- Committer: Bazaar Package Importer
- Date: 2010-09-03 17:43:17 UTC
- mfrom: (1.1.10 upstream) (5.1.4 sid)
- Revision ID: james.westby@ubuntu.com-20100903174317-2a9398xuxirb5rby
* New upstream release; the upgrade to BLAST 2.2.24 (from 2.2.21) should
address a formatdb regression. (LP: #586219.)
* Uploading to experimental because squeeze is frozen.
* debian/rules
- Clean up compilation settings; in particular, use dpkg-buildflags rather
than relying on dpkg-buildpackage to have set CFLAGS appropriately.
- (clean): restore expected empty directories if necessary,
for compatibility with VCSes (notably git) that don't track them.
- (install-indep-stamp): adapt to new ncbilogo.ico contents.
- (VIB): add asndisc, as upstream takes care to publish binaries thereof.
* debian/ncbi-tools6.install: likewise add asndisc.
* (debian/).gitignore: Ignore content generated during build.
* debian/lib{ncbi6,vibrant6a}.symbols: update for latest release.
* make/makenet.unx: don't link asndisc against extraneous libraries.
* doc/man/*.1: update for latest release.
* doc/man/asndisc.1: throw together a man page for asndisc.
* doc/man/cleanasn.1: fix SEE ALSO formatting.
* debian/control:
- bump dpkg-dev build-dep to >= 1.15.7 for dpkg-buildflags.
- Standards-Version: 3.9.1 (already compliant).
- note switch to git-mediated Debian-Med team maintenance.
address a formatdb regression. (LP: #586219.)
* Uploading to experimental because squeeze is frozen.
* debian/rules
- Clean up compilation settings; in particular, use dpkg-buildflags rather
than relying on dpkg-buildpackage to have set CFLAGS appropriately.
- (clean): restore expected empty directories if necessary,
for compatibility with VCSes (notably git) that don't track them.
- (install-indep-stamp): adapt to new ncbilogo.ico contents.
- (VIB): add asndisc, as upstream takes care to publish binaries thereof.
* debian/ncbi-tools6.install: likewise add asndisc.
* (debian/).gitignore: Ignore content generated during build.
* debian/lib{ncbi6,vibrant6a}.symbols: update for latest release.
* make/makenet.unx: don't link asndisc against extraneous libraries.
* doc/man/*.1: update for latest release.
* doc/man/asndisc.1: throw together a man page for asndisc.
* doc/man/cleanasn.1: fix SEE ALSO formatting.
* debian/control:
- bump dpkg-dev build-dep to >= 1.15.7 for dpkg-buildflags.
- Standards-Version: 3.9.1 (already compliant).
- note switch to git-mediated Debian-Med team maintenance.
| Filename | Latest Rev | Last Changed | Committer | Comment | Size | ||
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actutils.c |
6 | 15 years ago | Bazaar Package Importer | * debian/control: per Lintian's advice, depend on | 104 KB |
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actutils.h |
6 | 15 years ago | Bazaar Package Importer | * debian/control: per Lintian's advice, depend on | 8.9 KB |
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bandalg0.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 11.5 KB |
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bandalg1.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 7 KB |
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bandalg2.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 15.2 KB |
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bandalg3.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 8.1 KB |
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bandalg4.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 22.5 KB |
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bandalg5.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 9.6 KB |
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bandalgn.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 35 KB |
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bandalgn.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 15 KB |
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blast.c |
2.1.11 | 16 years ago | Bazaar Package Importer | * New upstream release * debian/lib{ncbi6,vibrant6 | 401 KB |
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blast.h |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 34 KB |
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blast_dust.c |
1.1.7 | 16 years ago | Bazaar Package Importer | Import upstream version 6.1.20070822 | 14.9 KB |
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blast_dust.h |
1.1.7 | 16 years ago | Bazaar Package Importer | Import upstream version 6.1.20070822 | 2.1 KB |
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blastconcat.c |
2.1.9 | 16 years ago | Bazaar Package Importer | * debian/control: set Homepage. * debian/{control, | 40.3 KB |
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blastconcat.h |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 2.6 KB |
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blastconcatdef.h |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 7.3 KB |
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blastdef.h |
2.1.9 | 16 years ago | Bazaar Package Importer | * debian/control: set Homepage. * debian/{control, | 76.1 KB |
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blastkar.c |
2.1.9 | 16 years ago | Bazaar Package Importer | * debian/control: set Homepage. * debian/{control, | 158 KB |
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blastkar.h |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 25.8 KB |
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blastool.c |
2.1.9 | 16 years ago | Bazaar Package Importer | * debian/control: set Homepage. * debian/{control, | 209 KB |
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blastpri.h |
2.1.9 | 16 years ago | Bazaar Package Importer | * debian/control: set Homepage. * debian/{control, | 41.5 KB |
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blastutl.c |
2.1.9 | 16 years ago | Bazaar Package Importer | * debian/control: set Homepage. * debian/{control, | 374 KB |
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blfmtutl.c |
7 | 13 years ago | Bazaar Package Importer | * New upstream release; the upgrade to BLAST 2.2.2 | 43.6 KB |
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blfmtutl.h |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 7.6 KB |
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blstxml.asn |
1.1.9 | 15 years ago | Bazaar Package Importer | Import upstream version 6.1.20081116a | 3.4 KB |
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blstxml.h |
1.2.1 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 7.7 KB |
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bxmlobj.c |
1.2.1 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 34.9 KB |
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bxmlobj.h |
1.2.1 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 5.4 KB |
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csim.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 39.2 KB |
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db_list.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 4 KB |
