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|
#include "fdebug.h"
#include "confdefs.h"
module zoltan_callbacks
#ifdef HAVE_ZOLTAN
use zoltan
use zoltan_global_variables
! Needed for zoltan_cb_owned_node_count
use halos, only: halo_nowned_nodes, halo_node_owner, halo_node_owners, get_owned_nodes, halo_universal_number
use metric_tools
! Needed for zoltan_cb_get_owned_nodes
! - added get_owned_nodes, halo_universal_number to use halos
use sparse_tools, only: row_length
! Needed for zoltan_cb_get_num_edges
use global_parameters, only: real_size, OPTION_PATH_LEN
use parallel_tools, only: getrank, getnprocs, getprocno, MPI_COMM_FEMTOOLS
! Needed for zoltan_cb_get_edge_list
! - added halo_node_owners to use halos
use mpi_interfaces
! Needed for zoltan_cb_pack_node_sizes
! - added real_size to use global_parameters
use data_structures
! Needed for zoltan_cb_pack_nodes
! - use the whole of data structures now
! Needed for zoltan_cb_pack_field_sizes
use state_module
use zoltan_detectors
! Needed for zoltan_cb_pack_fields
! - added remove_det_from_current_det_list to use diagnostic variables
use detector_data_types, only: detector_type
use detector_tools
use detector_parallel
! Needed for zoltan_cb_unpack_fields
use halos_derivation, only: ele_owner
implicit none
public
contains
function zoltan_cb_owned_node_count(data, ierr) result(count)
integer(zoltan_int) :: count
integer(zoltan_int), dimension(*) :: data ! not used
integer(zoltan_int), intent(out) :: ierr
ewrite(1,*) "In zoltan_cb_owned_node_count"
count = halo_nowned_nodes(zoltan_global_zz_halo)
if (have_option("/mesh_adaptivity/hr_adaptivity/zoltan_options/zoltan_debug")) then
ewrite(1,*) "zoltan_cb_owned_node_count found: ", count, " nodes"
end if
ierr = ZOLTAN_OK
end function zoltan_cb_owned_node_count
subroutine zoltan_cb_get_owned_nodes(data, num_gid_entries, num_lid_entries, global_ids, local_ids, wgt_dim, obj_wgts, ierr)
integer(zoltan_int), dimension(*), intent(in) :: data ! not used
integer(zoltan_int), intent(in) :: num_gid_entries, num_lid_entries
integer(zoltan_int), intent(out), dimension(*) :: global_ids
integer(zoltan_int), intent(out), dimension(*) :: local_ids
integer(zoltan_int), intent(in) :: wgt_dim
real(zoltan_float), intent(out), dimension(*) :: obj_wgts
integer(zoltan_int), intent(out) :: ierr
integer :: count, i
real(zoltan_float) :: max_obj_wgt
ewrite(1,*) "In zoltan_cb_get_owned_nodes"
assert(num_gid_entries == 1)
assert(num_lid_entries == 1)
assert(wgt_dim == 1)
count = halo_nowned_nodes(zoltan_global_zz_halo)
call get_owned_nodes(zoltan_global_zz_halo, local_ids(1:count))
global_ids(1:count) = halo_universal_number(zoltan_global_zz_halo, local_ids(1:count))
if (have_option(trim(zoltan_global_base_option_path) // "/zoltan_debug")) then
ewrite(1,*) "zoltan_cb_get_owned nodes found local_ids: ", local_ids(1:count)
ewrite(1,*) "zoltan_cb_get_owned nodes found global_ids: ", global_ids(1:count)
end if
if(zoltan_global_migrate_extruded_mesh) then
! weight the nodes according to the number of nodes in the column beneath it
max_obj_wgt = 1.0
do i=1,count
obj_wgts(i) = float(row_length(zoltan_global_columns_sparsity, i))
max_obj_wgt = max(max_obj_wgt, obj_wgts(i))
end do
! normalise according to the most nodes in a column
do i=1,count
obj_wgts(i) = obj_wgts(i)/max_obj_wgt
end do
else
do i=1,count
obj_wgts(i) = 1.0
end do
end if
ierr = ZOLTAN_OK
end subroutine zoltan_cb_get_owned_nodes
subroutine zoltan_cb_get_num_edges(data, num_gid_entries, num_lid_entries, num_obj, global_ids, local_ids, num_edges, ierr)
integer(zoltan_int), dimension(*), intent(in) :: data
integer(zoltan_int), intent(in) :: num_gid_entries, num_lid_entries, num_obj
integer(zoltan_int), intent(in), dimension(*) :: global_ids
integer(zoltan_int), intent(in), dimension(*) :: local_ids
integer(zoltan_int), intent(out),dimension(*) :: num_edges
integer(zoltan_int), intent(out) :: ierr
integer :: count
integer :: node
character (len = OPTION_PATH_LEN) :: filename
ewrite(1,*) "In zoltan_cb_get_num_edges"
assert(num_gid_entries == 1)
assert(num_lid_entries == 1)
count = zoltan_global_zz_halo%nowned_nodes
assert(count == num_obj)
do node=1,count
num_edges(node) = row_length(zoltan_global_zz_sparsity_one, local_ids(node))
end do
if (have_option(trim(zoltan_global_base_option_path) // "/zoltan_debug/dump_edge_counts")) then
write(filename, '(A,I0,A)') 'edge_counts_', getrank(),'.dat'
open(666, file = filename)
do node=1,count
write(666,*) num_edges(node)
end do
close(666)
end if
ierr = ZOLTAN_OK
end subroutine zoltan_cb_get_num_edges
subroutine zoltan_cb_get_edge_list(data, num_gid_entries, num_lid_entries, num_obj, global_ids, local_ids, &
& num_edges, nbor_global_id, nbor_procs, wgt_dim, ewgts, ierr)
integer(zoltan_int), intent(in) :: data
integer(zoltan_int), intent(in) :: num_gid_entries, num_lid_entries, num_obj
integer(zoltan_int), intent(in), dimension(*) :: global_ids
integer(zoltan_int), intent(in), dimension(*) :: local_ids
integer(zoltan_int), intent(in), dimension(*) :: num_edges
integer(zoltan_int), intent(out), dimension(*) :: nbor_global_id
integer(zoltan_int), intent(out), dimension(*) :: nbor_procs
integer(zoltan_int), intent(in) :: wgt_dim
real(zoltan_float), intent(out), dimension(*) :: ewgts
integer(zoltan_int), intent(out) :: ierr
integer :: count, err
integer :: node, i, j
integer :: head
integer, dimension(:), pointer :: neighbours
character (len = OPTION_PATH_LEN) :: filename
! variables for recording various element quality functional values
real :: quality, min_quality, my_min_quality
! variables for recording the local maximum/minimum edge weights and local 90th percentile edge weight
real(zoltan_float) :: min_weight, max_weight, ninety_weight, my_max_weight, my_min_weight
integer, dimension(:), pointer :: my_nelist, nbor_nelist
integer :: total_num_edges, my_num_edges
real :: value
ewrite(1,*) "In zoltan_cb_get_edge_list"
assert(num_gid_entries == 1)
assert(num_lid_entries == 1)
assert(wgt_dim == 1)
count = zoltan_global_zz_halo%nowned_nodes
assert(count == num_obj)
my_num_edges = sum(num_edges(1:num_obj))
if (.NOT. zoltan_global_calculate_edge_weights) then
! Three reasons why we might not want to use edge-weighting:
! - last iteration
! hopefully the mesh is of sufficient quality by now we only
! want to optimize the edge cut to minimize halo communication
! - flredecomping
! we don't need to use edge-weights as there's no adapting
