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~ubuntu-branches/ubuntu/raring/voxbo/raring

Viewing all changes in revision 1.1.1.

Committer: Bazaar Package Importer
Author(s): Michael Hanke
Date: 2011-01-19 14:22:42 UTC
mto: This revision was merged to the branch mainline in revision 3.
Revision ID: james.westby@ubuntu.com-20110119142242-jp20bd9l3q997fci

Tags: upstream-1.8.5~svn1241

Import upstream version 1.8.5~svn1241

files added:
.gitattributes

.gitignore

brainBrowser/bbdialog.cpp

brainBrowser/bbdialog.h

brainBrowser/ui_browseRegion.h

client/client.cpp

client/dbtool.cpp

client/default_scorenames.txt

client/default_types.txt

client/default_views.txt

client/icons/icon_black.png

client/test_scorenames.txt

client/test_types.txt

client/test_views.txt

crunch/newvbmf.cpp

crunch/oldvbmf.cpp

dist/etc/tips.txt

docs/dbguide.odt

docs/voxboguide.odt

fileformats/vbrename.hlp

lib/ff_mat.cpp

lib/mydb.cpp

lib/mydb.h

man

man/dcmsplit.1

man/dicominfo.1

man/vbbatch.1

man/vbfilter.1

man/vbi.1

man/vbim.1

man/vbmaskinfo.1

man/vborient.1

man/vboverlap.1

man/vbrename.1

man/vbsim.1

man/vbtmap.1

man/vbview2.1

man/vbvolregress.1

man/vecview.1

man/voxbo-fileformats.7

man/voxbo.7

munge/contrast.hlp

munge/priority.hlp

munge/vbthresh.cpp

munge/vbthresh.hlp

munge/vbtool.cpp

munge/vbtool.hlp

qtglm/gdw.hlp

qtglm/glm.hlp

qtglm/vbpermgen.cpp

qtglm/vbpermgen.h

qtglm/vbpermgen.hlp

qtglm/vbtcalc.cpp

qtglm/vbtcalc.hlp

qtglm/vecview.hlp

scripts/dcmcrawl.sh

scripts/vb_anonymize.sh

tests/anat.nii.gz

tests/freq

tests/freq/readme.txt

tests/glm1/runtest2.sh

tests/glm1/runtest3.sh

tests/mask.nii.gz

vbview/icons/m_aux.png

vbview/icons/m_corr.png

vbview/icons/m_glm.png

vbview/icons/m_mask.png

vbview/icons/m_stat.png

vbview/icons/m_struct.png

vbview/icons/t_aux.png

vbview/icons/t_corr.png

vbview/icons/t_glm.png

vbview/icons/t_mask.png

vbview/icons/t_stat.png

vbview/icons/t_struct.png

vbwidgets/runseq.cpp

vbwidgets/runseq.h

vbwidgets/threshcalc.cpp

vbwidgets/threshcalc.h

files removed:
client/addUser.cpp

client/addUser.h

client/addUser.ui

client/admin_user.ui

client/edit_record.ui

client/layoutdemo.cpp

client/main.cpp

client/main.ui

client/newmain.cpp

client/qt_login.cpp

client/qt_login.h

client/qt_login.ui

client/todo.txt

dist/etc/jobtypes/permfinish.vjt

dist/etc/jobtypes/permstep.vjt

dist/etc/jobtypes/permstep2.vjt

docs/devguide.odt

docs/guide.odt

env

env/namespace.db

env/patient.db

env/patientlist.db

env/patientscores.sdb

env/permissions.db

env/region_name.db

env/region_relation.db

env/scorenames.db

env/scorenames.txt

env/scorevalues.db

env/session.db

env/study.db

env/synonym.db

env/system.db

env/types.txt

env/user.db

