~ubuntu-branches/ubuntu/saucy/libbio-chado-schema-perl/saucy

package Bio::Chado::Schema::Result::General::Dbxref;

BEGIN {

  $Bio::Chado::Schema::Result::General::Dbxref::AUTHORITY = 'cpan:RBUELS';

}

{

  $Bio::Chado::Schema::Result::General::Dbxref::VERSION = '0.20000';

}

# Created by DBIx::Class::Schema::Loader

# DO NOT MODIFY THE FIRST PART OF THIS FILE

use strict;

use warnings;

use base 'DBIx::Class::Core';

=head1 NAME

Bio::Chado::Schema::Result::General::Dbxref

=head1 DESCRIPTION

A unique, global, public, stable identifier. Not necessarily an external reference - can reference data items inside the particular chado instance being used. Typically a row in a table can be uniquely identified with a primary identifier (called dbxref_id); a table may also have secondary identifiers (in a linking table <T>_dbxref). A dbxref is generally written as <DB>:<ACCESSION> or as <DB>:<ACCESSION>:<VERSION>.

=cut

__PACKAGE__->table("dbxref");

=head1 ACCESSORS

=head2 dbxref_id

  data_type: 'integer'

  is_auto_increment: 1

  is_nullable: 0

  sequence: 'dbxref_dbxref_id_seq'

=head2 db_id

  data_type: 'integer'

  is_foreign_key: 1

  is_nullable: 0

=head2 accession

  data_type: 'varchar'

  is_nullable: 0

  size: 255

The local part of the identifier. Guaranteed by the db authority to be unique for that db.

=head2 version

  data_type: 'varchar'

  default_value: (empty string)

  is_nullable: 0

  size: 255

=head2 description

  data_type: 'text'

  is_nullable: 1

=cut

__PACKAGE__->add_columns(

  "dbxref_id",

  {

    data_type         => "integer",

    is_auto_increment => 1,

    is_nullable       => 0,

    sequence          => "dbxref_dbxref_id_seq",

  },

  "db_id",

  { data_type => "integer", is_foreign_key => 1, is_nullable => 0 },

  "accession",

  { data_type => "varchar", is_nullable => 0, size => 255 },

  "version",

  { data_type => "varchar", default_value => "", is_nullable => 0, size => 255 },

  "description",

  { data_type => "text", is_nullable => 1 },

);

__PACKAGE__->set_primary_key("dbxref_id");

__PACKAGE__->add_unique_constraint("dbxref_c1", ["db_id", "accession", "version"]);

=head1 RELATIONS

=head2 arraydesigns

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Mage::Arraydesign>

=cut

__PACKAGE__->has_many(

  "arraydesigns",

  "Bio::Chado::Schema::Result::Mage::Arraydesign",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 assays

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Mage::Assay>

=cut

__PACKAGE__->has_many(

  "assays",

  "Bio::Chado::Schema::Result::Mage::Assay",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 biomaterials

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Mage::Biomaterial>

=cut

__PACKAGE__->has_many(

  "biomaterials",

  "Bio::Chado::Schema::Result::Mage::Biomaterial",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 biomaterial_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Mage::BiomaterialDbxref>

=cut

__PACKAGE__->has_many(

  "biomaterial_dbxrefs",

  "Bio::Chado::Schema::Result::Mage::BiomaterialDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 cell_line_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::CellLine::CellLineDbxref>

=cut

__PACKAGE__->has_many(

  "cell_line_dbxrefs",

  "Bio::Chado::Schema::Result::CellLine::CellLineDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 cvterm

Type: might_have

Related object: L<Bio::Chado::Schema::Result::Cv::Cvterm>

=cut

__PACKAGE__->might_have(

  "cvterm",

  "Bio::Chado::Schema::Result::Cv::Cvterm",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 cvterm_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Cv::CvtermDbxref>

=cut

__PACKAGE__->has_many(

  "cvterm_dbxrefs",

  "Bio::Chado::Schema::Result::Cv::CvtermDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 db

Type: belongs_to

Related object: L<Bio::Chado::Schema::Result::General::Db>

=cut

__PACKAGE__->belongs_to(

  "db",

  "Bio::Chado::Schema::Result::General::Db",

  { db_id => "db_id" },

  {

    cascade_copy   => 0,

    cascade_delete => 0,

    is_deferrable  => 1,

    on_delete      => "CASCADE",

    on_update      => "CASCADE",

  },

);

=head2 dbxrefprops

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Cv::Dbxrefprop>

=cut

__PACKAGE__->has_many(

  "dbxrefprops",

  "Bio::Chado::Schema::Result::Cv::Dbxrefprop",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 elements

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Mage::Element>

=cut

__PACKAGE__->has_many(

  "elements",

  "Bio::Chado::Schema::Result::Mage::Element",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 features

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Sequence::Feature>

=cut

__PACKAGE__->has_many(

  "features",

  "Bio::Chado::Schema::Result::Sequence::Feature",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 feature_cvterm_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Sequence::FeatureCvtermDbxref>

=cut

__PACKAGE__->has_many(

  "feature_cvterm_dbxrefs",

  "Bio::Chado::Schema::Result::Sequence::FeatureCvtermDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 feature_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Sequence::FeatureDbxref>

=cut

__PACKAGE__->has_many(

  "feature_dbxrefs",

  "Bio::Chado::Schema::Result::Sequence::FeatureDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 library_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Library::LibraryDbxref>