! - empty partitions
! when load balancing with edge-weights on we couldn't avoid
! creating empty paritions so try load balancing without them
ewgts(1:my_num_edges) = 1.0
head = 1
do node=1,count
! find nodes neighbours
neighbours => row_m_ptr(zoltan_global_zz_sparsity_one, local_ids(node))
! check the number of neighbours matches the number of edges
assert(size(neighbours) == num_edges(node))
! find global ids for each neighbour
nbor_global_id(head:head+size(neighbours)-1) = halo_universal_number(zoltan_global_zz_halo, neighbours)
! find owning proc for each neighbour
nbor_procs(head:head+size(neighbours)-1) = halo_node_owners(zoltan_global_zz_halo, neighbours) - 1
head = head + size(neighbours)
end do
ierr = ZOLTAN_OK
return
else
call MPI_ALLREDUCE(my_num_edges,total_num_edges,1,MPI_INTEGER,MPI_SUM, &
MPI_COMM_FEMTOOLS,err)
end if
zoltan_global_local_min_quality = 1.0
head = 1
! Aim is to assign high edge weights to poor quality elements
! so that when we load balance poor quality elements are placed
! in the centre of partitions and can be adapted
! loop over the nodes you own
do node=1,count
! find nodes neighbours
neighbours => row_m_ptr(zoltan_global_zz_sparsity_one, local_ids(node))
! check the number of neighbours matches the number of edges
assert(size(neighbours) == num_edges(node))
! find global ids for each neighbour
nbor_global_id(head:head+size(neighbours)-1) = halo_universal_number(zoltan_global_zz_halo, neighbours)
! find owning proc for each neighbour
nbor_procs(head:head+size(neighbours)-1) = halo_node_owners(zoltan_global_zz_halo, neighbours) - 1
! get elements associated with current node
my_nelist => row_m_ptr(zoltan_global_zz_nelist, local_ids(node))
my_min_quality = 1.0
! find quality of worst element node is associated with
do i=1,size(my_nelist)
quality = minval(ele_val(zoltan_global_element_quality, my_nelist(i)))
if (quality .LT. my_min_quality) then
my_min_quality = quality
end if
end do
! loop over all neighbouring nodes
do j=1,size(neighbours)
min_quality = my_min_quality
! get elements associated with neighbour node
nbor_nelist => row_m_ptr(zoltan_global_zz_nelist, neighbours(j))
! loop over all the elements of the neighbour node
do i=1, size(nbor_nelist)
! determine the quality of the element
quality = minval(ele_val(zoltan_global_element_quality, nbor_nelist(i)))
! store the element quality if it's less (worse) than any previous elements
if (quality .LT. min_quality) then
min_quality = quality
end if
end do
! Keep track of the lowest quality element of all those we've looked at
! Will be used in zoltan_drive to calculate a global minimum element quality
if(min_quality .LT. zoltan_global_local_min_quality) then
zoltan_global_local_min_quality = min_quality
end if
! check if the quality is within the tolerance
if (min_quality .GT. zoltan_global_quality_tolerance) then
! if it is
ewgts(head + j - 1) = 1.0
else
! if it's not
ewgts(head + j - 1) = ceiling((1.0 - min_quality) * 20)
end if
end do
head = head + size(neighbours)
end do
zoltan_global_calculated_local_min_quality = .true.
assert(head == sum(num_edges(1:num_obj))+1)
! calculate the local maximum edge weight
my_max_weight = maxval(ewgts(1:head-1))
! calculate the local minimum edge weight
my_min_weight = minval(ewgts(1:head-1))
! calculate global maximum edge weight
call MPI_ALLREDUCE(my_max_weight,max_weight,1,MPI_REAL,MPI_MAX, MPI_COMM_FEMTOOLS,err)
! calculate global minimum edge weight
call MPI_ALLREDUCE(my_min_weight,min_weight,1,MPI_REAL,MPI_MIN, MPI_COMM_FEMTOOLS,err)
! calculate the local 90th percentile edge weight
ninety_weight = max_weight * 0.90
! don't want to adjust the weights if all the elements are of a similar quality
if (min_weight < ninety_weight) then
! make the worst 10% of elements uncuttable
do i=1,head-1
if (ewgts(i) .GT. ninety_weight) then
ewgts(i) = total_num_edges + 1
end if
end do
end if
if (zoltan_global_output_edge_weights) then
head = 1
do node=1,count
neighbours => row_m_ptr(zoltan_global_zz_sparsity_one, local_ids(node))
value = maxval(ewgts(head:head+size(neighbours)-1))
call set(zoltan_global_max_edge_weight_on_node,local_ids(node),value)
head = head + size(neighbours)
end do
end if
if (have_option(trim(zoltan_global_base_option_path) // "/zoltan_debug/dump_edge_weights")) then
write(filename, '(A,I0,A)') 'edge_weights_', getrank(),'.dat'
open(666, file = filename)
do i=1,head-1
write(666,*) ewgts(i)
end do
close(666)
end if
ierr = ZOLTAN_OK
end subroutine zoltan_cb_get_edge_list
! Here is how we pack nodal positions for phase one migration:
! --------------------------------------------------------------------------------------------------------------
! | position | sz of lv-1 nnlist | lv-1 nnlist | sz of lv-2 nnlist | lv-2 nnlist | owners of level-2 nnlist |
! | sz of nelist | nelist | sz of snelist | snelist | snelist ids | containing element of snelist |
! --------------------------------------------------------------------------------------------------------------
subroutine zoltan_cb_pack_node_sizes(data, num_gid_entries, num_lid_entries, num_ids, global_ids, local_ids, sizes, ierr)
integer(zoltan_int), dimension(*), intent(in) :: data
integer(zoltan_int), intent(in) :: num_gid_entries, num_lid_entries, num_ids
integer(zoltan_int), intent(in), dimension(*) :: global_ids, local_ids
integer(zoltan_int), intent(out), dimension(*) :: sizes
integer(zoltan_int), intent(out) :: ierr
integer :: i, node
character (len = OPTION_PATH_LEN) :: filename
ewrite(1,*) "In zoltan_cb_pack_node_sizes"
do i=1,num_ids
node = local_ids(i)
sizes(i) = zoltan_global_zz_positions%dim * real_size + &
1 * integer_size + row_length(zoltan_global_zz_sparsity_one, node) * integer_size + &
1 * integer_size + row_length(zoltan_global_zz_sparsity_two, node) * integer_size * 2 + &
1 * integer_size + row_length(zoltan_global_zz_nelist, node) * integer_size + &
1 * integer_size + key_count(zoltan_global_old_snelist(node)) * integer_size * 3
if(zoltan_global_preserve_mesh_regions) then
sizes(i) = sizes(i) + row_length(zoltan_global_zz_nelist, node) * integer_size
end if
if(zoltan_global_preserve_columns) then
sizes(i) = sizes(i) + integer_size
end if
end do
if (have_option(trim(zoltan_global_base_option_path) // "/zoltan_debug/dump_node_sizes")) then
write(filename, '(A,I0,A)') 'node_sizes_', getrank(),'.dat'
open(666, file = filename)
do i=1,num_ids
