~skimura04/fluidity/fluidityDGSlope : changes

~skimura04/fluidity/fluidityDGSlope » Changes to schemas/mesh_options.rnc from revision 3900

From Revision 3900

Rev	Summary	Authors	Date
3537	Merge in from shallow-water-mfem branch that implements BDM1... Merge in from shallow-water-mfem branch that implements BDM1 and BDFM1 in the shallow-water code. -------------- This line and the following will be ignored ------------- removed: femtools/tests/test_trace.F90 tests/trace_space/ tests/trace_space/Makefile tests/trace_space/src/ tests/trace_space/src/basin.geo tests/trace_space/trace_space.swml tests/trace_space/trace_space.xml added: assemble/Hybridized_Helmholtz.F90 femtools/tests/test_quad_quadrature.F90 main/Hybridized_Helmholtz_Solver.F90 tests/bdfm1_kelvin_wave/ tests/bdfm1_kelvin_wave/Makefile tests/bdfm1_kelvin_wave/bdfm1_kelvin_wave.swml tests/bdfm1_kelvin_wave/src/ tests/bdfm1_kelvin_wave/src/basin.geo tests/div_conforming_projection/ tests/div_conforming_projection/Makefile tests/div_conforming_projection/div_conforming_projection.swml tests/div_conforming_projection/div_conforming_projection_bdfm.swml tests/div_conforming_projection/src/ tests/div_conforming_projection/src/basin1.geo tests/hh_bdfm1/ tests/hh_bdfm1/Makefile tests/hh_bdfm1/hh_bdfm1.xml tests/hh_bdfm1/hh_bdgm1.xml tests/hh_bdfm1/hybridized_helmholtz1.swml tests/hh_bdfm1/hybridized_helmholtz2.swml tests/hh_bdfm1/hybridized_helmholtz3.swml tests/hh_bdfm1/src/ tests/hh_bdfm1/src/basin1.geo tests/hh_bdfm1/src/basin2.geo tests/hh_bdfm1/src/basin3.geo tests/hh_rt0_square/ tests/hh_rt0_square/src/ tests/hh_rt0_square/src/square.geo tests/hybridized_balance/ tests/hybridized_balance/Makefile tests/hybridized_balance/hybridized_balance_bdfm.swml tests/hybridized_balance/hybridized_balance_bdm.swml tests/hybridized_balance/src/ tests/hybridized_balance/src/basin1.geo tests/hybridized_helmholtz/ tests/hybridized_helmholtz/Makefile tests/hybridized_helmholtz/hh.mv2 tests/hybridized_helmholtz/hybridized_helmholtz.xml tests/hybridized_helmholtz/hybridized_helmholtz1.swml tests/hybridized_helmholtz/hybridized_helmholtz2.swml tests/hybridized_helmholtz/hybridized_helmholtz3.swml tests/hybridized_helmholtz/src/ tests/hybridized_helmholtz/src/basin1.geo tests/hybridized_helmholtz/src/basin2.geo tests/hybridized_helmholtz/src/basin3.geo tests/hybridized_helmholtz/src/basin_small.geo renamed: tests/geostrophic_interpolation_sw/balanced.swml => tests/geostrophic_interpolation_sw/balanced.swlml tests/geostrophic_interpolation_sw_consist/balanced.swml => tests/geostrophic_interpolation_sw_consist/balanced.swlml tests/geostrophic_interpolation_sw_dp/balanced.swml => tests/geostrophic_interpolation_sw_dp/balanced.swlml modified: Makefile.in assemble/Makefile.dependencies assemble/Makefile.in femtools/Diagnostic_variables.F90 femtools/Element_Numbering.F90 femtools/Elements.F90 femtools/Fields_Allocates.F90 femtools/Fields_Base.F90 femtools/Futils.F90 femtools/Shape_Functions.F90 femtools/Sparse_Matrices_Fields.F90 femtools/Sparse_Tools.F90 femtools/Transform_elements.F90 femtools/Write_State.F90 main/Makefile.dependencies main/Shallow_Water.F90 preprocessor/Populate_State.F90 schemas/mesh_options.rnc schemas/mesh_options.rng schemas/shallow_water_options.rnc schemas/shallow_water_options.rng tests/geostrophic_interpolation_sw/geostrophic_interpolation_sw.xml tests/geostrophic_interpolation_sw_consist/geostrophic_interpolation_sw_consist.xml tests/geostrophic_interpolation_sw_dp/geostrophic_interpolation_sw_dp.xml tools/Test_Trace_Space.F90 unknown: Makefile config.log config.status lib/ share/ adjoint/Makefile adjoint/tests/Makefile assemble/Makefile assemble/tests/Makefile bathymetry/Makefile