env/views.txt

lib/filecheck.cpp

lib/filecheck.h

lib/myDB.cpp

lib/myDB.h

lib/stringtokenizer.cpp

lib/stringtokenizer.h

lib/vec.cpp

munge/vbthreshcalc.cpp

munge/vbthreshcalc.hlp

munge/vbts.cpp

munge/vbts.hlp

qtglm/permgen.cpp

qtglm/permgen.h

qtglm/permgenmain.cpp

qtglm/tcalc.cpp

qtglm/tcalc.h

qtglm/tcalcmain.cpp

scheduler/idlfree.cpp

scheduler/processvbx.cpp

scheduler/vbconf.cpp

scheduler/vblock.cpp

scheduler/vbprefsutil.cpp

scheduler/vbsingle.cpp

scheduler/vbsubmit.cpp

scheduler/vbsubmit_private.cpp

stand_alone/permstart.cpp

stand_alone/vbthresh.cpp

stand_alone/vbthresh.h

stand_alone/vecregress.cpp

tests/glm1/setup.sh

vbview/vbscale.cpp

files modified:
COPYING

INSTALL

Makefile

README

brainBrowser/Makefile

brainBrowser/br_util.cpp

brainBrowser/br_util.h

client/Makefile

client/client.qrc

client/dbclient.cpp

client/dbclient.h

client/dbdialogs.cpp

client/dbdialogs.h

client/dbmainwindow.cpp

client/dbqbrain.cpp

client/dbqbrain.h

client/dbqcombo.cpp

client/dbqcombo.h

client/dbqimage.cpp

client/dbqimage.h

client/dbqlineedit.cpp

client/dbqlineedit.h

client/dbqscorebox.cpp

client/dbqscorebox.h

client/dbqstub.cpp

client/dbqtextedit.cpp

client/dbqtextedit.h

client/dbqtimedate.cpp

client/dbqtimedate.h

client/dbview.cpp

client/dbview.h

client/icons/a_logo.png

configure.py

crunch/norm.cpp

crunch/realign.cpp

crunch/resample.cpp

crunch/vbmakefilter.cpp

crunch/vbmakeglm.cpp

crunch/vbmm2.cpp

db_import/buildNameSpace.cpp

db_import/buildRelation.cpp

db_import/readBrodmann.cpp

db_import/readHierarchy.cpp

db_import/readMarianna.cpp

db_import/readSynonym.cpp

db_import/scoreConfig.cpp

dbutil/Makefile

dbutil/cpDB.cpp

dbutil/delRecord.cpp

dbutil/initPerm.cpp

dbutil/initScoreNames.cpp

dbutil/initScoreValues.cpp

dbutil/mvDB.cpp

dbutil/showPatientScores.cpp

dbutil/showScoreValues.cpp

dbutil/showSystem.cpp

dist/etc/defaults

dist/etc/maps.txt

dist/etc/servers/sample

docs/dbschema.odt

fileformats/Makefile

fileformats/analyzeinfo.cpp

fileformats/dcmsplit.cpp

fileformats/dcmsplit.hlp

fileformats/dicominfo.cpp

fileformats/ffinfo.cpp

fileformats/vbrename.cpp

gdscript/gds.cpp

gdscript/gds_main.cpp

lib/Makefile

lib/analyze.cpp

lib/bdb_tab.cpp

lib/bdb_tab.h

lib/cube.cpp

lib/db_util.cpp

lib/db_util.h

lib/dbdata.cpp

lib/dbdata.h

lib/dbserver.h

lib/dicom.cpp

lib/dicom.h

lib/ff_cub.cpp

lib/ff_ref.cpp

lib/ff_tes.cpp

lib/glm_stats.cpp

lib/glmutil.cpp

lib/glmutil.h

lib/imageutils.cpp

lib/imageutils.h

lib/makestatcub.cpp

lib/makestatcub.h

lib/mat.cpp

lib/matfile.cpp

lib/mydefs.cpp

lib/mydefs.h

lib/nifti.cpp

lib/regress1.cpp

lib/stats.cpp

lib/statthreshold.cpp

lib/statthreshold.h

lib/tes.cpp

lib/test.cpp

