~ubuntu-branches/ubuntu/saucy/gfan/saucy-proposed

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
#include "determinantpoly.h"

#include  <iostream>
#include "printer.h"
#include "buchberger.h"
#include "wallideal.h"
#include "termorder.h"
#include "tropical2.h"
#include "tropicaldeterminant.h"
#include "log.h"

using namespace std;

static list<int> interval(int n, bool sqrt)
{
        list<int> ret;
        for(int i=0;((sqrt)?i*i:i)<n;i++)ret.push_back(i);
        return ret;
}


class PolyMatrix
{
public:
        class PolyMatrixEntry
        {
        public:
                bool isZero;
                Polynomial p;
                int maxDegree,mminDegree;
                vector<Polynomial> forms;
                PolyMatrixEntry(Polynomial const &p_, IntegerVector const &w):
                        p(p_),
                        isZero(p_.isZero())
                        {
                        if(p.isZero())
                        {
                                maxDegree=td_minusInfinity;
                                mminDegree=td_minusInfinity;
                                return;
                        }
                        maxDegree=p_.degree(w);
                        mminDegree=p_.degree(-w);


        //              debug<<maxDegree<<minDegree<<"\n";
                        for(int i=0;i<=maxDegree+mminDegree;i++)forms.push_back(Polynomial(p.getRing()));
                        for(TermMap::const_iterator i=p.terms.begin();i!=p.terms.end();i++)
                                {
                                        forms[dot(i->first.exponent,w)+mminDegree]+=Term(i->second,i->first);
                                }
                }
        };

        list<int>::iterator indexOfSparsestRow(list<int> &rows, list<int> const &columns, int &chosenRowIteratorIndex)
        {
                list<int>::iterator ret=rows.end();
                int bestNumberOfZeros=-1;
                int I=0;
                for(list<int>::iterator i=rows.begin();i!=rows.end();i++,I++)
                {
                        int numberOfZeros=0;
                        for(list<int>::const_iterator j=columns.begin();j!=columns.end();j++)numberOfZeros+=data[*i][*j].isZero;
                        if(numberOfZeros>bestNumberOfZeros)
                        {
                                bestNumberOfZeros=numberOfZeros;
                                ret=i;
                                chosenRowIteratorIndex=I;
                        }
                }
//              cerr<<":"<<bestNumberOfZeros<<endl;
                return ret;
        }
        vector<vector<PolyMatrixEntry> > data;
        PolynomialRing theRing;
        //constructor for Jacobi matrix
        PolyMatrix(PolynomialSet const &generators, IntegerVector const &w, bool takeDerivatives, int numberOfDVariables=-1):
                theRing(generators.getRing())
        {
          if(takeDerivatives)
            {
              int n=generators.size();
              if(numberOfDVariables==-1)numberOfDVariables=n;
              PolynomialSet::const_iterator I=generators.begin();
              for(int i=0;i<n;i++)
                {
                  vector<PolyMatrixEntry> row;
                  for(int j=0;j<numberOfDVariables;j++)
                    row.push_back(PolyMatrixEntry(I->derivative(j),w));
                  data.push_back(row);
                  I++;
                }
            }
          else
            {
              int n=generators.size();
                for(int i=0;i<n;i++)if(i*i>=n){n=i;break;}assert(n*n==generators.size());
                PolynomialSet::const_iterator I=generators.begin();
                for(int i=0;i<n;i++)
                  {
                        vector<PolyMatrixEntry> row;
                        for(int j=0;j<n;j++)
                        {
                                row.push_back(PolyMatrixEntry(*I,w));
                                I++;
                        }
                        data.push_back(row);
                  }
            }
        }
        void print()
        {
                int n=data.size();
                for(int i=0;i<n;i++)
                {
                        for(int j=0;j<data[i].size();j++)
                        {
                                debug<<data[i][j].p<<",";
                        }
                        debug<<"\n";
                }
        }
        void p(list<int> l)
        {
                cerr<<"{";
                for(list<int>::const_iterator i=l.begin();i!=l.end();i++)
                        cerr<<*i<<",";
                cerr<<"}\n";
        }
        IntegerMatrix subTropicalMatrix(bool max, list<int> const &rows, list<int> const &columns)
        {
                IntegerMatrix ret(rows.size(),columns.size());
                list<int>::const_iterator I=rows.begin();
                for(int i=0;i<ret.getHeight();i++,I++)
                {
                        list<int>::const_iterator J=columns.begin();
                        for(int j=0;j<ret.getWidth();j++,J++)
                                ret[i][j]=(max)?data[*I][*J].maxDegree:data[*I][*J].mminDegree;
                }

                return ret;
        }

        Polynomial determinantForm(list<int> rows, list<int> columns, int degree, int level)
        {
                Polynomial ret(theRing);

                IntegerMatrix matMax=subTropicalMatrix(true,rows,columns);
                IntegerMatrix matMMin=subTropicalMatrix(false,rows,columns);

/*                if(level==0)
                {
                        debug<<matMax.getRows();
                        debug<<matMMin.getRows();

                        int maxDet=tropicalDeterminant(matMax);
                        int mminDet=tropicalDeterminant(matMMin);

                        debug<<"Max:"<<maxDet<<" Min:"<<-mminDet<<"\n";
                }
*/
//              debug<<matMax.getRows();
//              debug<<matMMin.getRows();

                int maxDet=tropicalDeterminant(matMax);
                int mminDet=tropicalDeterminant(matMMin);

//              assert(degree==0);

//              maxDet=0;//!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
//              mminDet=0;//!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!