write(666,*) sizes(i)
end do
close(666)
end if
ierr = ZOLTAN_OK
end subroutine zoltan_cb_pack_node_sizes
subroutine zoltan_cb_pack_nodes(data, num_gid_entries, num_lid_entries, num_ids, global_ids, local_ids, dest, sizes, idx, buf, ierr)
integer(zoltan_int), dimension(*), intent(in) :: data
integer(zoltan_int), intent(in) :: num_gid_entries, num_lid_entries, num_ids
integer(zoltan_int), intent(in), dimension(*) :: global_ids
integer(zoltan_int), intent(in), dimension(*) :: local_ids
integer(zoltan_int), intent(in), dimension(*) :: dest
integer(zoltan_int), intent(in), dimension(*) :: sizes
integer(zoltan_int), intent(in), dimension(*) :: idx
integer(zoltan_int), intent(out), dimension(*) :: buf
integer(zoltan_int), intent(out) :: ierr
integer :: i, j, node, ratio, head
ewrite(1,*) "In zoltan_cb_pack_nodes"
ratio = real_size / integer_size
assert(int(float(real_size) / float(integer_size)) == ratio) ! that ratio really is an int
do i=1,num_ids
head = idx(i)
node = local_ids(i)
assert(halo_universal_number(zoltan_global_zz_halo, node) == global_ids(i))
do j=1,zoltan_global_zz_positions%dim
buf(head:head+ratio-1) = transfer(node_val(zoltan_global_zz_positions, j, node), buf(head:head+ratio-1))
head = head + ratio
end do
if(zoltan_global_preserve_columns) then
buf(head) = zoltan_global_universal_columns(node)
head = head + 1
end if
buf(head) = row_length(zoltan_global_zz_sparsity_one, node)
head = head + 1
buf(head:head+row_length(zoltan_global_zz_sparsity_one, node)-1) = halo_universal_number(zoltan_global_zz_halo, row_m_ptr(zoltan_global_zz_sparsity_one, node))
head = head + row_length(zoltan_global_zz_sparsity_one, node)
buf(head) = row_length(zoltan_global_zz_sparsity_two, node)
head = head + 1
buf(head:head+row_length(zoltan_global_zz_sparsity_two, node)-1) = halo_universal_number(zoltan_global_zz_halo, row_m_ptr(zoltan_global_zz_sparsity_two, node))
head = head + row_length(zoltan_global_zz_sparsity_two, node)
buf(head:head+row_length(zoltan_global_zz_sparsity_two, node)-1) = halo_node_owners(zoltan_global_zz_halo, row_m_ptr(zoltan_global_zz_sparsity_two, node))
head = head + row_length(zoltan_global_zz_sparsity_two, node)
buf(head) = row_length(zoltan_global_zz_nelist, node)
head = head + 1
buf(head:head+row_length(zoltan_global_zz_nelist,node)-1) = halo_universal_number(zoltan_global_zz_ele_halo, row_m_ptr(zoltan_global_zz_nelist, node))
head = head + row_length(zoltan_global_zz_nelist, node)
if(zoltan_global_preserve_mesh_regions) then
! put in the region_ids in the same amount of space as the nelist - this is complete overkill!
buf(head:head+row_length(zoltan_global_zz_nelist,node)-1) = fetch(zoltan_global_universal_element_number_to_region_id, halo_universal_number(zoltan_global_zz_ele_halo, row_m_ptr(zoltan_global_zz_nelist, node)))
head = head + row_length(zoltan_global_zz_nelist, node)
end if
buf(head) = key_count(zoltan_global_old_snelist(node))
head = head + 1
buf(head:head + key_count(zoltan_global_old_snelist(node)) - 1) = set2vector(zoltan_global_old_snelist(node))
head = head + key_count(zoltan_global_old_snelist(node))
buf(head:head + key_count(zoltan_global_old_snelist(node)) - 1) = fetch(zoltan_global_universal_surface_number_to_surface_id, set2vector(zoltan_global_old_snelist(node)))
head = head + key_count(zoltan_global_old_snelist(node))
buf(head:head + key_count(zoltan_global_old_snelist(node)) - 1) = fetch(zoltan_global_universal_surface_number_to_element_owner, set2vector(zoltan_global_old_snelist(node)))
head = head + key_count(zoltan_global_old_snelist(node))
!assert(head == idx(i) + (sizes(i)/integer_size) - 1)
end do
ierr = ZOLTAN_OK
end subroutine zoltan_cb_pack_nodes
subroutine zoltan_cb_unpack_nodes(data, num_gid_entries, num_ids, global_ids, sizes, idx, buf, ierr)
integer(zoltan_int), dimension(*), intent(inout) :: data
integer(zoltan_int), intent(in) :: num_gid_entries
integer(zoltan_int), intent(in) :: num_ids
integer(zoltan_int), intent(in), dimension(*) :: global_ids
integer(zoltan_int), intent(in), dimension(*) :: sizes
integer(zoltan_int), intent(in), dimension(*) :: idx
integer(zoltan_int), intent(in), dimension(*), target :: buf
integer(zoltan_int), intent(out) :: ierr
integer :: i, ratio, head, sz, j
type(integer_set) :: new_nodes_we_have_recorded, new_nodes_we_still_need, halo_nodes_we_currently_own
type(mesh_type) :: new_mesh
integer, dimension(:), pointer :: neighbours
logical :: changed
integer :: old_local_number, new_local_number, universal_number
real, dimension(zoltan_global_zz_positions%dim) :: new_coord
type(integer_hash_table) :: universal_number_to_old_owner
integer :: old_owner, new_owner
integer, dimension(:), pointer :: current_buf
integer :: rank
ewrite(1,*) "In zoltan_cb_unpack_nodes"
! assert new linear mesh and positions not allocated
assert(.not. associated(new_mesh%refcount))
assert(.not. associated(zoltan_global_new_positions%refcount))
rank = getrank()
! Figure out the nodes we are going to know about
call allocate(zoltan_global_new_nodes)
! All the nodes we currently have and still own, in universal numbering
do i=1,key_count(zoltan_global_nodes_we_are_keeping)
old_local_number = fetch(zoltan_global_nodes_we_are_keeping, i)
call insert(zoltan_global_new_nodes, halo_universal_number(zoltan_global_zz_halo, old_local_number), changed=changed)
end do
! All the nodes we are receiving from other people and are going to own
do i=1,num_ids
call insert(zoltan_global_new_nodes, global_ids(i))
end do
call allocate(universal_number_to_old_owner)
call allocate(halo_nodes_we_currently_own)
! All the halos of (the nodes we currently have and still own), in universal numbering
do i=1,key_count(zoltan_global_nodes_we_are_keeping)
neighbours => row_m_ptr(zoltan_global_zz_sparsity_two, fetch(zoltan_global_nodes_we_are_keeping, i))
do j=1,size(neighbours)
universal_number = halo_universal_number(zoltan_global_zz_halo, neighbours(j))
call insert(zoltan_global_new_nodes, universal_number, changed=changed)
if (changed) then ! so it is a halo node
old_owner = halo_node_owner(zoltan_global_zz_halo, neighbours(j)) - 1
assert(old_owner < getnprocs())
if (old_owner == rank) then
call insert(halo_nodes_we_currently_own, neighbours(j))
end if
call insert(universal_number_to_old_owner, universal_number, old_owner)
end if
end do
end do
! We need to process these too -- nodes we own now, but will
! not own later, and will become our halo nodes.