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db_slist.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 11.2 KB |
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dotseq.c |
1.2.1 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 55.4 KB |
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dotseq.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 7.2 KB |
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dust.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 17 KB |
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dust.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 4.2 KB |
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falign.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 71.8 KB |
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g_any.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 11.7 KB |
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gapxdrop.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 89 KB |
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gapxdrop.h |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 12.2 KB |
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impatool.c |
1.2.1 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 23.7 KB |
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kappa.c |
6 | 15 years ago | Bazaar Package Importer | * debian/control: per Lintian's advice, depend on | 101 KB |
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list.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 3.9 KB |
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lnfac.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 139 KB |
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lookup.c |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 44.7 KB |
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lookup.h |
2.1.9 | 16 years ago | Bazaar Package Importer | * debian/control: set Homepage. * debian/{control, | 19.5 KB |
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mbalign.c |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 33.7 KB |
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mbalign.h |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 2.2 KB |
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mblast.c |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 157 KB |
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mblast.h |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 10.3 KB |
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motif.c |
1.1.7 | 16 years ago | Bazaar Package Importer | Import upstream version 6.1.20070822 | 18.5 KB |
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motif.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 2.7 KB |
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ncbisam.c |
2.1.11 | 16 years ago | Bazaar Package Importer | * New upstream release * debian/lib{ncbi6,vibrant6 | 81.7 KB |
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ncbisam.h |
1.2.1 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 13.8 KB |
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ncbisami.h |
1.2.1 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 7.4 KB |
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ncbisort.c |
1.2.1 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 33.2 KB |
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ncbisort.h |
1.2.1 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 8 KB |
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ncbisrti.h |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 6.1 KB |
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pattern1.c |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 63 KB |
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pobutil.c |
1.1.7 | 16 years ago | Bazaar Package Importer | Import upstream version 6.1.20070822 | 51.3 KB |
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pobutil.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 5.9 KB |
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posit.c |
6 | 15 years ago | Bazaar Package Importer | * debian/control: per Lintian's advice, depend on | 232 KB |
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posit.h |
1.1.9 | 15 years ago | Bazaar Package Importer | Import upstream version 6.1.20081116a | 15 KB |
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posit2.c |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 15.9 KB |
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profiles.h |
1.1.2 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20041020 | 5.2 KB |
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pseed3.c |
6 | 15 years ago | Bazaar Package Importer | * debian/control: per Lintian's advice, depend on | 72.7 KB |
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readdb.c |
7 | 13 years ago | Bazaar Package Importer | * New upstream release; the upgrade to BLAST 2.2.2 | 419 KB |
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readdb.h |
5.1.2 | 15 years ago | Bazaar Package Importer | * New upstream release; uploading to unstable now | 75 KB |
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rpsutil.c |
2.1.9 | 16 years ago | Bazaar Package Importer | * debian/control: set Homepage. * debian/{control, | 93.1 KB |
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rpsutil.h |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 13.9 KB |
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salign.c |
5.1.2 | 15 years ago | Bazaar Package Importer | * New upstream release; uploading to unstable now | 55.5 KB |
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salign.h |
1.1.7 | 16 years ago | Bazaar Package Importer | Import upstream version 6.1.20070822 | 1.2 KB |
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salmedia.h |
1.2.1 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 2 KB |
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salptool.c |
6 | 15 years ago | Bazaar Package Importer | * debian/control: per Lintian's advice, depend on | 47.8 KB |
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salptool.h |
6 | 15 years ago | Bazaar Package Importer | * debian/control: per Lintian's advice, depend on | 874 bytes |
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sec.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 13.3 KB |
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sec.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 608 bytes |
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seed.h |
2.1.11 | 16 years ago | Bazaar Package Importer | * New upstream release * debian/lib{ncbi6,vibrant6 | 13.6 KB |
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seg.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 38.1 KB |
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seg.h |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 3.9 KB |
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sim2.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 4 KB |