bin/diamond bin/fluidity bin/spud-preprocess bin/spud-set climatology/Makefile debug/Makefile decomp/Makefile diagnostics/Diagnostic_Fields_New.F90 diagnostics/Makefile error_measures/Makefile error_measures/tests/Makefile femtools/Makefile femtools/Reference_count_block_csr_matrix.F90 femtools/Reference_count_block_dynamic_csr_matrix.F90 femtools/Reference_count_csr_matrix.F90 femtools/Reference_count_csr_sparsity.F90 femtools/Reference_count_dynamic_csr_matrix.F90 femtools/Reference_count_element_type.F90 femtools/Reference_count_halo_type.F90 femtools/Reference_count_interface_block_csr_matrix.F90 femtools/Reference_count_interface_block_dynamic_csr_matrix.F90 femtools/Reference_count_interface_csr_matrix.F90 femtools/Reference_count_interface_csr_sparsity.F90 femtools/Reference_count_interface_dynamic_csr_matrix.F90 femtools/Reference_count_interface_element_type.F90 femtools/Reference_count_interface_halo_type.F90 femtools/Reference_count_interface_mesh_type.F90 femtools/Reference_count_interface_petsc_csr_matrix.F90 femtools/Reference_count_interface_petsc_numbering_type.F90 femtools/Reference_count_interface_picker_type.F90 femtools/Reference_count_interface_quadrature_type.F90 femtools/Reference_count_interface_scalar_field.F90 femtools/Reference_count_interface_tensor_field.F90 femtools/Reference_count_interface_vector_field.F90 femtools/Reference_count_mesh_type.F90 femtools/Reference_count_petsc_csr_matrix.F90 femtools/Reference_count_petsc_numbering_type.F90 femtools/Reference_count_picker_type.F90 femtools/Reference_count_quadrature_type.F90 femtools/Reference_count_scalar_field.F90 femtools/Reference_count_tensor_field.F90 femtools/Reference_count_vector_field.F90 femtools/tests/Makefile fldecomp/Makefile forward_interfaces/Makefile horizontal_adaptivity/Makefile horizontal_adaptivity/tests/Makefile hyperlight/Makefile include/Judy.h include/Wm4Command.h include/Wm4FoundationLIB.h include/Wm4FoundationPCH.h include/Wm4Intersector.h include/Wm4Intersector1.h include/Wm4IntrBox3Box3.h include/Wm4IntrQuad2Quad2.h include/Wm4IntrTetrahedron3Tetrahedron3.h include/Wm4IntrTriangle2Triangle2.h include/Wm4IntrUtility3.h include/Wm4LinComp.h include/Wm4Math.h include/Wm4MathMCR.h include/Wm4Memory.h include/Wm4Plane3.h include/Wm4Platforms.h include/Wm4Quad2.h include/Wm4Segment3.h include/Wm4System.h include/Wm4THashSet.h include/Wm4THashTable.h include/Wm4TMinHeap.h include/Wm4TSmallUnorderedSet.h include/Wm4TStringHashTable.h include/Wm4TTuple.h include/Wm4Tetrahedron3.h include/Wm4Triangle2.h include/Wm4Triangle3.h include/Wm4Vector2.h include/Wm4Vector3.h include/adapt_integration.mod include/adapt_state_module.mod include/adapt_state_prescribed_module.mod include/adapt_state_unittest_module.mod include/adaptive_interpolation_module.mod include/adaptive_timestepping.mod include/adaptivity_1d.mod include/adjacency_lists.mod include/adjoint_controls.mod include/adjoint_functional_evaluation.mod include/adjoint_functionals.mod include/adjoint_global_variables.mod include/adjoint_main_loop.mod include/adjoint_python.mod include/advection_diffusion_cg.mod include/advection_diffusion_dg.mod include/advection_diffusion_fv.mod include/ale_module.mod include/anisotropic_gradation.mod include/anisotropic_zz_module.mod include/aspect_ratios_module.mod include/assemble_cmc.mod include/auxilaryoptions.mod include/binary_operators.mod include/biology.mod include/bound_field_module.mod include/boundary_conditions.mod include/boundary_conditions_from_options.mod include/boundary_metric.mod include/bounding_box_metric.mod include/bulk_parameterisations.mod include/burgers_adjoint_callbacks.mod include/burgers_adjoint_controls.mod include/burgers_assembly.mod