_export.py

stk/supertree_toolkit.py

stk/test/data/input/check_data_ind.phyml

stk/test/data/input/check_data_summary.phyml

stk/test/data/input/check_fossils.phyml

stk/test/data/input/check_overlap_ok.phyml

stk/test/data/input/check_taxa.phyml

stk/test/data/input/clean_data.phyml

stk/test/data/input/create_matrix.phyml

stk/test/data/input/full_tree.phyml

stk/test/data/input/lots.xml

stk/test/data/input/non_unique_names.phyml

stk/test/data/input/old_stk_input.phyml

stk/test/data/input/permute_trees.phyml

stk/test/data/input/single_name.xml

stk/test/data/input/single_source.phyml

stk/test/data/input/start_up.phyml

stk/test/data/input/sub_taxa.phyml

stk/test/data/input/two_names.xml

stk/test/data/output/bib_import_single_article.phyml

stk/test/data/output/bib_import_single_article_doi.phyml

stk/test/data/output/bib_import_single_book.phyml

stk/test/data/output/bib_import_utf8.phyml

stk/test/data/output/full_tree.phyml

stk/test/data/output/lots.xml

stk/test/data/output/single_name.xml

stk/test/data/output/two_names.xml

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added added

removed removed

stk/scripts/pages_to_string.py

stk/stk_import_export.py

stk/supertree_toolkit.py

stk/test/data/input/check_data_ind.phyml

stk/test/data/input/check_data_summary.phyml

stk/test/data/input/check_fossils.phyml

stk/test/data/input/check_overlap_ok.phyml

stk/test/data/input/check_taxa.phyml

stk/test/data/input/clean_data.phyml

stk/test/data/input/create_matrix.phyml

stk/test/data/input/full_tree.phyml

stk/test/data/input/lots.xml

stk/test/data/input/non_unique_names.phyml

stk/test/data/input/old_stk_input.phyml

stk/test/data/input/permute_trees.phyml

stk/test/data/input/single_name.xml

stk/test/data/input/single_source.phyml

stk/test/data/input/start_up.phyml

stk/test/data/input/sub_taxa.phyml

stk/test/data/input/two_names.xml

stk/test/data/output/bib_import_single_article.phyml

stk/test/data/output/bib_import_single_article_doi.phyml

stk/test/data/output/bib_import_single_book.phyml

stk/test/data/output/bib_import_utf8.phyml

stk/test/data/output/full_tree.phyml

stk/test/data/output/lots.xml

stk/test/data/output/single_name.xml

stk/test/data/output/two_names.xml

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