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# $Id: PLATFORMS,v 1.13.2.2 2002/03/18 16:30:38 jason Exp $
Perl general comments:
o Perl 5.00404 and lower often have problems with GDB.t
o Perl on Digital Unix, WindowsNT, and MacOS has been reported
to have problems with the Bio::DB::GDB on module (and
consequently the test GDB.t). This is due to different
versions of HTML::Parser.
o DB.t has intermittent time-out failures (which will most
likely cause tests 3 and/or 27 to fail).
o Index.t will fail if you have an out-of-date DBM file
installation.
Tested systems & OS Specific Comments or Warnings
==================================================
Machine : RedHat Linux 7.2 i686
Compiler: cc
Perl : 5.004-5.6.1
Comments: XML::Writer tests fails (segfault), but do an install/force anyways
and all will work.
Machine : Linux i386
Compiler: cc
Perl : 5.004-5.6.1
Comments: none
Machine : Digital Unix
Compiler: cc
Perl : 5.004
Comments: Failure on GDB.t, possibly due to LWP cissues
Machine : OpenBSD 2.8 i386
Compiler: cc
Perl : 5.6.0
Comments: none
Machine : Solaris 2.8 UltraSparc
Compiler: gcc
Perl : 5.6.0
Comments: The t/flat.t test may report errors being unable to remove a temp directory, these can be safely ignored although an uncessary directory t/tmp may get created as result of this test.
Machine : FreeBSD 4.2 i386
Compiler: gcc
Perl : 5.005_03
Comments: none
Machine : IRIX64 6.5 SGI
Compiler: cc
Perl : 5.004_04
Comments: Some warnings about <HANDLE> which can be safely
ignored. Bio::DB::GenBank/GenPept cannot be used because
IO::String cannot be installed on 5.004. Bio::DB::GDB will
not work on pre 5.005 versions of perl.
Machine : Win32, WinNT i386
Compiler: --
Perl : ActiveState Perl 5.6, 5.5.1
Comments: Be sure that the module DB_File is installed and up-to-date
to allow Bio::Index modules to work properly.
File::Temp potentially broken (causing at least BPpsilite to fail)
Installing ppm's IO-stringy and IO-String and File-Temp are
necessary as well.
See http://bioperl.org/Core/windows-bioperl.html for more info on
installing on Windows.
Machine : MacOS
Compiler: --
Perl : MacPerl
Comments: Issues and possible ways to fix them summarized by Todd Richmond
on the bioperl.org Wiki.
Machine : MacOS X
Compiler: gcc
Perl : 5.6.0
Comments: Steve Cannon has made available Bioperl OS X installation
directions and notes online at the following URL:
http://www.tc.umn.edu/~cann0010/Bioperl_OSX_install.html
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