include/c_interfaces.mod include/cgal_tools.mod include/checkpoint.mod include/climatology.mod include/colouring.mod include/compressible_projection.mod include/confdefs.h include/config.h include/conformity_measurement.mod include/conservative_interpolation_module.mod include/coordinates.mod include/coriolis_module.mod include/create_unittest_input.mod include/cv_face_values.mod include/cv_faces.mod include/cv_fields.mod include/cv_options.mod include/cv_shape_functions.mod include/cv_upwind_values.mod include/cvtools.mod include/data_structures.mod include/detector_data_types.mod include/detector_tools.mod include/dg_interpolation_module.mod include/dgtools.mod include/diagnostic_children.mod include/diagnostic_fields.mod include/diagnostic_fields_matrices.mod include/diagnostic_fields_new.mod include/diagnostic_fields_wrapper.mod include/diagnostic_fields_wrapper_new.mod include/diagnostic_source_fields.mod include/diagnostic_variables.mod include/differential_operator_diagnostics.mod include/discrete_properties_module.mod include/divergence_matrix_cg.mod include/divergence_matrix_cv.mod include/drag_module.mod include/dynamic_bin_sort_module.mod include/edge_length_module.mod include/element_numbering.mod include/element_set.mod include/elements.mod include/embed_python.mod include/equation_of_state.mod include/eventcounter.mod include/fefields.mod include/fetools.mod include/field_copies_diagnostics.mod include/field_derivatives.mod include/field_equations_cv.mod include/field_options.mod include/field_preprocessing_module.mod include/field_priority_lists.mod include/fields.mod include/fields_allocates.mod include/fields_base.mod include/fields_calculations.mod include/fields_data_types.mod include/fields_halos.mod include/fields_manipulation.mod include/fldebug.mod include/fldebug_parameters.mod include/fluids_module.mod include/foam_drainage.mod include/foam_flow_module.mod include/form_metric_field.mod include/forward_main_loop.mod include/free_surface_module.mod include/full_projection.mod include/futils.mod include/gent_mcwilliams.mod include/geometric_constraints_metric.mod include/geostrophic_pressure.mod include/global_numbering.mod include/global_parameters.mod include/gls.mod include/gmsh_common.mod include/goal_metric.mod include/goals.mod include/gradation_metric.mod include/gradient_matrix_cg.mod include/grundmann_moeller_quadrature.mod include/hadapt_advancing_front.mod include/hadapt_combine_meshes.mod include/hadapt_extrude.mod include/hadapt_extrude_radially.mod include/hadapt_metric_based_extrude.mod include/halo_data_types.mod include/halos.mod include/halos_allocates.mod include/halos_base.mod include/halos_communications.mod include/halos_debug.mod include/halos_derivation.mod include/halos_diagnostics.mod include/halos_numbering.mod include/halos_ownership.mod include/halos_registration.mod include/halos_repair.mod include/huang_metric_module.mod include/hybridized_helmholtz.mod include/hydrostatic_pressure.mod include/iceshelf_meltrate_surf_normal.mod include/ieee_arithmetic.mod include/implicit_solids.mod include/initialise_fields_module.mod include/integer_hash_table_module.mod include/integer_set_module.mod include/interpolation_error.mod include/interpolation_manager.mod include/interpolation_metric.mod include/interpolation_module.mod include/intersection_finder_module.mod include/k_epsilon.mod include/lagrangian_remap.mod include/les_viscosity_module.mod include/libadjoint_data_callbacks.mod include/limit_metric_module.mod include/linear_shallow_water.mod include/linear_shallow_water_legacy.mod include/linked_lists.mod include/load_netcdf_module.mod include/mangle_dirichlet_rows_module.mod include/mangle_options_tree.mod