//              debug<<maxDet<<" "<<mminDet<<"\n";
                if(degree>maxDet)return Polynomial(theRing);
                if(-degree>mminDet)return Polynomial(theRing);
                if(rows.size()==1)
                  {
                    if(data[rows.front()][columns.front()].isZero)return Polynomial(theRing);
                   // cerr<<degree<<data[rows.front()][columns.front()].mminDegree<<endl;
                    return data[rows.front()][columns.front()].forms[degree+data[rows.front()][columns.front()].mminDegree];
                  }
                int chosenRowIteratorIndex=0;
                list<int>::iterator chosenRowIterator=indexOfSparsestRow(rows, columns, chosenRowIteratorIndex);//rows.begin();
                int chosenrow=*chosenRowIterator;
                {
                        list<int>::iterator temp=chosenRowIterator;temp++;
                        rows.erase(chosenRowIterator);
                        //no need to update rows afterwards since it is stored on the stack
                }
/*                if(level==0)cerr<<"-"<<chosenrow<<endl;
                if(level==1)cerr<<"++"<<chosenrow<<endl;
                if(level==2)cerr<<"***"<<chosenrow<<endl;
                if(level==3)cerr<<"%%%%%%%%"<<chosenrow<<endl;
  */              int sign=1;
                sign*=(1-2*(chosenRowIteratorIndex&1));
                for(list<int>::iterator i=columns.begin();i!=columns.end();i++)
                {
                        int chosencol=*i;
                        if(!data[chosenrow][chosencol].isZero)
                        {
                                list<int>::iterator temp=i;temp++;
                                columns.erase(i);
                                i=temp;
//                              int D=degree+1;
//                              if(data[chosenrow][chosencol].forms.size()<D)D=data[chosenrow][chosencol].forms.size();
//                              for(int k=0;k<D;k++)
                                for(int k=0;k<=data[chosenrow][chosencol].maxDegree+data[chosenrow][chosencol].mminDegree;k++)
                                {
                                  //cerr<<chosenrow<<chosencol<<endl;
                                  //cerr<<degree<<-k<<data[chosenrow][chosencol].mminDegree<<endl;
                                  assert(k<data[chosenrow][chosencol].forms.size());
                                        if(!data[chosenrow][chosencol].forms[k].isZero())
                                        ret+=data[chosenrow][chosencol].forms[k]*determinantForm(rows,columns,degree-k+data[chosenrow][chosencol].mminDegree,level+1)*theRing.getField().zHomomorphism(sign);
                                }
                                columns.insert(i,chosencol);
                                i--;
                        }
                        sign*=-1;
                }
                rows.push_front(chosenrow);
                return ret;
        }
        Polynomial initialFormOfDeterminant(bool onlyComputeInitial=true)
        {
          list<int> rows=interval(data.size(),0);
          list<int> columns=interval(data.size(),0);

          IntegerMatrix matMax=subTropicalMatrix(true,rows,columns);
          IntegerMatrix matMMin=subTropicalMatrix(false,rows,columns);

          int maxDet=tropicalDeterminant(matMax);
          int mminDet=tropicalDeterminant(matMMin);

          cerr<<"Max"<<maxDet<<"Min"<<-mminDet<<endl;

          Polynomial ret(theRing);
          for(int d=maxDet;d>=-mminDet;d--)
            {
              log1 debug<<"Computing degree "<<d<<"\n";
              ret+=determinantForm(rows,columns,d,0);
              if(onlyComputeInitial&&!ret.isZero())break;
            }
          return ret;
        }
        Polynomial determinant()
        {
          return initialFormOfDeterminant(false);
        }
};


Polynomial initialFormOfDeterminant(PolynomialSet const &g, IntegerVector const &w, bool takeDerivatives)
{
  PolyMatrix m(g,w,takeDerivatives);

  return m.initialFormOfDeterminant();
}

list<int> toIndexed(list<int> const &l)
{
  list<int> ret;
  int a=0;
  for(list<int>::const_iterator i=l.begin();i!=l.end();i++,a++)if(*i)ret.push_back(a);
  return ret;
}

PolynomialSet jacobiMinors(PolynomialSet const &g, int codim)
{
  IntegerVector w(g.getRing().getNumberOfVariables());
  PolyMatrix m(g,w,true,w.size());

  //log1 m.print();
  PolynomialSet ret(g.getRing());

  if(codim<=g.size())if(codim<=w.size())
    {
  list<int> rows;
  for(int i=0;i<g.size()-codim;i++)rows.push_back(0);
  for(int i=0;i<codim;i++)rows.push_back(1);
  do
  {
    list<int> cols;
    for(int i=0;i<w.size()-codim;i++)cols.push_back(0);
    for(int i=0;i<codim;i++)cols.push_back(1);
    do
      {
 //       cerr<<rows.size()<<cols.size()<<endl;
        ret.push_back(m.determinantForm(toIndexed(rows),toIndexed(cols),0,0));
      }
    while(next_permutation(cols.begin(),cols.end()));
  }
  while(next_permutation(rows.begin(),rows.end()));
    }
  return ret;
}