=cut

__PACKAGE__->has_many(

  "library_dbxrefs",

  "Bio::Chado::Schema::Result::Library::LibraryDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 nd_experiment_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentDbxref>

=cut

__PACKAGE__->has_many(

  "nd_experiment_dbxrefs",

  "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 nd_experiment_stock_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentStockDbxref>

=cut

__PACKAGE__->has_many(

  "nd_experiment_stock_dbxrefs",

  "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentStockDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 organism_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Organism::OrganismDbxref>

=cut

__PACKAGE__->has_many(

  "organism_dbxrefs",

  "Bio::Chado::Schema::Result::Organism::OrganismDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 phylonode_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Phylogeny::PhylonodeDbxref>

=cut

__PACKAGE__->has_many(

  "phylonode_dbxrefs",

  "Bio::Chado::Schema::Result::Phylogeny::PhylonodeDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 phylotrees

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Phylogeny::Phylotree>

=cut

__PACKAGE__->has_many(

  "phylotrees",

  "Bio::Chado::Schema::Result::Phylogeny::Phylotree",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 protocols

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Mage::Protocol>

=cut

__PACKAGE__->has_many(

  "protocols",

  "Bio::Chado::Schema::Result::Mage::Protocol",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 pub_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Pub::PubDbxref>

=cut

__PACKAGE__->has_many(

  "pub_dbxrefs",

  "Bio::Chado::Schema::Result::Pub::PubDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 stocks

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Stock::Stock>

=cut

__PACKAGE__->has_many(

  "stocks",

  "Bio::Chado::Schema::Result::Stock::Stock",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 stock_dbxrefs

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Stock::StockDbxref>

=cut

__PACKAGE__->has_many(

  "stock_dbxrefs",

  "Bio::Chado::Schema::Result::Stock::StockDbxref",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

=head2 studies

Type: has_many

Related object: L<Bio::Chado::Schema::Result::Mage::Study>

=cut

__PACKAGE__->has_many(

  "studies",

  "Bio::Chado::Schema::Result::Mage::Study",

  { "foreign.dbxref_id" => "self.dbxref_id" },

  { cascade_copy => 0, cascade_delete => 0 },

);

# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:58

# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:DH06/5V4IKTYucfk2dsWHA

=head1 MANY-TO-MANY RELATIONSHIPS

=head2 biomaterials_mm

Relation to L<Bio::Chado::Schema::Result::Mage::Biomaterial> (i.e. C<biomaterial> table)

via the C<organism_dbxrefs> table.

=cut

__PACKAGE__->many_to_many

    (

     'biomaterials_mm',

     'biomaterial_dbxrefs' => 'biomaterial',

    );

=head2 cell_lines_mm

Relation to L<Bio::Chado::Schema::Result::CellLine::CellLine> (i.e. C<cell_line> table)

via the C<cell_line_dbxrefs> table.

=cut

__PACKAGE__->many_to_many

    (

     'cell_lines_mm',

     'cell_line_dbxrefs' => 'cell_line',

    );

=head2 cvterms_mm

Relation to L<Bio::Chado::Schema::Result::Cv::Cvterm> (i.e. C<cvterm> table)

via the C<cvterm_dbxrefs> table.

=cut

__PACKAGE__->many_to_many

    (

     'cvterms_mm',

     'cvterm_dbxrefs' => 'cvterm',

    );

=head2 features_mm

Relation to L<Bio::Chado::Schema::Result::Sequence::Feature> (i.e. C<feature> table)

via the C<feature_dbxrefs> table.

=cut

__PACKAGE__->many_to_many

    (

     'features_mm',

     'feature_dbxrefs' => 'feature',

    );

=head2 libraries_mm

Relation to L<Bio::Chado::Schema::Result::Library::LibraryDbxref> (i.e. C<library> table)

via the C<library_dbxrefs> table.

=cut

__PACKAGE__->many_to_many

    (

     'libraries_mm',

     'library_dbxrefs' => 'library',

    );

=head2 organisms_mm

Relation to L<Bio::Chado::Schema::Result::Organism::Organism> (i.e. C<organism> table)

via the C<organism_dbxrefs> table.

=cut

__PACKAGE__->many_to_many

    (

     'organisms_mm',

     'organism_dbxrefs' => 'organism',

    );

=head2 phylonodes_mm

Relation to L<Bio::Chado::Schema::Result::Phylogeny::Phylonode> (i.e. C<phylonode> table)

via the C<phylonode_dbxrefs> table.

=cut

__PACKAGE__->many_to_many

    (

     'phylonodes_mm',

     'phylonode_dbxrefs' => 'phylonode',

    );

=head2 pubs_mm

Relation to L<Bio::Chado::Schema::Result::Pub::Pub> (i.e. C<pub> table)

via the C<pub_dbxrefs> table.

=cut

__PACKAGE__->many_to_many

    (

     'pubs_mm',

     'pub_dbxrefs' => 'pub',

    );

=head2 stocks_mm

Relation to L<Bio::Chado::Schema::Result::Stock::Stock> (i.e. C<stock> table)

via the C<stock_dbxrefs> table.

=cut

__PACKAGE__->many_to_many

    (

     'stocks_mm',

     'stock_dbxrefs' => 'stock',

    );

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