include/manifold_projections.mod include/matrix_norms.mod include/mba2d_integration.mod include/mba2d_module.mod include/mba3d_integration.mod include/mba_adapt_module.mod include/memory_diagnostics.mod include/merge_tensors.mod include/mesh_diagnostics.mod include/mesh_files.mod include/meshdiagnostics.mod include/meshmovement.mod include/metric_advection.mod include/metric_assemble.mod include/metric_diagnostics.mod include/metric_tools.mod include/mixing_statistics.mod include/momentum_cg.mod include/momentum_dg.mod include/momentum_diagnostic_fields.mod include/momentum_diagnostics.mod include/momentum_equation.mod include/mpi_interfaces.mod include/multigrid.mod include/multimaterial_module.mod include/multiphase_diagnostics.mod include/multiphase_module.mod include/nemo_load_fields_vars.mod include/nemo_states_module.mod include/netcdfwriter.mod include/node_boundary.mod include/node_locking.mod include/node_owner_finder.mod include/node_ownership.mod include/oceansurfaceforcing.mod include/parallel_diagnostics.mod include/parallel_fields.mod include/parallel_tools.mod include/petsc_solve_state_module.mod include/petsc_tools.mod include/physics_from_options.mod include/picker_data_types.mod include/pickers.mod include/pickers_allocates.mod include/pickers_base.mod include/pickers_deallocates.mod include/pickers_inquire.mod include/polynomials.mod include/populate_state_module.mod include/populate_sub_state_module.mod include/porous_media.mod include/profiler.mod include/project_metric_to_surface_module.mod include/pseudo_consistent_interpolation.mod include/pseudo_supermesh.mod include/python_diagnostics.mod include/python_state.mod include/qmesh_module.mod include/quadrature.mod include/quadrature_test.mod include/quicksort.mod include/radiation.mod include/radiation_assemble_solve_group.mod include/radiation_calculate_current_module.mod include/radiation_check_flux_convergence.mod include/radiation_check_options_module.mod include/radiation_copy_flux_values.mod include/radiation_diagnostics.mod include/radiation_energy_group_set_tools.mod include/radiation_extract_flux_field.mod include/radiation_materials.mod include/radiation_materials_create.mod include/radiation_materials_data_types.mod include/radiation_materials_destroy.mod include/radiation_materials_interpolation.mod include/radiation_materials_interpolation_create.mod include/radiation_materials_interpolation_data_types.mod include/radiation_materials_interpolation_destroy.mod include/radiation_materials_interpolation_form_ii.mod include/radiation_materials_interpolation_form_radmat.mod include/radiation_materials_operations.mod include/radiation_materials_read.mod include/radiation_materials_read_format_radmats.mod include/radiation_materials_read_format_radmats_base.mod include/radiation_normalise_flux.mod include/radiation_particle.mod include/radiation_particle_data_type.mod include/radiation_reaction_rate.mod include/radiation_solve_energy_group_iteration.mod include/radiation_solve_module.mod include/radiation_solve_power_iteration.mod include/radiation_solve_scatter_iteration.mod include/read_gmsh.mod include/read_triangle.mod include/recovery_estimator.mod include/reduced_model_runtime.mod include/reference_counting.mod include/reference_meshes.mod include/reserve_state_module.mod include/richardson_metric_module.mod include/rotated_boundary_conditions.mod include/sam_integration.mod include/samplenetcdf.mod include/saturation_distribution_search_hookejeeves.mod include/sediment.mod include/sediment_diagnostics.mod include/shallow_water_adjoint_callbacks.mod include/shallow_water_adjoint_controls.mod include/shape_functions.mod include/shape_functions_test.mod include/signal_vars.mod