lib/tokenlist.cpp

lib/tokenlist.h

lib/trialavg.cpp

lib/vb_vector.cpp

lib/vb_vector.h

lib/vbexecdef.cpp

lib/vbff.cpp

lib/vbhost.cpp

lib/vbio.cpp

lib/vbio.h

lib/vbjobspec.cpp

lib/vbjobspec.h

lib/vbprefs.cpp

lib/vbprefs.h

lib/vbpreplib.cpp

lib/vbrc.py

lib/vbsequence.cpp

lib/vbutil.cpp

lib/vbutil.h

lib/vbversion.h

lib/vbx.cpp

make_stuff.txt

munge/Makefile

munge/calcperf.cpp

munge/setorigin.cpp

munge/sumrfx.cpp

munge/vb2tes.cpp

munge/vbbatch.cpp

munge/vbbatch.hlp

munge/vbcmp.cpp

munge/vbcmp.hlp

munge/vbconv.cpp

munge/vbfilter.cpp

munge/vbhdr.cpp

munge/vbi.cpp

munge/vbim.cpp

munge/vbim.hlp

munge/vbim_examples.hlp

munge/vbimagemunge.cpp

munge/vbmaskcompare.cpp

munge/vbmaskinfo.cpp

munge/vbmaskinfo.hlp

munge/vbmaskmunge.cpp

munge/vbmerge4d.cpp

munge/vbmunge.cpp

munge/vborient.cpp

munge/vboverlap.cpp

munge/vbprep.cpp

munge/vbprep.hlp

munge/vbregion.cpp

munge/vbse.cpp

munge/vbshift.cpp

munge/vbsim.cpp

munge/vbsim.hlp

munge/vbsmooth.cpp

munge/vbvec2hdr.cpp

munge/vecsplit.cpp

qa/vbqa.cpp

qtglm/Makefile

qtglm/gdw.cpp

qtglm/gdw.h

qtglm/gdw_main.cpp

qtglm/gheaderinfo.cpp

qtglm/glm.cpp

qtglm/glm.h

qtglm/glm_main.cpp

qtglm/glm_tab3.cpp

qtglm/glm_tab3.h

qtglm/vecview.cpp

qtvlsm/Makefile

qtvlsm/vbvlsm.cpp

resample/resample.cpp

scheduler/Makefile

scheduler/vbsrvd.cpp

scheduler/voxbo.cpp

scheduler/voxbo.h

scheduler/voxq.cpp

scripts/Makefile

scripts/makehelp.sh

scripts/makevlsm.sh

scripts/paasify.sh

scripts/runperms.sh

scripts/spm8_coreg.sh

scripts/spm8_realign.sh

scripts/spm8_reslice.sh

scripts/spm8_segment.sh

scripts/spm8_warp.sh

server/server.cpp

stand_alone/Makefile

stand_alone/calc_gs_ps.cpp

stand_alone/calcgs.cpp

stand_alone/comptraces.cpp

stand_alone/koshutil.cpp

stand_alone/koshutil.h

stand_alone/makematk.cpp

stand_alone/makematkg.cpp

stand_alone/perm.cpp

stand_alone/perm.h

stand_alone/permstep.cpp

stand_alone/regression.cpp

stand_alone/regression.h

stand_alone/sliceacq.cpp

stand_alone/tesjoin.cpp

stand_alone/tesplit.cpp

stand_alone/time_series_avg.cpp

stand_alone/time_series_avg.h

stand_alone/timeseries.cpp

stand_alone/utils.cpp

stand_alone/vbpermmat.cpp

stand_alone/vbregress.cpp

stats/glminfo.cpp

stats/vbdumpstats.cpp

stats/vbfdr.cpp

stats/vbfdr.hlp

stats/vbmakeregress.cpp

stats/vbmakeregress.hlp

stats/vbmakeresid.cpp

stats/vbperminfo.cpp

stats/vbperminfo.hlp

stats/vbpermvec.cpp

stats/vbscoregen.cpp

stats/vbstatmap.cpp

stats/vbstatmap.hlp

stats/vbtmap.cpp

stats/vbvolregress.cpp

stats/vbvolregress.hlp

stats/vbxts.cpp

stats/vbxts.hlp

tests/README

tests/glm1/clean.sh

tests/glm1/runtest1.sh

tests/testscript.ssd

tests/testscript.sss

tests/vbpreptest.vbp

utils/Makefile

utils/gcheck.cpp