do i=1,key_count(halo_nodes_we_currently_own)
old_local_number = fetch(halo_nodes_we_currently_own, i)
universal_number = halo_universal_number(zoltan_global_zz_halo, old_local_number)
call insert(zoltan_global_new_nodes, universal_number)
end do
! All the other nodes that will form the halo of the new nodes we are receiving
ratio = real_size / integer_size
do i=1,num_ids
current_buf => buf(idx(i):idx(i) + sizes(i)/integer_size)
head = ratio * zoltan_global_zz_positions%dim + 1
if(zoltan_global_preserve_columns) then
head = head + 1
end if
! current_buf(head) is the size of the level-1 nnlist, which we want to skip over for now
! we will however sum up the sizes so that we can allocate the csr sparsity later
head = head + current_buf(head) + 1
! now current_buf(head) is the size of the level-2 nnlist, which we want to process
! and we will also sum up the sizes so that we can allocate the csr sparsity later
sz = current_buf(head)
do j=1,sz
universal_number = current_buf(head + j)
old_owner = current_buf(head + j + sz) - 1
assert(old_owner < getnprocs())
call insert(zoltan_global_new_nodes, universal_number) ! the sparsity for a node includes itself
call insert(universal_number_to_old_owner, universal_number, old_owner)
end do
end do
! Now zoltan_global_new_nodes implicitly defines a mapping
! between 1 .. key_count(zoltan_global_new_nodes) [these are the new local node numbers]
! and the universal node numbers of the nodes.
! We're going to invert that to create the hash table of universal node numbers -> local node numbers
! to facilitate the transfer of field information later.
call invert_set(zoltan_global_new_nodes, zoltan_global_universal_to_new_local_numbering)
! allocate the new objects
! We know the number of nodes, but not the number of elements .. hmm.
! We will allocate it with 0 elements for now, and work it out when we
! invert the nnlist to compute an enlist later.
call allocate(new_mesh, key_count(zoltan_global_new_nodes), 0, zoltan_global_zz_mesh%shape, trim(zoltan_global_zz_mesh%name))
new_mesh%option_path = zoltan_global_zz_mesh%option_path
if(zoltan_global_preserve_columns) then
allocate(new_mesh%columns(key_count(zoltan_global_new_nodes)))
end if
call allocate(zoltan_global_new_positions, zoltan_global_zz_positions%dim, new_mesh, trim(zoltan_global_zz_positions%name))
zoltan_global_new_positions%option_path = zoltan_global_zz_positions%option_path
call deallocate(new_mesh)
allocate(zoltan_global_new_snelist(key_count(zoltan_global_new_nodes)))
call allocate(zoltan_global_new_snelist)
! aaaand unpack, recording which universal ids we have received
! so that we can figure out which ones we haven't received yet
! so that we can ask their old owner to send on the new details
! a) build a set of the nodes we have recorded
! b) from that, build a set of the nodes we haven't yet recorded
! c) figure out who owns those nodes, so we can build the import list for zoltan
allocate(zoltan_global_new_nelist(key_count(zoltan_global_new_nodes)))
do i=1,key_count(zoltan_global_new_nodes)
call allocate(zoltan_global_new_nelist(i))
end do
call allocate(zoltan_global_new_elements)
call allocate(zoltan_global_new_surface_elements)
call allocate(new_nodes_we_have_recorded)
! Nodes we are keeping
do i=1,key_count(zoltan_global_nodes_we_are_keeping)
old_local_number = fetch(zoltan_global_nodes_we_are_keeping, i)
universal_number = halo_universal_number(zoltan_global_zz_halo, old_local_number)
new_local_number = fetch(zoltan_global_universal_to_new_local_numbering, universal_number)
call insert(new_nodes_we_have_recorded, universal_number)
call set(zoltan_global_new_positions, new_local_number, node_val(zoltan_global_zz_positions, old_local_number))
if(zoltan_global_preserve_columns) then
zoltan_global_new_positions%mesh%columns(new_local_number) = fetch(zoltan_global_universal_to_new_local_numbering_m1d, &
zoltan_global_universal_columns(old_local_number))
end if
! Record the nelist information
neighbours => row_m_ptr(zoltan_global_zz_nelist, old_local_number)
do j=1,size(neighbours)
call insert(zoltan_global_new_nelist(new_local_number), halo_universal_number(zoltan_global_zz_ele_halo, neighbours(j)))
call insert(zoltan_global_new_elements, halo_universal_number(zoltan_global_zz_ele_halo, neighbours(j)))
! don't need to do anything to zoltan_global_universal_element_number_to_region_id because we already have it
end do
! and record the snelist information
do j=1,key_count(zoltan_global_old_snelist(old_local_number))
call insert(zoltan_global_new_snelist(new_local_number), fetch(zoltan_global_old_snelist(old_local_number), j))
call insert(zoltan_global_new_surface_elements, fetch(zoltan_global_old_snelist(old_local_number), j))
! we don't need to add anything to the zoltan_global_universal_surface_number_to_surface_id because we already have it
end do
end do
! Set the positions and nelist of halo_nodes_we_currently_own
do i=1,key_count(halo_nodes_we_currently_own)
old_local_number = fetch(halo_nodes_we_currently_own, i)
universal_number = halo_universal_number(zoltan_global_zz_halo, old_local_number)
new_local_number = fetch(zoltan_global_universal_to_new_local_numbering, universal_number)
call set(zoltan_global_new_positions, new_local_number, node_val(zoltan_global_zz_positions, old_local_number))
if(zoltan_global_preserve_columns) then
zoltan_global_new_positions%mesh%columns(new_local_number) = fetch(zoltan_global_universal_to_new_local_numbering_m1d, &
zoltan_global_universal_columns(old_local_number))
end if
neighbours => row_m_ptr(zoltan_global_zz_nelist, old_local_number)
do j=1,size(neighbours)
call insert(zoltan_global_new_nelist(new_local_number), halo_universal_number(zoltan_global_zz_ele_halo, neighbours(j)))
call insert(zoltan_global_new_elements, halo_universal_number(zoltan_global_zz_ele_halo, neighbours(j)))
! don't need to do anything to zoltan_global_universal_element_number_to_region_id because we already have it
end do
call insert(new_nodes_we_have_recorded, universal_number)
new_owner = fetch(zoltan_global_nodes_we_are_sending, old_local_number)
call insert(zoltan_global_receives(new_owner+1), universal_number)
! and record the snelist information
do j=1,key_count(zoltan_global_old_snelist(old_local_number))
call insert(zoltan_global_new_snelist(new_local_number), fetch(zoltan_global_old_snelist(old_local_number), j))
call insert(zoltan_global_new_surface_elements, fetch(zoltan_global_old_snelist(old_local_number), j))
end do
end do
