~nickpapior/siesta/trunk-kpoint-dos

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
      subroutine recoor(overflow, cell, alat, xa, isa, xmass, na) 

c *******************************************************************
c Reads atomic coordinates and format in which they are given, to be
c transformed into Bohr cartesian for internal handling. 
c It also shifts them all according to AtomicCoordinatesOrigin.
c
c Written by E. Artacho, December 1997, on the original piece of the
c redata subroutine written by P. Ordejon in December 1996.
c ********* INPUT ***************************************************
c logical overflow          : true if some dimension is too small
c integer na                : number of atoms
c double precision cell(3,3): Lattice (supercell) vectors
c double precision alat     : Lattice constant (in Bohr) 
c ********* OUTPUT **************************************************
c double precision xa(3,na) : atomic coordinates in Bohr cartesian
c integer isa(na)           : atomic species of different atoms
c integer xmass(na)         : atomic masses of different atoms
c *******************************************************************

      implicit          none
      logical           overflow
      integer           na
      integer           isa(na)
      double precision  xa(3,na), cell(3,3), alat, xmass(na)

c Internal variables and arrays

      character         acf*22, acf_defect*22
      logical           leqi
      integer           iscale, ia, i, ix, iunit
      double precision  origin(3), xac(3)



c enable FDF input/output

      include 'fdf/fdfdefs.h'

      data origin /3*0.d0/

C format of atomic coordinates

      acf_defect = 'NotScaledCartesianBohr'
      acf = fdf_string('AtomicCoordinatesFormat',acf_defect)
      if (leqi(acf,'NotScaledCartesianBohr')) then
        iscale = 0
        write(6,'(a,a)')
     .   'recoor: Atomic-coordinates input format  = ',
     .   'Cartesian coordinates'
        write(6,'(a,a)')
     .   'recoor:                                    ',
     .   '(in Bohr units)'
      else if (leqi(acf,'NotScaledCartesianAng')) then
        iscale = 1
        write(6,'(a,a)')
     .   'recoor: Atomic-coordinates input format  = ',
     .   'Cartesian coordinates'
        write(6,'(a,a)')
     .   'recoor:                                    ',
     .   '(in Angstroms)'
      else if (leqi(acf,'ScaledCartesian')) then
        if (alat.eq.0.d0) then
           write(6,"(/,2a)") 'recoor: ERROR: Explicit lattice ',
     .       'constant is needed for ScaledCartesian format'
           stop 'recoor: ERROR: Explicit lattice constant needed'
        endif
        iscale = 2
        write(6,'(a,a)')
     .   'recoor: Atomic-coordinates input format  = ',
     .   'Cartesian coordinates'
        write(6,'(a,a)')
     .   'recoor:                                    ',
     .   '(in units of alat)'
      else if (leqi(acf,'ScaledByLatticeVectors') .or. 
     .         leqi(acf,'Fractional') ) then
        if (alat.eq.0.d0) then
           write(6,"(/,2a)") 'recoor: ERROR: Explicit lattice ',
     .       'constant is needed for Fractional format'
           stop 'recoor: ERROR: Explicit lattice constant needed'
        endif
        iscale = 3
        write(6,'(a,a)')
     .   'recoor: Atomic-coordinates input format  = ',
     .   'Ref. to lattice vectors'
      else
        write(6,"(/,'recoor: ',72(1h*))")
        write(6,"('recoor:                  INPUT ERROR')")
        write(6,'(a)') 'recoor: '
        write(6,'(2a)') 'recoor: You must use one of the following',
     .                            ' coordinate scaling options:'
        write(6,'(a)') 'recoor:     - NotScaledCartesianBohr         '
        write(6,'(a)') 'recoor:     - NotScaledCartesianAng          '
        write(6,'(a)') 'recoor:     - ScaledCartesian                '
        write(6,'(2a)') 'recoor:     - ScaledByLatticeVectors ',
     .                                               '(or Fractional)'
        write(6,"('recoor: ',72(1h*))")
        stop 'recoor: ERROR: Wrong atomic-coordinate input format'
      endif


c read atomic coordinates and species

      if (.not. overflow) then

        if ( fdf_block('AtomicCoordinatesAndAtomicSpecies',iunit) )
     .    then
          do ia = 1,na
            read(iunit,*) (xa(i,ia), i=1,3), isa(ia), xmass(ia)
          enddo
        else
          write(6,"(/,'recoor: ',72(1h*))")
          write(6,"('recoor:                  INPUT ERROR')")
          write(6,'(a)')
     .    'recoor:   You must specify the atomic coordinates'
          write(6,"('recoor: ',72(1h*))")
          stop 'recoor: ERROR: Atomic coordinates missing'
        endif

        if ( fdf_block('AtomicCoordinatesOrigin',iunit) ) then
          read(iunit,*) (origin(i),i=1,3)
          do ia = 1,na
            do i = 1,3
              xa(i,ia) = xa(i,ia) + origin(i)
            enddo
          enddo
        endif


c Scale atomic coordinates
c   Coord. option = 0 => Do nothing
c   Coord. option = 1 => Multiply by 1./0.529177 (Ang --> Bohr)
c   Coord. option = 2 => Multiply by lattice constant
c   Coord. option = 3 => Multiply by lattice vectors

        if (iscale .eq. 1) then
          do ia = 1,na
            do ix = 1,3
              xa(ix,ia) = 1.d0 / 0.529177d0 * xa(ix,ia)
            enddo
          enddo
        elseif (iscale .eq. 2) then
          do ia = 1,na
            do ix = 1,3
              xa(ix,ia) = alat * xa(ix,ia)
            enddo
          enddo
        elseif (iscale .eq. 3) then
          do ia = 1,na
            do ix = 1,3
              xac(ix) = xa(ix,ia)
            enddo
            do ix = 1,3
              xa(ix,ia) = cell(ix,1) * xac(1) +
     .                    cell(ix,2) * xac(2) +
     .                    cell(ix,3) * xac(3)
            enddo
          enddo
        endif

        write(6,'(a)') 'recoor: Atomic coordinates (Bohr) and species'
        do ia = 1,na
          write(6,"('recoor: ',i4,2x,3f10.5,i3)")
     .                    ia,(xa(ix,ia),ix=1,3),isa(ia)
        enddo

      endif

      return
      end