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/*
* This file is part of the ESO SINFONI Pipeline
* Copyright (C) 2004,2005 European Southern Observatory
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, 51 Franklin St, Fifth Floor, Boston, MA 02111-1307 USA
*/
/*----------------------------------------------------------------------------
File name : sinfo_badnorm_ini_by_cpl.c
Author : Andrea Modigliani
Created on : Jun 16, 2004
Description : parse cpl input for the search of static bad pixels
---------------------------------------------------------------------------*/
#ifdef HAVE_CONFIG_H
# include <config.h>
#endif
/*---------------------------------------------------------------------------
Includes
---------------------------------------------------------------------------*/
#include <string.h>
#include "sinfo_badnorm_ini_by_cpl.h"
#include "sinfo_raw_types.h"
#include "sinfo_pro_types.h"
#include "sinfo_hidden.h"
#include "sinfo_globals.h"
#include "sinfo_functions.h"
#include "sinfo_file_handling.h"
/*---------------------------------------------------------------------------
Functions private to this module
---------------------------------------------------------------------------*/
static void parse_section_frames(bad_config * cfg,
cpl_frameset* sof, const char* procatg, cpl_frameset** raw, int* status);
static void parse_section_badpix(bad_config * cfg, cpl_parameterlist* cpl_cfg);
static void parse_section_thresh(bad_config * cfg, cpl_parameterlist* cpl_cfg);
/**@{*/
/**
* @addtogroup sinfo_bad_pix_search Bad Pixel Search
*
* TBD
*/
/**
@name sinfo_parse_cpl_input_badnorm
@memo Parse input from CPL (parameters and set of input frames)
to create a blackboard.
@param config cpl parameter list
@param sof cpl frames list
@return 1 newly allocated bad_config blackboard structure.
@doc The requested cpl input is parsed and a blackboard object is created,
then updated accordingly. Returns NULL in case of error.
*/
bad_config *
sinfo_parse_cpl_input_badnorm(cpl_parameterlist * cpl_cfg,
cpl_frameset* sof,
const char* procatg,
cpl_frameset** raw)
{
bad_config * cfg ;
int status = 0;
/* Removed check on ini_file */
/* Removed load of ini file */
cfg = sinfo_bad_cfg_create();
/*
* Perform sanity checks, fill up the structure with what was
* found in the ini file
*/
parse_section_badpix (cfg, cpl_cfg);
parse_section_thresh (cfg, cpl_cfg);
parse_section_frames (cfg, sof, procatg, raw,&status);
if(status>0) {
sinfo_msg_error("parsing cpl input");
sinfo_bad_cfg_destroy(cfg);
cfg = NULL ;
return NULL ;
}
return cfg ;
}
/**
@name parse_section_frames
@memo Parse input frames
@param cfg pointer to bad_config
@param sof cpl frames list
@param procatg PRO.CATG of product
@param raw raw set of frames
@param status status of operation
@return void.
*/
static void
parse_section_frames(bad_config * cfg,
cpl_frameset * sof,
const char * procatg,
cpl_frameset ** raw,
int* status)
{
int i=0;
int nraw = 0;
//char * tag=NULL;
int nraw_good = 0;
cpl_frame* frame=NULL;
char spat_res[FILE_NAME_SZ];
char lamp_status[FILE_NAME_SZ];
char band[FILE_NAME_SZ];
int ins_set=0;
if(strcmp(procatg,PRO_BP_MAP_DI) == 0 ) {
sinfo_extract_raw_frames_type(sof,raw,PRO_MASTER_FLAT_LAMP);
nraw=cpl_frameset_get_size(*raw);
} else if(strcmp(procatg,PRO_BP_MAP_NO) == 0 ) {
sinfo_extract_raw_frames_type(sof,raw,PRO_MASTER_FLAT_LAMP);
nraw=cpl_frameset_get_size(*raw);
} else {
sinfo_extract_raw_frames_type(sof,raw,RAW_FLAT_LAMP);
nraw=cpl_frameset_get_size(*raw);
if (nraw==0) {
sinfo_extract_raw_frames_type(sof,raw,RAW_FLAT_NS);
nraw=cpl_frameset_get_size(*raw);
}
}
if (nraw==0) {
sinfo_extract_raw_frames_type(sof,raw,RAW_FLAT_LAMP);
nraw=cpl_frameset_get_size(*raw);
}
if (nraw==0) {
sinfo_extract_raw_frames_type(sof,raw,RAW_FLAT_NS);
nraw=cpl_frameset_get_size(*raw);
}
if (nraw < 1) {
sinfo_msg_error("Too few (%d) raw frames (%s or %s or %s) present in"
"frameset!Aborting...",nraw,
PRO_MASTER_FLAT_LAMP,RAW_FLAT_LAMP,RAW_FLAT_NS);