call deallocate(halo_nodes_we_currently_own)
! Nodes we are gaining
do i=1,num_ids
call insert(new_nodes_we_have_recorded, global_ids(i))
new_local_number = fetch(zoltan_global_universal_to_new_local_numbering, global_ids(i))
new_coord = 0
head = idx(i)
do j=1,zoltan_global_zz_positions%dim
new_coord(j) = transfer(buf(head:head+ratio-1), new_coord(j))
head = head + ratio
end do
call set(zoltan_global_new_positions, new_local_number, new_coord)
if(zoltan_global_preserve_columns) then
zoltan_global_new_positions%mesh%columns(new_local_number) = fetch(zoltan_global_universal_to_new_local_numbering_m1d, buf(head))
head = head + 1
end if
! Record the nelist information
sz = buf(head) ! level-1 nnlist
head = head + sz + 1
sz = buf(head) ! level-2 nnlist
head = head + 2*sz + 1
sz = buf(head) ! nelist
do j=1,sz
call insert(zoltan_global_new_nelist(new_local_number), buf(head + j))
call insert(zoltan_global_new_elements, buf(head + j))
if(zoltan_global_preserve_mesh_regions) then
call insert(zoltan_global_universal_element_number_to_region_id, buf(head + j), buf(head + j + sz))
end if
end do
if(zoltan_global_preserve_mesh_regions) then
head = head + 2*sz + 1
else
head = head + sz + 1
end if
! And record the snelist information
sz = buf(head)
do j=1,sz
call insert(zoltan_global_new_snelist(new_local_number), buf(head + j))
call insert(zoltan_global_universal_surface_number_to_surface_id, buf(head + j), buf(head + j + sz))
call insert(zoltan_global_universal_surface_number_to_element_owner, buf(head + j), buf(head + j + 2*sz))
call insert(zoltan_global_new_surface_elements, buf(head + j))
end do
head = head + 3*sz + 1
end do
! At this point, there might still be nodes that we have not yet recorded but
! we own, so we can fill them in now.
call allocate(new_nodes_we_still_need)
do i=1,key_count(zoltan_global_new_nodes)
universal_number = fetch(zoltan_global_new_nodes, i)
if (has_value(new_nodes_we_have_recorded, universal_number)) cycle
old_owner = fetch(universal_number_to_old_owner, universal_number)
if (old_owner == rank) then
call insert(new_nodes_we_have_recorded, universal_number)
old_local_number = fetch(zoltan_global_universal_to_old_local_numbering, universal_number)
new_local_number = fetch(zoltan_global_universal_to_new_local_numbering, universal_number)
call set(zoltan_global_new_positions, new_local_number, node_val(zoltan_global_zz_positions, old_local_number))
if(zoltan_global_preserve_columns) then
zoltan_global_new_positions%mesh%columns(new_local_number) = &
& fetch(zoltan_global_universal_to_new_local_numbering_m1d, zoltan_global_universal_columns(old_local_number))
end if
! Record the nelist information
neighbours => row_m_ptr(zoltan_global_zz_nelist, old_local_number)
do j=1,size(neighbours)
call insert(zoltan_global_new_nelist(new_local_number), halo_universal_number(zoltan_global_zz_ele_halo, neighbours(j)))
call insert(zoltan_global_new_elements, halo_universal_number(zoltan_global_zz_ele_halo, neighbours(j)))
! don't need to do anything to zoltan_global_universal_element_number_to_region_id because we already have it
end do
! and record the snelist information
do j=1,key_count(zoltan_global_old_snelist(old_local_number))
call insert(zoltan_global_new_snelist(new_local_number), fetch(zoltan_global_old_snelist(old_local_number), j))
call insert(zoltan_global_new_surface_elements, fetch(zoltan_global_old_snelist(old_local_number), j))
! we don't need to add anything to the zoltan_global_universal_surface_number_to_surface_id because we already have it
end do
! and record the node in the zoltan_global_receives
new_owner = fetch(zoltan_global_nodes_we_are_sending, old_local_number)
call insert(zoltan_global_receives(new_owner+1), universal_number)
else
call insert(new_nodes_we_still_need, universal_number)
end if
end do
! And build the import list ...
zoltan_global_my_num_import = key_count(new_nodes_we_still_need)
allocate(zoltan_global_my_import_procs(zoltan_global_my_num_import))
allocate(zoltan_global_my_import_global_ids(zoltan_global_my_num_import))
do i=1,zoltan_global_my_num_import
universal_number = fetch(new_nodes_we_still_need, i)
zoltan_global_my_import_global_ids(i) = universal_number
zoltan_global_my_import_procs(i) = fetch(universal_number_to_old_owner, universal_number)
assert(zoltan_global_my_import_procs(i) /= rank)
end do
call deallocate(new_nodes_we_have_recorded)
call deallocate(new_nodes_we_still_need)
call deallocate(universal_number_to_old_owner)
ierr = ZOLTAN_OK
end subroutine zoltan_cb_unpack_nodes
! Here is how we pack halo nodes for phase two migration:
! -------------------------------------------------------------------------------------
! | position | new owner | size of nelist | nelist | size of snelist |
! | snelist | surface ids | the containing volume element for each surface element |
! -------------------------------------------------------------------------------------
subroutine zoltan_cb_pack_halo_node_sizes(data, num_gid_entries, num_lid_entries, num_ids, global_ids, local_ids, sizes, ierr)
integer(zoltan_int), dimension(*), intent(in) :: data
integer(zoltan_int), intent(in) :: num_gid_entries, num_lid_entries, num_ids
integer(zoltan_int), intent(in), dimension(*) :: global_ids, local_ids
integer(zoltan_int), intent(out), dimension(*) :: sizes
integer(zoltan_int), intent(out) :: ierr
integer :: i, node
character (len = OPTION_PATH_LEN) :: filename
ewrite(1,*) "In zoltan_cb_pack_halo_node_sizes"
do i=1,num_ids
node = fetch(zoltan_global_universal_to_old_local_numbering, global_ids(i))
sizes(i) = zoltan_global_zz_positions%dim * real_size + &
2 * integer_size + row_length(zoltan_global_zz_nelist, node) * integer_size + &
1 * integer_size + key_count(zoltan_global_old_snelist(node)) * 3 * integer_size
if(zoltan_global_preserve_mesh_regions) then
sizes(i) = sizes(i) + row_length(zoltan_global_zz_nelist, node) * integer_size
end if
if(zoltan_global_preserve_columns) then
sizes(i) = sizes(i) + integer_size
end if
end do
if (have_option(trim(zoltan_global_base_option_path) // "/zoltan_debug/dump_halo_node_sizes")) then
write(filename, '(A,I0,A)') 'halo_node_sizes_', getrank(),'.dat'
open(666, file = filename)
do i=1,num_ids
write(666,*) sizes(i)
end do
close(666)
end if
ierr = ZOLTAN_OK
end subroutine zoltan_cb_pack_halo_node_sizes
subroutine zoltan_cb_pack_halo_nodes(data, num_gid_entries, num_lid_entries, num_ids, global_ids, local_ids, dest, sizes, idx, buf, ierr)
integer(zoltan_int), dimension(*), intent(in) :: data