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sim3.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 24.9 KB |
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sim4.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 85.8 KB |
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simutil.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 33.5 KB |
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simutil.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 18.5 KB |
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slist.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 9.1 KB |
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spidey.c |
2.1.7 | 17 years ago | Bazaar Package Importer | * Re-sync with Debian * Re-add .desktop files from | 358 KB |
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spidey.h |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 21.5 KB |
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splutil.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 4.6 KB |
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splutil.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 1.9 KB |
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stsutil.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 35.2 KB |
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stsutil.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 9.1 KB |
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suggadj.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 50 KB |
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suggest.c |
1.3.2 | 14 years ago | Bazaar Package Importer | Import upstream version 6.1.20090719 | 43.6 KB |
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suggest.h |
1.3.2 | 14 years ago | Bazaar Package Importer | Import upstream version 6.1.20090719 | 7.1 KB |
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suggslp.c |
1.3.2 | 14 years ago | Bazaar Package Importer | Import upstream version 6.1.20090719 | 27.3 KB |
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suggslp.h |
1.3.2 | 14 years ago | Bazaar Package Importer | Import upstream version 6.1.20090719 | 2.4 KB |
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taxblast.c |
6 | 15 years ago | Bazaar Package Importer | * debian/control: per Lintian's advice, depend on | 59.4 KB |
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taxblast.h |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 3 KB |
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terr.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 904 bytes |
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tfuns.c |
1.1.8 | 16 years ago | Bazaar Package Importer | Import upstream version 6.1.20080302 | 31.4 KB |
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tfuns.h |
1.1.8 | 16 years ago | Bazaar Package Importer | Import upstream version 6.1.20080302 | 2.2 KB |
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toasn3.c |
7 | 13 years ago | Bazaar Package Importer | * New upstream release; the upgrade to BLAST 2.2.2 | 173 KB |
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toasn3.h |
1.1.10 | 13 years ago | Bazaar Package Importer | Import upstream version 6.1.20100808 | 8.4 KB |
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toporg.c |
7 | 13 years ago | Bazaar Package Importer | * New upstream release; the upgrade to BLAST 2.2.2 | 144 KB |
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toporg.h |
1.1.10 | 13 years ago | Bazaar Package Importer | Import upstream version 6.1.20100808 | 3.9 KB |
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urkbias.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 17.2 KB |
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urkbias.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 3 KB |
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urkcnsrt.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 40.1 KB |
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urkcnsrt.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 3.5 KB |
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urkdust.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 18.7 KB |
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urkdust.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 3.7 KB |
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urkepi.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 29.3 KB |
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urkepi.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 3.3 KB |
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urkfltr.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 11.7 KB |
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urkfltr.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 3.3 KB |
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urkgraph.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 25 KB |
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urkgraph.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 5.7 KB |
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urkpcc.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 12.5 KB |
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urkpcc.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 3.3 KB |
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urkptpf.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 62.4 KB |
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urkptpf.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 5.9 KB |
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urksigu.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 5.4 KB |
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urksigu.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 2.5 KB |
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urktree.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 34 KB |
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urktree.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 5.8 KB |
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urkutil.c |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 3.5 KB |
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urkutil.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 2.1 KB |
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vecscrn.c |
1.1.6 | 17 years ago | Bazaar Package Importer | Import upstream version 6.1.20061015 | 31.3 KB |
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vecscrn.h |
1 | 22 years ago | Bazaar Package Importer | Import upstream version 6.1.20011220a | 7.8 KB |
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xmlblast.c |
2.1.9 | 16 years ago | Bazaar Package Importer | * debian/control: set Homepage. * debian/{control, | 54.3 KB |
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xmlblast.h |
1.1.1 | 19 years ago | Bazaar Package Importer | Import upstream version 6.1.20040616 | 6.7 KB |
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