include/signals.mod include/simple_advection.mod include/simple_advection_b.mod include/simple_advection_d.mod include/simple_diagnostics.mod include/slope_limiters_dg.mod include/smoothing_module.mod include/snapsvd_module.mod include/solenoidal_interpolation_module.mod include/solidconfiguration.mod include/solvers.mod include/sparse_matrices_fields.mod include/sparse_tools.mod include/sparse_tools_petsc.mod include/sparsity_patterns.mod include/sparsity_patterns_meshes.mod include/spatialindex/ include/spontaneous_potentials.mod include/spud include/spud.h include/spud.mod include/spud_enums.h include/state_fields_module.mod include/state_matrices_module.mod include/state_module.mod include/streamfunction.mod include/superconvergence.mod include/supermesh_assembly.mod include/supermesh_construction.mod include/surface_diagnostics.mod include/surface_id_interleaving.mod include/surface_integrals.mod include/surfacelabels.mod include/synthetic_bc.mod include/tensors.mod include/tetrahedron_intersection_module.mod include/tictoc.mod include/tidal_diagnostics.mod include/tidal_module.mod include/timeloop_utilities.mod include/timers.mod include/tinystr.h include/tinyxml.h include/traffic.mod include/transform_elements.mod include/turbine.mod include/unify_meshes_module.mod include/unittest_tools.mod include/upwind_stabilisation.mod include/vector_set.mod include/vector_tools.mod include/vertical_balance_pressure.mod include/vertical_extrapolation_module.mod include/vorticity_diagnostics.mod include/vtk.h include/vtk_cache_module.mod include/vtk_interfaces.mod include/vtkfortran.mod include/wandzura_quadrature.mod include/weak_bcs.mod include/write_gmsh.mod include/write_state_module.mod include/write_triangle.mod include/zoltan_callbacks.mod include/zoltan_detectors.mod include/zoltan_global_variables.mod include/zoltan_integration.mod legacy_reservoir_prototype/Makefile libadaptivity/Makefile libadaptivity/config.log libadaptivity/config.status libadaptivity/adapt3d/Makefile libadaptivity/adapt3d/adaptprogress.mod libadaptivity/adapt3d/addebug.mod libadaptivity/adapt3d/flag_handling.mod libadaptivity/adapt3d/predicted_elements.mod libadaptivity/adapt3d/write_log.mod libadaptivity/adapt3d/include/confdefs.h libadaptivity/include/confdefs.h libadaptivity/include/config.h libadaptivity/include/vtk.h libadaptivity/load_balance/Makefile libadaptivity/load_balance/include/confdefs.h libadaptivity/metric_field/Makefile libadaptivity/tests/Makefile libalgencan/Makefile libjudy/Makefile libjudy/config.h libjudy/config.log libjudy/config.status libjudy/libtool libjudy/make.log libjudy/stamp-h1 libjudy/src/Makefile libjudy/src/obj/ libjudy/src/Judy1/Judy1Tables.c libjudy/src/Judy1/Judy1TablesGen libjudy/src/Judy1/Makefile libjudy/src/JudyCommon/Makefile libjudy/src/JudyHS/Makefile libjudy/src/JudyL/JudyLTables.c libjudy/src/JudyL/JudyLTablesGen libjudy/src/JudyL/Makefile libjudy/src/JudySL/Makefile libmba2d/Makefile libmba2d/mba2d_module.mod libmba3d/Makefile libspud/.libs/ libspud/Makefile libspud/config.log libspud/config.status libspud/fspud.lo libspud/libspud.la libspud/libtool libspud/spud.lo libspud/spud.mod libspud/spud_interfaces.lo libspud/tinystr.lo libspud/tinyxml.lo libspud/tinyxmlerror.lo libspud/tinyxmlparser.lo libspud/bin/spud-preprocess libspud/diamond/build/ libspud/diamond/setup.py libspud/diamond/diamond/plugins.py libspud/diamond/diamond/preprocess.py libspud/examples/Makefile libspud/python/libspud.py libspud/src/tests/Makefile libvtkfortran/Makefile libvtkfortran/make.log libvtkfortran/vtkfortran.mod libvtkfortran/include/confdefs.h libvtkfortran/include/vtk.h libwm/Makefile main/Makefile ocean_forcing/Makefile ocean_forcing/tests/Makefile