integer(zoltan_int), intent(in) :: num_gid_entries, num_lid_entries, num_ids
integer(zoltan_int), intent(in), dimension(*) :: global_ids
integer(zoltan_int), intent(in), dimension(*) :: local_ids
integer(zoltan_int), intent(in), dimension(*) :: dest
integer(zoltan_int), intent(in), dimension(*) :: sizes
integer(zoltan_int), intent(in), dimension(*) :: idx
integer(zoltan_int), intent(out), dimension(*), target :: buf
integer(zoltan_int), intent(out) :: ierr
integer :: i, j, node, ratio, head, new_owner, rank
integer, dimension(:), pointer :: current_buf
ewrite(1,*) "In zoltan_cb_pack_halo_nodes"
ratio = real_size / integer_size
rank = getrank()
do i=1,num_ids
current_buf => buf(idx(i):idx(i)+sizes(i)/integer_size)
head = 1
node = fetch(zoltan_global_universal_to_old_local_numbering, global_ids(i))
do j=1,zoltan_global_zz_positions%dim
current_buf(head:head+ratio-1) = transfer(node_val(zoltan_global_zz_positions, j, node), current_buf(head:head+ratio-1))
head = head + ratio
end do
if(zoltan_global_preserve_columns) then
current_buf(head) = zoltan_global_universal_columns(node)
head = head + 1
end if
! Now compute the new owner
if (has_key(zoltan_global_nodes_we_are_sending, node)) then
new_owner = fetch(zoltan_global_nodes_we_are_sending, node)
else
new_owner = rank
end if
current_buf(head) = new_owner
head = head + 1
current_buf(head) = row_length(zoltan_global_zz_nelist, node)
head = head + 1
current_buf(head:head+row_length(zoltan_global_zz_nelist, node)-1) = halo_universal_number(zoltan_global_zz_ele_halo, row_m_ptr(zoltan_global_zz_nelist, node))
head = head + row_length(zoltan_global_zz_nelist, node)
if(zoltan_global_preserve_mesh_regions) then
! put in the region_ids in the same amount of space as the nelist - this is complete overkill!
current_buf(head:head+row_length(zoltan_global_zz_nelist, node)-1) = fetch(zoltan_global_universal_element_number_to_region_id, halo_universal_number(zoltan_global_zz_ele_halo, row_m_ptr(zoltan_global_zz_nelist, node)))
head = head + row_length(zoltan_global_zz_nelist, node)
end if
current_buf(head) = key_count(zoltan_global_old_snelist(node))
head = head + 1
current_buf(head:head+key_count(zoltan_global_old_snelist(node))-1) = set2vector(zoltan_global_old_snelist(node))
head = head + key_count(zoltan_global_old_snelist(node))
current_buf(head:head+key_count(zoltan_global_old_snelist(node))-1) = fetch(zoltan_global_universal_surface_number_to_surface_id, set2vector(zoltan_global_old_snelist(node)))
head = head + key_count(zoltan_global_old_snelist(node))
current_buf(head:head+key_count(zoltan_global_old_snelist(node))-1) = fetch(zoltan_global_universal_surface_number_to_element_owner, set2vector(zoltan_global_old_snelist(node)))
head = head + key_count(zoltan_global_old_snelist(node))
!assert(head == (sizes(i)/integer_size)+1)
end do
ierr = ZOLTAN_OK
end subroutine zoltan_cb_pack_halo_nodes
subroutine zoltan_cb_unpack_halo_nodes(data, num_gid_entries, num_ids, global_ids, sizes, idx, buf, ierr)
integer(zoltan_int), dimension(*), intent(inout) :: data
integer(zoltan_int), intent(in) :: num_gid_entries
integer(zoltan_int), intent(in) :: num_ids
integer(zoltan_int), intent(in), dimension(*) :: global_ids
integer(zoltan_int), intent(in), dimension(*) :: sizes
integer(zoltan_int), intent(in), dimension(*) :: idx
integer(zoltan_int), intent(in), dimension(*), target :: buf
integer(zoltan_int), intent(out) :: ierr
integer :: i, j
real, dimension(zoltan_global_zz_positions%dim) :: new_coord
integer :: head
integer :: ratio
integer :: new_local_number, new_owner, sz
ewrite(1,*) "In zoltan_cb_unpack_halo_nodes"
ratio = real_size/integer_size
do i=1,num_ids
new_local_number = fetch(zoltan_global_universal_to_new_local_numbering, global_ids(i))
new_coord = 0
head = idx(i)
do j=1,zoltan_global_zz_positions%dim
new_coord(j) = transfer(buf(head:head+ratio-1), new_coord(j))
head = head + ratio
end do
call set(zoltan_global_new_positions, new_local_number, new_coord)
if(zoltan_global_preserve_columns) then
zoltan_global_new_positions%mesh%columns(new_local_number) = fetch(zoltan_global_universal_to_new_local_numbering_m1d, buf(head))
head = head + 1
end if
new_owner = buf(head)
head = head + 1
! record the nelist information
sz = buf(head)
do j=1,sz
call insert(zoltan_global_new_nelist(new_local_number), buf(head + j))
call insert(zoltan_global_new_elements, buf(head + j))
if(zoltan_global_preserve_mesh_regions) then
call insert(zoltan_global_universal_element_number_to_region_id, buf(head + j), buf(head + j + sz))
end if
end do
if(zoltan_global_preserve_mesh_regions) then
head = head + 2*sz + 1
else
head = head + sz + 1
end if
! and record who owns this in the halo
call insert(zoltan_global_receives(new_owner+1), global_ids(i))
! and record the snelist information
sz = buf(head)
do j=1,sz
call insert(zoltan_global_new_snelist(new_local_number), buf(head + j))
call insert(zoltan_global_universal_surface_number_to_surface_id, buf(head + j), buf(head + j + sz))
call insert(zoltan_global_universal_surface_number_to_element_owner, buf(head + j), buf(head + j + 2*sz))
call insert(zoltan_global_new_surface_elements, buf(head + j))
end do
head = head + 3*sz + 1
end do
ierr = ZOLTAN_OK
end subroutine zoltan_cb_unpack_halo_nodes
subroutine zoltan_cb_pack_field_sizes(data, num_gid_entries, num_lid_entries, num_ids, global_ids, local_ids, sizes, ierr)
integer(zoltan_int), dimension(*), intent(in) :: data
integer(zoltan_int), intent(in) :: num_gid_entries, num_lid_entries, num_ids
integer(zoltan_int), intent(in), dimension(*) :: global_ids, local_ids
integer(zoltan_int), intent(out), dimension(*) :: sizes
integer(zoltan_int), intent(out) :: ierr
type(scalar_field), pointer :: sfield
type(vector_field), pointer :: vfield
type(tensor_field), pointer :: tfield
integer :: state_no, field_no, sz, i
character (len = OPTION_PATH_LEN) :: filename
ewrite(1,*) "In zoltan_cb_pack_field_sizes"
allocate(zoltan_global_to_pack_detectors_list(num_ids))
! if there are some detectors on this process
if (get_num_detector_lists() .GT. 0) then
! create two arrays, one with the number of detectors in each element to be transferred
! and one that holds a list of detectors to be transferred for each element
call prepare_detectors_for_packing(zoltan_global_ndets_in_ele, zoltan_global_to_pack_detectors_list, num_ids, global_ids)
end if
! The person doing this for mixed meshes in a few years time: this is one of the things
! you need to change. Make it look at the loc for each element.
