~njansson/dolfin/hpc : changes

~njansson/dolfin/hpc » Changes from revision 2668.1.49

Rev	Summary	Authors	Date
2668.1.29	Merge work on AssemblyMatrix from Ilmar (experimental backen... Merge work on AssemblyMatrix from Ilmar (experimental backend for efficient assembly). Benchmark code from Dag Lindbo with modifications added to sandbox.	Anders Logg	16 years ago
2668.1.28	Added test to sandbox/ilmarw. Added test to sandbox/ilmarw.	Ilmar Wilbers	16 years ago
2668.1.27	Added AssemblyFactory. Added AssemblyFactory.	Ilmar Wilbers	16 years ago
2668.1.26	Working on Assembly stuff. Working on Assembly stuff.	Ilmar Wilbers	16 years ago
2668.1.25	Merge. Merge.	Ilmar Wilbers	16 years ago
2668.1.24	Bug fixes. Reading boundary data from mesh file and Bug fixes. Reading boundary data from mesh file and application of boundary conditions seems to work now. Will comment on integration with VMTK in a while.	Anders Logg	16 years ago
2668.1.23	Major cleanup of DirichletBC: Major cleanup of DirichletBC: - Store boundary facets in array, common for all different representations - BCs may now be specified in 3 differenet ways: SubDomain, MeshFunction, or as Mesh data - Should speed up repeated application of BCs - Tested on a few different applications, but please check that nothing broke. In particular, geometric and pointwise application has not been tested.	Anders Logg	16 years ago
2668.1.22	More work on BCs More work on BCs	Anders Logg	16 years ago
2668.1.21	merge merge	Anders Logg	16 years ago
2668.1.20	Set parameters for elasticity demo in main.cpp. Set parameters for elasticity demo in main.cpp.	Garth N. Wells	16 years ago
2668.1.19	Fix in reading in auxiliary mesh data. Mesh functions specif... Fix in reading in auxiliary mesh data. Mesh functions specified in the data section of a mesh XML file may now specify values for only a subset of the entities (for example the entities on the boundary).	Anders Logg	16 years ago
2668.1.18	Added option to set custom linker flags. One can now also us... Added option to set custom linker flags. One can now also use the environment variables CXXFLAGS and LINKFLAGS to set custom compiler/linker flags.	Johannes Ring	16 years ago
2668.1.17	Add support for attaching arbitrarily named data to meshes Add support for attaching arbitrarily named data to meshes in preparation for integration with VMTK. It is now possible to attach an arbitrary number of MeshFunction<uint> to a mesh. Each data set is associated with a user-specified string. Example: MeshFunction<uint>* f = mesh.data().create("boundary indicators", 2); f[0] = 3 f[1] = 3 ... MeshFunction<uint>* g = mesh.data()["boundary indicators"]; File format: <?xml version="1.0" encoding="UTF-8"?> <dolfin xmlns:dolfin="http://www.fenics.org/dolfin/"> <mesh celltype="tetrahedron" dim="3"> <vertices size="4"> <vertex index="0" x="0.000000" y="0.000000" z="0.000000"/> <vertex index="1" x="1.000000" y="0.000000" z="0.000000"/> <vertex index="2" x="0.000000" y="1.000000" z="0.000000"/> <vertex index="3" x="0.000000" y="0.000000" z="1.000000"/> </vertices> <cells size="1"> <tetrahedron index="0" v0="0" v1="1" v2="2" v3="3"/> </cells> <data> <meshfunction name="boundary facet cells" type="uint" dim="2" size="4"> <entity index="0" value="0"/> <entity index="1" value="0"/> <entity index="2" value="0"/> <entity index="3" value="0"/> </meshfunction> <meshfunction name="boundary facet numbers" type="uint" dim="2" size="4"> <entity index="0" value="0"/> <entity index="1" value="1"/> <entity index="2" value="2"/> <entity index="3" value="3"/> </meshfunction> <meshfunction name="boundary indicators" type="uint" dim="2" size="4"> <entity index="0" value="0"/> <entity index="1" value="0"/> <entity index="2" value="1"/> <entity index="3" value="1"/> </meshfunction> </data> </mesh> </dolfin>	Anders Logg	16 years ago
2668.1.16	merge merge	Anders Logg	16 years ago
2668.1.15	Reorganization of data Mesh: Reorganization of data Mesh: - Move topology, geometry, cell_type from MeshData to Mesh - MeshData will be used for storing auxiliary mesh data	Anders Logg	16 years ago
2668.1.14	Add new function DirichletBC::setSubSystem(), allowing modif... Add new function DirichletBC::setSubSystem(), allowing modification of the sub system for which a BC has been set.	Anders Logg	16 years ago
2668.1.13	merge. merge.	Garth N. Wells	16 years ago
2668.1.12	merge. merge.	Garth N. Wells	16 years ago
2668.1.11	merge. merge.	Garth N. Wells	16 years ago
2668.1.10	Remove default_la_types.h, not needed anymore. Remove default_la_types.h, not needed anymore.	Anders Logg	16 years ago