parameterisation/Makefile parameterisation/tests/Makefile preprocessor/Makefile preprocessor/check.log preprocessor/check_options.F90 preprocessor/register_diagnostics.F90 preprocessor/register_diagnostics.log python/libspud.py python/setup.py qg_strat/Makefile qg_strat/unittests/Makefile radiation/Makefile radiation/tests/Makefile reduced_modelling/Makefile scripts/Makefile sediments/Makefile spatialindex-1.5/.libs/ spatialindex-1.5/Makefile spatialindex-1.5/config.log spatialindex-1.5/config.status spatialindex-1.5/libspatialindex.la spatialindex-1.5/libspatialindex_c.la spatialindex-1.5/libtool spatialindex-1.5/make.log spatialindex-1.5/include/Makefile spatialindex-1.5/include/capi/Makefile spatialindex-1.5/include/tools/Makefile spatialindex-1.5/regressiontest/Makefile spatialindex-1.5/regressiontest/mvrtree/.deps/ spatialindex-1.5/regressiontest/mvrtree/Makefile spatialindex-1.5/regressiontest/rtree/.deps/ spatialindex-1.5/regressiontest/rtree/Makefile spatialindex-1.5/regressiontest/tprtree/.deps/ spatialindex-1.5/regressiontest/tprtree/Makefile spatialindex-1.5/src/Makefile spatialindex-1.5/src/capi/.deps/ spatialindex-1.5/src/capi/.libs/ spatialindex-1.5/src/capi/BoundsQuery.lo spatialindex-1.5/src/capi/CountVisitor.lo spatialindex-1.5/src/capi/DataStream.lo spatialindex-1.5/src/capi/Error.lo spatialindex-1.5/src/capi/IdVisitor.lo spatialindex-1.5/src/capi/Index.lo spatialindex-1.5/src/capi/LeafQuery.lo spatialindex-1.5/src/capi/Makefile spatialindex-1.5/src/capi/ObjVisitor.lo spatialindex-1.5/src/capi/Utility.lo spatialindex-1.5/src/capi/libsidxc.la spatialindex-1.5/src/capi/sidx_api.lo spatialindex-1.5/src/mvrtree/.deps/ spatialindex-1.5/src/mvrtree/.libs/ spatialindex-1.5/src/mvrtree/Index.lo spatialindex-1.5/src/mvrtree/Leaf.lo spatialindex-1.5/src/mvrtree/MVRTree.lo spatialindex-1.5/src/mvrtree/Makefile spatialindex-1.5/src/mvrtree/Node.lo spatialindex-1.5/src/mvrtree/Statistics.lo spatialindex-1.5/src/mvrtree/libmvrtree.la spatialindex-1.5/src/rtree/.deps/ spatialindex-1.5/src/rtree/.libs/ spatialindex-1.5/src/rtree/BulkLoader.lo spatialindex-1.5/src/rtree/Index.lo spatialindex-1.5/src/rtree/Leaf.lo spatialindex-1.5/src/rtree/Makefile spatialindex-1.5/src/rtree/Node.lo spatialindex-1.5/src/rtree/RTree.lo spatialindex-1.5/src/rtree/Statistics.lo spatialindex-1.5/src/rtree/librtree.la spatialindex-1.5/src/spatialindex/.deps/ spatialindex-1.5/src/spatialindex/.libs/ spatialindex-1.5/src/spatialindex/LineSegment.lo spatialindex-1.5/src/spatialindex/Makefile spatialindex-1.5/src/spatialindex/MovingPoint.lo spatialindex-1.5/src/spatialindex/MovingRegion.lo spatialindex-1.5/src/spatialindex/Point.lo spatialindex-1.5/src/spatialindex/Region.lo spatialindex-1.5/src/spatialindex/SpatialIndexImpl.lo spatialindex-1.5/src/spatialindex/TimePoint.lo spatialindex-1.5/src/spatialindex/TimeRegion.lo spatialindex-1.5/src/spatialindex/liblibrary.la spatialindex-1.5/src/storagemanager/.deps/ spatialindex-1.5/src/storagemanager/.libs/ spatialindex-1.5/src/storagemanager/Buffer.lo spatialindex-1.5/src/storagemanager/DiskStorageManager.lo spatialindex-1.5/src/storagemanager/Makefile spatialindex-1.5/src/storagemanager/MemoryStorageManager.lo spatialindex-1.5/src/storagemanager/RandomEvictionsBuffer.lo spatialindex-1.5/src/storagemanager/libstoragemanager.la spatialindex-1.5/src/tools/.deps/ spatialindex-1.5/src/tools/.libs/ spatialindex-1.5/src/tools/Makefile spatialindex-1.5/src/tools/Tools.lo spatialindex-1.5/src/tools/libtools.la spatialindex-1.5/src/tools/rand48.lo spatialindex-1.5/src/tprtree/.deps/ spatialindex-1.5/src/tprtree/.libs/ spatialindex-1.5/src/tprtree/Index.lo spatialindex-1.5/src/tprtree/Leaf.lo spatialindex-1.5/src/tprtree/Makefile