sz = 0
do state_no=1,size(zoltan_global_source_states)
do field_no=1,scalar_field_count(zoltan_global_source_states(state_no))
sfield => extract_scalar_field(zoltan_global_source_states(state_no), field_no)
sz = sz + ele_loc(sfield, 1)
end do
do field_no=1,vector_field_count(zoltan_global_source_states(state_no))
vfield => extract_vector_field(zoltan_global_source_states(state_no), field_no)
sz = sz + ele_loc(vfield, 1) * vfield%dim
end do
do field_no=1,tensor_field_count(zoltan_global_source_states(state_no))
tfield => extract_tensor_field(zoltan_global_source_states(state_no), field_no)
sz = sz + ele_loc(tfield, 1) * product(tfield%dim)
end do
end do
do i=1,num_ids
! fields data + number of detectors in element + detector data +
! reserve space for sz scalar values and for sending old unns of the linear mesh
sizes(i) = (sz * real_size) + real_size + (zoltan_global_ndets_in_ele(i) * zoltan_global_ndata_per_det * real_size) &
+ ele_loc(zoltan_global_zz_mesh, 1) * integer_size
end do
if (have_option(trim(zoltan_global_base_option_path) // "/zoltan_debug/dump_field_sizes")) then
write(filename, '(A,I0,A)') 'field_sizes_', getrank(),'.dat'
open(666, file = filename)
do i=1,num_ids
write(666,*) sizes(i)
end do
close(666)
end if
ierr = ZOLTAN_OK
end subroutine zoltan_cb_pack_field_sizes
subroutine zoltan_cb_pack_fields(data, num_gid_entries, num_lid_entries, num_ids, global_ids, local_ids, dest, sizes, idx, buf, ierr)
integer(zoltan_int), dimension(*), intent(in) :: data
integer(zoltan_int), intent(in) :: num_gid_entries, num_lid_entries, num_ids
integer(zoltan_int), intent(in), dimension(*) :: global_ids
integer(zoltan_int), intent(in), dimension(*) :: local_ids
integer(zoltan_int), intent(in), dimension(*) :: dest
integer(zoltan_int), intent(in), dimension(*) :: sizes
integer(zoltan_int), intent(in), dimension(*) :: idx
integer(zoltan_int), intent(out), dimension(*), target :: buf
integer(zoltan_int), intent(out) :: ierr
real, dimension(:), allocatable :: rbuf ! easier to write reals to real memory
integer :: rhead, i, j, state_no, field_no, loc, sz, total_det_packed
type(scalar_field), pointer :: sfield
type(vector_field), pointer :: vfield
type(tensor_field), pointer :: tfield
integer :: old_universal_element_number, old_local_element_number, dataSize
type(detector_type), pointer :: detector => null(), detector_to_delete => null()
ewrite(1,*) "In zoltan_cb_pack_fields"
total_det_packed=0
do i=1,num_ids
! work back number of scalar values 'sz' from the formula above in zoltan_cb_pack_field_sizes
sz = (sizes(i) - ele_loc(zoltan_global_zz_mesh, old_local_element_number) * integer_size) / real_size
allocate(rbuf(sz))
old_universal_element_number = global_ids(i)
old_local_element_number = fetch(zoltan_global_uen_to_old_local_numbering, old_universal_element_number)
rhead = 1
do state_no=1,size(zoltan_global_source_states)
do field_no=1,scalar_field_count(zoltan_global_source_states(state_no))
sfield => extract_scalar_field(zoltan_global_source_states(state_no), field_no)
loc = ele_loc(sfield, old_local_element_number)
rbuf(rhead:rhead + loc - 1) = ele_val(sfield, old_local_element_number)
rhead = rhead + loc
end do
do field_no=1,vector_field_count(zoltan_global_source_states(state_no))
vfield => extract_vector_field(zoltan_global_source_states(state_no), field_no)
if (index(vfield%name,"Coordinate")==len_trim(vfield%name)-9) cycle
loc = ele_loc(vfield, old_local_element_number)
rbuf(rhead:rhead + loc*vfield%dim - 1) = reshape(ele_val(vfield, old_local_element_number), (/loc*vfield%dim/))
rhead = rhead + loc * vfield%dim
end do
do field_no=1,tensor_field_count(zoltan_global_source_states(state_no))
tfield => extract_tensor_field(zoltan_global_source_states(state_no), field_no)
loc = ele_loc(tfield, old_local_element_number)
rbuf(rhead:rhead + loc*product(tfield%dim) - 1) &
= reshape(ele_val(tfield, old_local_element_number), (/ loc*product(tfield%dim) /))
rhead = rhead + loc * product(tfield%dim)
end do
end do
! packing the number of detectors in the element
rbuf(rhead) = zoltan_global_ndets_in_ele(i)
rhead = rhead + 1
if(zoltan_global_to_pack_detectors_list(i)%length /= 0) then
detector => zoltan_global_to_pack_detectors_list(i)%first
end if
! packing the detectors in that element
do j=1,zoltan_global_ndets_in_ele(i)
! pack the detector
call pack_detector(detector, rbuf(rhead:rhead+zoltan_global_ndata_per_det-1), &
zoltan_global_ndims)
! keep a pointer to the detector to delete
detector_to_delete => detector
! move on our iterating pointer so it's not left on a deleted node
detector => detector%next
! delete the detector we just packed from the to_pack list
call delete(detector_to_delete, zoltan_global_to_pack_detectors_list(i))
rhead = rhead + zoltan_global_ndata_per_det
total_det_packed=total_det_packed+1
end do
assert(rhead==sz+1)
! At the start, write the old unns of this element
loc = ele_loc(zoltan_global_zz_mesh, old_local_element_number)
buf(idx(i):idx(i) + loc -1) = halo_universal_number(zoltan_global_zz_halo, ele_nodes(zoltan_global_zz_mesh, old_local_element_number))
! Determine the size of the real data in integer_size units
dataSize = sz * real_size / integer_size
assert( dataSize==size(transfer(rbuf, buf(idx(i):idx(i)+1))) )
! Now we know the size, we can copy in the right amount of data.