utils/sortmvpm.cpp

utils/vbcfx.cpp

utils/vbfit.cpp

vbsequence/Makefile

vbsequence/print_dataset.cpp

vbsequence/submit_sequence.cpp

vbsequence/vbsequenceitem.cpp

vbsequence/vbsequencescene.cpp

vbsequence/vbsequenceview.cpp

vbview/Makefile

vbview/icons/visible.png

vbview/rsrc.qrc

vbview/vb_render.cpp

vbview/vbqt_masker.cpp

vbview/vbqt_masker.h

vbview/vbri.cpp

vbview/vbview.cpp

vbview/vbview.h

vbview/vbview.hlp

vbview/vbview_io.cpp

vbview/vbview_layers.cpp

vbview/vbview_render.cpp

vbview/vbview_ts.cpp

vbview/vbviewmain.cpp

vbview/vbviewmain.h

vbwidgets/Makefile

vbwidgets/covariates.cpp

vbwidgets/dir.cpp

vbwidgets/dir.h

vbwidgets/fileview.cpp

vbwidgets/fileview.h

vbwidgets/myboxes.h

vbwidgets/plotscreen.cpp

vbwidgets/vbcontrast.cpp

vbwidgets/vbcontrast.h

Show diffs side-by-side

added added

removed removed

brainBrowser/Makefile

brainBrowser/bbdialog.cpp

brainBrowser/bbdialog.h

brainBrowser/br_util.cpp

brainBrowser/br_util.h

brainBrowser/ui_browseRegion.h

client/Makefile

client/addUser.cpp

client/addUser.h

client/addUser.ui

client/admin_user.ui

client/client.cpp

client/client.qrc

client/dbclient.cpp

client/dbclient.h

client/dbdialogs.cpp

client/dbdialogs.h

client/dbmainwindow.cpp

client/dbqbrain.cpp

client/dbqbrain.h

client/dbqcombo.cpp

client/dbqcombo.h

client/dbqimage.cpp

client/dbqimage.h

client/dbqlineedit.cpp

client/dbqlineedit.h

client/dbqscorebox.cpp

client/dbqscorebox.h

client/dbqstub.cpp

client/dbqtextedit.cpp

client/dbqtextedit.h

client/dbqtimedate.cpp

client/dbqtimedate.h

client/dbtool.cpp

client/dbview.cpp

client/dbview.h

client/default_scorenames.txt

client/default_types.txt

client/default_views.txt

client/edit_record.ui

client/icons/a_logo.png

client/icons/icon_black.png

client/layoutdemo.cpp

client/main.cpp

client/newmain.cpp

client/qt_login.cpp

client/qt_login.h

client/qt_login.ui

client/test_scorenames.txt

client/test_types.txt

client/test_views.txt

client/todo.txt

crunch/newvbmf.cpp

crunch/norm.cpp

crunch/oldvbmf.cpp

crunch/realign.cpp

crunch/resample.cpp

crunch/vbmakefilter.cpp

crunch/vbmakeglm.cpp

crunch/vbmm2.cpp

db_import/buildNameSpace.cpp

db_import/buildRelation.cpp

db_import/readBrodmann.cpp

db_import/readHierarchy.cpp

db_import/readMarianna.cpp

db_import/readSynonym.cpp

db_import/scoreConfig.cpp

dbutil/Makefile

dbutil/cpDB.cpp

dbutil/delRecord.cpp

dbutil/initPerm.cpp

dbutil/initScoreNames.cpp

dbutil/initScoreValues.cpp

dbutil/mvDB.cpp

dbutil/showPatientScores.cpp

dbutil/showScoreValues.cpp

dbutil/showSystem.cpp

dist/etc/defaults

dist/etc/jobtypes/permfinish.vjt

dist/etc/jobtypes/permstep.vjt

dist/etc/jobtypes/permstep2.vjt

dist/etc/maps.txt

dist/etc/servers/sample