spatialindex-1.5/src/tprtree/Node.lo spatialindex-1.5/src/tprtree/Statistics.lo spatialindex-1.5/src/tprtree/TPRTree.lo spatialindex-1.5/src/tprtree/libtprtree.la tests/lauwerier/Makefile tools/Makefile pending merges: Colin Cotter 2011-07-22 [merge] Makefile dependencies, merged from trunk. colin.cotter@impe... 2011-07-22 [merge] Made makefiles. Merged from ... colin.cotter@impe... 2011-07-22 [merge] Pulled from the trunk, and m... Colin Cotter 2011-07-22 Retired trace_space test as it is superceded... Colin Cotter 2011-07-22 Make hybridized_helmholtz_solver get built b... Colin Cotter 2011-07-22 Make hybridized_helmholtz build when shallow... Colin Cotter 2011-07-20 A draft version of insert_trace_meshes that ... Colin Cotter 2011-07-20 Added comments to make_constraints_foo Colin Cotter 2011-07-20 [merge] Merge from the trunk. Colin Cotter 2011-07-20 Changed local up direction so it works on be... Colin Cotter 2011-07-19 Include a projection to the div-conforming s... Colin Cotter 2011-07-19 Removed some debugging ewrites. Colin Cotter 2011-07-19 Commit headline: geostrophic steady state te... Colin Cotter 2011-07-18 Sorted out dependencies for Shallow_Water. Colin Cotter 2011-07-18 Move Hybridized_Helmholtz_Solver.F90 to main... Colin Cotter 2011-07-18 Pushing up changes for dham to see. Colin Cotter 2011-07-18 Trying to set up the projection from streamf... Colin Cotter 2011-07-13 Correct syntax error in schema. Thanks Jemma. Colin Cotter 2011-07-13 Set up a test to verify geostrophic steady s... Colin Cotter 2011-07-13 Hook into shallow water solver. Colin Cotter 2011-07-13 First draft of a balanced initialisation for... Colin Cotter 2011-07-12 Forgot to take curl. Colin Cotter 2011-07-12 Started work on balanced initialisation. Colin Cotter 2011-07-12 Rewrote hybridized solver so that it doesn't... Colin Cotter 2011-07-11 Some fiddling around with the hybridized sol... Colin Cotter 2011-07-11 Added a kelvin wave test, not yet working. Colin Cotter 2011-07-11 Energy is conserved by timestepping method w... Colin Cotter 2011-07-08 Error in normals calculation. Colin Cotter 2011-07-08 Removed various bugs relating to the quadril... Colin Cotter 2011-07-06 First draft of quad trace numbering. Colin Cotter 2011-07-06 [merge] Merged in from fluidity trunk. Colin Cotter 2011-07-06 Added RT0 constraints. Colin Cotter 2011-07-05 Added a unit test to check quadrilateral qua... Colin Cotter 2011-07-04 Shouldn't have added this unit test. Colin Cotter 2011-07-04 Do update correctly for timestepping version. Colin Cotter 2011-07-04 Added a timestepping version - takes the RHS... Colin Cotter 2011-07-01 BDFM1 Helmholtz solver: everything converges... Colin Cotter 2011-07-01 Finished writing constraints code. Created n... Colin Cotter 2011-07-01 Working towards including constraints in the... Colin Cotter 2011-06-29 Reorganised Helmholtz solver a bit. Colin Cotter 2011-06-28 Fixed bug in local_solver. Colin Cotter 2011-06-22 Fixed error in manifold normal calculation t... Colin Cotter 2011-06-22 rewrite assembly of continuity_mat using poi... Colin Cotter 2011-06-21 Fixed normal calculations. Colin Cotter 2011-06-21 Added code to compute the "in-manifold" normal. Colin Cotter 2011-06-21 Checking face_local_nodes whilst we're at it. Colin Cotter 2011-06-20 Some corrections to projection from local to... Colin Cotter 2011-06-20 Fixed segfault caused by mesh_dim/%dim confu... Colin Cotter 2011-06-20 Separate out assembly and reconstruction, an... Colin Cotter 2011-06-10 Some attempts to fix a segfault. Colin Cotter 2011-06-07 Use compute_jacobian to compute detwei as tr... Colin Cotter 2011-06-07 Hybridized Helmholtz solver now runs without... Colin Cotter 