(*status)++;
return;
}
/* Removed: get "general:infile" read it, check input sinfo_matrix */
/* Allocate structures to go into the blackboard */
cfg->framelist = cpl_malloc(nraw * sizeof(char*));
/* read input frames */
for (i=0 ; i<nraw ; i++) {
frame = cpl_frameset_get_frame(*raw,i);
//tag = (char*)cpl_frame_get_tag(frame) ;
if(sinfo_file_exists((char*) cpl_frame_get_filename(frame))==1)
{
/* Store file name into framelist */
cfg->framelist[i]=(char*) cpl_frame_get_filename(frame);
nraw_good++;
}
}
if(nraw_good<1) {
sinfo_msg_error("Error: no good raw frame in input, something wrong!");
(*status)++;
return;
}
/* Copy relevant information into the blackboard */
cfg->nframes = nraw_good ;
/* Output */
if (strcmp(procatg,PRO_BP_MAP_NO) == 0) {
strcpy(cfg -> outName, BP_NORM_OUT_FILENAME);
} else if (strcmp(procatg,PRO_BP_MAP_DI) == 0) {
strcpy(cfg -> outName, BP_DIST_OUT_FILENAME);
} else if (strcmp(procatg,PRO_DEFAULT) == 0) {
strcpy(cfg -> outName, BP_NORM_OUT_FILENAME);
} else {
sinfo_msg_error("Error: PRO.CATG %s, not supported!",procatg);
(*status)++;
return;
}
frame = cpl_frameset_get_frame(*raw,0);
sinfo_get_spatial_res(frame,spat_res);
switch(sinfo_frame_is_on(frame))
{
case 0:
strcpy(lamp_status,"on");
break;
case 1:
strcpy(lamp_status,"off");
break;
case -1:
strcpy(lamp_status,"undefined");
break;
default:
strcpy(lamp_status,"undefined");
break;
}
sinfo_get_band(frame,band);
sinfo_msg("Spatial resolution: %s lamp status: %s band: %s \n",
spat_res, lamp_status, band);
sinfo_get_ins_set(band,&ins_set);
return;
}
/**
@name parse_section_badpix
@memo Parse bad pixel parameters
@param cfg pointer to bad_config
@param cpl_cfg input parameter list
@return void.
*/
static void
parse_section_badpix(bad_config * cfg, cpl_parameterlist * cpl_cfg)
{
cpl_parameter *p;
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.sigma_factor");
cfg -> sigmaFactor = cpl_parameter_get_double(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.method_index");
cfg -> methodInd = cpl_parameter_get_int(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.factor");
cfg -> factor = cpl_parameter_get_double(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.iterations");
cfg -> iterations = cpl_parameter_get_int(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.low_rejection");
cfg -> loReject = cpl_parameter_get_double(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.high_rejection");
cfg -> hiReject = cpl_parameter_get_double(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.llx");
cfg -> llx = cpl_parameter_get_int(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.lly");
cfg -> lly = cpl_parameter_get_int(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.urx");
cfg -> urx = cpl_parameter_get_int(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.ury");
cfg -> ury = cpl_parameter_get_int(p);
}
/**
@name parse_section_thresh
@memo Parse threshold parameters
@param cfg pointer to bad_config
@param cpl_cfg input parameter list
@return void.
*/
static void
parse_section_thresh(bad_config * cfg, cpl_parameterlist * cpl_cfg)
{
cpl_parameter *p;
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.threshold_index");
cfg -> threshInd = cpl_parameter_get_bool(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.mean_factor");
cfg -> meanfactor = cpl_parameter_get_double(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.min_cut");
cfg -> mincut = cpl_parameter_get_double(p);
p = cpl_parameterlist_find(cpl_cfg, "sinfoni.bp_norm.max_cut");
cfg -> maxcut = cpl_parameter_get_double(p);
}
/**
@name sinfo_badnorm_free
@memo free a bad_config object
@param cfg pointer to bad_config structure
@return void
*/
void
sinfo_badnorm_free(bad_config ** cfg)
{
if((*cfg) != NULL) {
if((*cfg)->framelist != NULL) {
cpl_free((*cfg)->framelist);
(*cfg)->framelist=NULL;
}
sinfo_bad_cfg_destroy((*cfg));
*cfg =NULL;
}
return;
}
/**@}*/
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