dist/etc/tips.txt

docs/dbguide.odt

docs/dbschema.odt

docs/devguide.odt

docs/voxboguide.odt

env/namespace.db

env/patientlist.db

env/patientscores.sdb

env/permissions.db

env/region_name.db

env/region_relation.db

env/scorenames.db

env/scorenames.txt

env/scorevalues.db

fileformats/Makefile

fileformats/analyzeinfo.cpp

fileformats/dcmsplit.cpp

fileformats/dcmsplit.hlp

fileformats/dicominfo.cpp

fileformats/ffinfo.cpp

fileformats/vbrename.cpp

fileformats/vbrename.hlp

gdscript/gds.cpp

gdscript/gds_main.cpp

lib/analyze.cpp

lib/bdb_tab.cpp

lib/db_util.cpp

lib/filecheck.cpp

lib/filecheck.h

lib/glm_stats.cpp

lib/glmutil.cpp

lib/imageutils.cpp

lib/imageutils.h

lib/makestatcub.cpp

lib/makestatcub.h

lib/matfile.cpp

lib/regress1.cpp

lib/statthreshold.cpp

lib/statthreshold.h

lib/stringtokenizer.cpp

lib/stringtokenizer.h

lib/tokenlist.cpp

lib/tokenlist.h

lib/trialavg.cpp

lib/vb_vector.cpp

lib/vb_vector.h

lib/vbexecdef.cpp

lib/vbjobspec.cpp

lib/vbjobspec.h

lib/vbprefs.cpp

lib/vbpreplib.cpp

lib/vbsequence.cpp

lib/vbversion.h

man/dicominfo.1

man/vbmaskinfo.1

man/vboverlap.1

man/vbvolregress.1

man/voxbo-fileformats.7

munge/calcperf.cpp

munge/contrast.hlp

munge/priority.hlp

munge/setorigin.cpp

munge/sumrfx.cpp

munge/vb2tes.cpp

munge/vbbatch.cpp

munge/vbbatch.hlp

munge/vbcmp.cpp

munge/vbcmp.hlp

munge/vbconv.cpp

munge/vbfilter.cpp

munge/vbhdr.cpp

munge/vbim_examples.hlp

munge/vbimagemunge.cpp

munge/vbmaskcompare.cpp

munge/vbmaskinfo.cpp

munge/vbmaskinfo.hlp

munge/vbmaskmunge.cpp

munge/vbmerge4d.cpp

munge/vbmunge.cpp

munge/vborient.cpp

munge/vboverlap.cpp

munge/vbprep.cpp

munge/vbprep.hlp

munge/vbregion.cpp

munge/vbshift.cpp

munge/vbsim.cpp

munge/vbsim.hlp

munge/vbsmooth.cpp

munge/vbthresh.cpp

munge/vbthresh.hlp

munge/vbthreshcalc.cpp

munge/vbthreshcalc.hlp

munge/vbtool.cpp

munge/vbtool.hlp

munge/vbvec2hdr.cpp

munge/vecsplit.cpp

qtglm/gdw_main.cpp

qtglm/gheaderinfo.cpp

qtglm/glm_main.cpp

qtglm/glm_tab3.cpp

qtglm/glm_tab3.h

qtglm/permgen.cpp

qtglm/permgen.h

qtglm/permgenmain.cpp

qtglm/tcalc.cpp

qtglm/tcalcmain.cpp

qtglm/vbpermgen.cpp

qtglm/vbpermgen.h

qtglm/vbpermgen.hlp

qtglm/vbtcalc.cpp

qtglm/vbtcalc.hlp

qtglm/vecview.cpp

qtglm/vecview.hlp

qtvlsm/Makefile

qtvlsm/vbvlsm.cpp

resample/resample.cpp

scheduler/Makefile

scheduler/idlfree.cpp

scheduler/processvbx.cpp

scheduler/vbconf.cpp

scheduler/vblock.cpp

scheduler/vbprefsutil.cpp

scheduler/vbsingle.cpp

scheduler/vbsrvd.cpp

scheduler/vbsubmit.cpp

scheduler/vbsubmit_private.cpp

scheduler/voxbo.cpp

scheduler/voxbo.h

scheduler/voxq.cpp

scripts/Makefile

scripts/dcmcrawl.sh

scripts/makehelp.sh

scripts/makevlsm.sh

scripts/paasify.sh

scripts/runperms.sh