buf(idx(i) + loc:idx(i) + loc + dataSize - 1) = transfer(rbuf, buf(idx(i):idx(i)+1))
deallocate(rbuf)
assert(zoltan_global_to_pack_detectors_list(i)%length == 0)
end do
deallocate(zoltan_global_to_pack_detectors_list)
ewrite(2,*) "Packed ", total_det_packed, " detectors"
ewrite(1,*) "Exiting zoltan_cb_pack_fields"
ierr = ZOLTAN_OK
end subroutine zoltan_cb_pack_fields
function local_vertex_order(old_unns, new_gnns)
! little auxilary function that works out the ordering of the send data
! (which uses the old element ordering) in terms of new local (within the element)
! node numbers of the vertices
! old_unns are the unns of the vertices in the old ordering
! new_gnss are the global (within the local domain) node numbers in the new ordering
integer, dimension(:), intent(in):: old_unns, new_gnns
integer, dimension(size(old_unns)):: local_vertex_order
integer:: i, j, gnn
do i=1, size(old_unns)
gnn = fetch(zoltan_global_universal_to_new_local_numbering, old_unns(i))
do j=1, size(new_gnns)
if (new_gnns(j)==gnn) exit
end do
if (j>size(new_gnns)) then
! node in element send is not in receiving element
ewrite(0,*) i, gnn
ewrite(0,*) old_unns
ewrite(0,*) new_gnns
FLAbort("In zoltan redistribution: something went wrong in element reconstruction")
end if
local_vertex_order(i) = j
end do
end function local_vertex_order
subroutine zoltan_cb_unpack_fields(data, num_gid_entries, num_ids, global_ids, sizes, idx, buf, ierr)
integer(zoltan_int), dimension(*), intent(inout) :: data
integer(zoltan_int), intent(in) :: num_gid_entries
integer(zoltan_int), intent(in) :: num_ids
integer(zoltan_int), intent(in), dimension(*) :: global_ids
integer(zoltan_int), intent(in), dimension(*) :: sizes
integer(zoltan_int), intent(in), dimension(*) :: idx
integer(zoltan_int), intent(in), dimension(*), target :: buf
integer(zoltan_int), intent(out) :: ierr
type(element_type), pointer :: eshape
type(scalar_field), pointer :: sfield
type(vector_field), pointer :: vfield
type(tensor_field), pointer :: tfield
real, dimension(:), allocatable :: rbuf ! easier to read reals
integer, dimension(:), pointer :: nodes
integer, dimension(1:ele_loc(zoltan_global_new_positions,1)):: vertex_order
integer :: rhead, i, state_no, field_no, loc, sz, dataSize
integer :: old_universal_element_number, new_local_element_number
integer :: ndetectors_in_ele, det, new_ele_owner, total_det_unpacked
type(detector_type), pointer :: detector => null()
type(element_type), pointer :: shape => null()
ewrite(1,*) "In zoltan_cb_unpack_fields"
total_det_unpacked=0
do i=1,num_ids
old_universal_element_number = global_ids(i)
new_local_element_number = fetch(zoltan_global_uen_to_new_local_numbering, old_universal_element_number)
loc = ele_loc(zoltan_global_new_positions, new_local_element_number)
! work out the order of the send data, using the unns of the vertices in the send order
! this returns the local (within the element) node numbers of the vertices in send order
vertex_order = local_vertex_order(buf(idx(i):idx(i) + loc -1), ele_nodes(zoltan_global_new_positions, new_local_element_number))
! work back number of scalar values 'sz' from the formula above in zoltan_cb_pack_field_sizes
sz = (sizes(i) - ele_loc(zoltan_global_zz_mesh, new_local_element_number) * integer_size) / real_size
allocate(rbuf(sz))
! Determine the size of the real data in integer_size units
dataSize = sz * real_size / integer_size
rbuf = transfer(buf(idx(i) + loc:idx(i) + loc + dataSize - 1), rbuf, sz)
rhead = 1
do state_no=1, size(zoltan_global_target_states)
do field_no=1,scalar_field_count(zoltan_global_target_states(state_no))
sfield => extract_scalar_field(zoltan_global_target_states(state_no), field_no)
eshape => ele_shape(sfield, new_local_element_number)
nodes => ele_nodes(sfield, new_local_element_number)
loc = size(nodes)
call set(sfield, nodes(ele_local_num(vertex_order, eshape%numbering)), &
rbuf(rhead:rhead + loc - 1))
rhead = rhead + loc
end do
do field_no=1,vector_field_count(zoltan_global_target_states(state_no))
vfield => extract_vector_field(zoltan_global_target_states(state_no), field_no)
if (index(vfield%name,"Coordinate")==len_trim(vfield%name)-9) cycle
eshape => ele_shape(vfield, new_local_element_number)
nodes => ele_nodes(vfield, new_local_element_number)
loc = size(nodes)
call set(vfield, nodes(ele_local_num(vertex_order, eshape%numbering)), &
reshape(rbuf(rhead:rhead + loc*vfield%dim - 1), (/vfield%dim, loc/)))
rhead = rhead + loc * vfield%dim
end do
do field_no=1,tensor_field_count(zoltan_global_target_states(state_no))
tfield => extract_tensor_field(zoltan_global_target_states(state_no), field_no)
eshape => ele_shape(tfield, new_local_element_number)
nodes => ele_nodes(tfield, new_local_element_number)
loc = size(nodes)
call set(tfield, nodes(ele_local_num(vertex_order, eshape%numbering)), &
reshape(rbuf(rhead:rhead + loc*product(tfield%dim) - 1), &
(/tfield%dim(1), tfield%dim(2), loc/)))
rhead = rhead + loc * product(tfield%dim)
end do
end do
ndetectors_in_ele = rbuf(rhead)
rhead = rhead + 1
! check if there are any detectors associated with this element
if(ndetectors_in_ele > 0) then
do det=1,ndetectors_in_ele
! allocate a detector
shape=>ele_shape(zoltan_global_new_positions,1)
call allocate(detector, zoltan_global_ndims, local_coord_count(shape))
! unpack detector information
call unpack_detector(detector, rbuf(rhead:rhead+zoltan_global_ndata_per_det-1), zoltan_global_ndims, &
global_to_local=zoltan_global_uen_to_new_local_numbering, coordinates=zoltan_global_new_positions)
! Make sure the unpacked detector is in this element
assert(new_local_element_number==detector%element)
call insert(detector, zoltan_global_unpacked_detectors_list)
detector => null()
rhead = rhead + zoltan_global_ndata_per_det
total_det_unpacked=total_det_unpacked+1
end do
end if
assert(rhead==sz+1)
deallocate(rbuf)
end do
assert(total_det_unpacked==zoltan_global_unpacked_detectors_list%length)
ewrite(2,*) "Unpacked", zoltan_global_unpacked_detectors_list%length, "detectors"
ewrite(1,*) "Exiting zoltan_cb_unpack_fields"
ierr = ZOLTAN_OK
end subroutine zoltan_cb_unpack_fields
#endif
end module zoltan_callbacks
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