2011-06-06 Project velocity field back to cartesian for... Colin Cotter 2011-06-06 Added a hybridized Helmholtz solver tool for... Colin Cotter 2011-06-06 [merge] merge from element-numbering branch. Colin Cotter 2011-06-06 Finish reconstruction of u and D from lambda. colin.cotter@impe... 2011-06-06 Fixed dependencies. Colin Cotter 2011-06-06 Some compile error fixes. Colin Cotter 2011-06-04 [merge] Working on making the Hybridized Hel... colin.cotter@impe... 2011-06-03 [merge] failed attempt at generating... colin.cotter@impe... 2011-06-03 Attempt to get the dependencies right. Colin Cotter 2011-06-04 Making the Helmholtz assembly routines also ... Colin Cotter 2011-06-03 [merge] Merge from element-numbering branch ... Colin Cotter 2011-06-03 Updated local solver and continuity constrai... Colin Cotter 2011-05-25 Completed draft of Hybridized_Helmholtz.F90 Colin Cotter 2011-05-24 Add Hybridized_Helmholtz.F90 to the Makefile. Colin Cotter 2011-05-24 [merge] Merged in from element-numbering bra... Colin Cotter 2011-05-24 Added stuff to assemble the local solver. Colin Cotter 2011-05-10 Added Hybridized_Helmholz.F90 for solving Hy...	Colin Cotter	13 years ago
3489	This merge from element-numbering branch implements trace sp... This merge from element-numbering branch implements trace spaces as a mesh_type. This required to change the interface of allocate_element to allocate_element(element, ele_num, ngi, type, stat) where ele_num is the element numbering type. Therefore I had to change the interface in various places. Added trace spaces as a mesh type to mesh_options.rn, and included it as an option in shallow water options. This hasn't been included in Fluidity yet (could do if there was a demand for it) so no changes to fluidity_options.rn. Added Test_Trace_Space.F90 to tools, which tests allocating the mesh in populate state from options, and then does some numbering checks on the resulting field. Bon appetit!	Colin Cotter	13 years ago
3098	A different way of having mesh dim!=geometry dim. This commi... A different way of having mesh dim!=geometry dim. This commit restores the dimension in the triangle file headers to the geometry dim and instead introduces an option in the schema underneath the external mesh.	jemma	13 years ago
3084	Some tidying of the shallow water code - in particular, the ... Some tidying of the shallow water code - in particular, the embedded manifold mappings are no longer required (they can be included as part of the python function used to set initial conditions, for example). This means that there is now only one Velocty and Coordinate field within the shallow water code, which reduces confustion considerably! In order to make this work, we need to be able to read in 3d coordinate fields but setup 2d vector fields. This is achieved by changing the dimension in the header of the .node file to mean the dimension of the mesh rather than the geometry dimension (which can be accessed from the options tree). The interval script now takes the option --3d so that it can write out 3d coordinate files. This commit will break the shallow_water_mms tests because I'm removing the meshes committed to svn and the Makefile provided actually generates different meshes. Simon is aware of this and will fix...	jemma	13 years ago
2249	Adding a new schemas/ directory following discussion at the ... Adding a new schemas/ directory following discussion at the dev meeting and moving all *.rn[c\|g] files into it. I'm no schema expert so this may well require various changes elsewhere to maintain consistency; please could those who know what they're doing make these changes! Patrick in particular - please update spud accordingly.	tmb1	13 years ago