scripts/spm8_coreg.sh

scripts/spm8_realign.sh

scripts/spm8_reslice.sh

scripts/spm8_segment.sh

scripts/spm8_warp.sh

scripts/vb_anonymize.sh

server/server.cpp

stand_alone/Makefile

stand_alone/calc_gs_ps.cpp

stand_alone/calcgs.cpp

stand_alone/comptraces.cpp

stand_alone/koshutil.cpp

stand_alone/koshutil.h

stand_alone/makematk.cpp

stand_alone/makematkg.cpp

stand_alone/perm.cpp

stand_alone/perm.h

stand_alone/permstart.cpp

stand_alone/permstep.cpp

stand_alone/regression.cpp

stand_alone/regression.h

stand_alone/sliceacq.cpp

stand_alone/tesjoin.cpp

stand_alone/tesplit.cpp

stand_alone/time_series_avg.cpp

stand_alone/time_series_avg.h

stand_alone/timeseries.cpp

stand_alone/utils.cpp

stand_alone/vbpermmat.cpp

stand_alone/vbregress.cpp

stand_alone/vbthresh.cpp

stand_alone/vbthresh.h

stand_alone/vecregress.cpp

stats/glminfo.cpp

stats/vbdumpstats.cpp

stats/vbfdr.cpp

stats/vbfdr.hlp

stats/vbmakeregress.cpp

stats/vbmakeregress.hlp

stats/vbmakeresid.cpp

stats/vbperminfo.cpp

stats/vbperminfo.hlp

stats/vbpermvec.cpp

stats/vbscoregen.cpp

stats/vbstatmap.cpp

stats/vbstatmap.hlp

stats/vbtmap.cpp

stats/vbvolregress.cpp

stats/vbvolregress.hlp

stats/vbxts.cpp

stats/vbxts.hlp

tests/anat.nii.gz

tests/freq/readme.txt

tests/glm1/clean.sh

tests/glm1/runtest1.sh

tests/glm1/runtest2.sh

tests/glm1/runtest3.sh

tests/glm1/setup.sh

tests/mask.nii.gz

tests/testscript.ssd

tests/testscript.sss

tests/vbpreptest.vbp

utils/gcheck.cpp

utils/sortmvpm.cpp

utils/vbcfx.cpp

utils/vbfit.cpp

vbsequence/Makefile

vbsequence/print_dataset.cpp

vbsequence/submit_sequence.cpp

vbsequence/vbsequenceitem.cpp

vbsequence/vbsequencescene.cpp

vbsequence/vbsequenceview.cpp

vbview/Makefile

vbview/icons/m_aux.png

vbview/icons/m_corr.png

vbview/icons/m_glm.png

vbview/icons/m_mask.png

vbview/icons/m_stat.png

vbview/icons/m_struct.png

vbview/icons/t_aux.png

vbview/icons/t_corr.png

vbview/icons/t_glm.png

vbview/icons/t_mask.png

vbview/icons/t_stat.png

vbview/icons/t_struct.png

vbview/icons/visible.png

vbview/rsrc.qrc

vbview/vb_render.cpp

vbview/vbqt_masker.cpp

vbview/vbqt_masker.h

vbview/vbri.cpp

vbview/vbscale.cpp

vbview/vbview.cpp

vbview/vbview.h

vbview/vbview.hlp

vbview/vbview_io.cpp

vbview/vbview_layers.cpp

vbview/vbview_render.cpp

vbview/vbview_ts.cpp

vbview/vbviewmain.cpp

vbview/vbviewmain.h

vbwidgets/Makefile

vbwidgets/covariates.cpp

vbwidgets/dir.cpp

vbwidgets/dir.h

vbwidgets/fileview.cpp

vbwidgets/fileview.h

vbwidgets/myboxes.h

vbwidgets/plotscreen.cpp

vbwidgets/runseq.cpp

vbwidgets/runseq.h

vbwidgets/threshcalc.cpp

vbwidgets/threshcalc.h

vbwidgets/vbcontrast.cpp

vbwidgets/vbcontrast.h

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