#ifndef _objinsdseq_ #define _objinsdseq_ #undef NLM_EXTERN #ifdef NLM_IMPORT #define NLM_EXTERN NLM_IMPORT #else #define NLM_EXTERN extern #endif #ifdef __cplusplus extern "C" { /* } */ #endif /************************************************** * * Generated objects for Module INSD-INSDSeq * Generated using ASNCODE Revision: 6.17 at May 26, 2010 12:38 PM * **************************************************/ NLM_EXTERN Boolean LIBCALL objinsdseqAsnLoad PROTO((void)); /************************************************** * * INSDSet * **************************************************/ typedef struct struct_INSDSeq INSDSet; typedef struct struct_INSDSeq PNTR INSDSetPtr; #define INSDSetNew() INSDSeqNew() #ifdef NLM_GENERATED_CODE_PROTO NLM_EXTERN INSDSetPtr LIBCALL INSDSetFree PROTO ((INSDSetPtr )); NLM_EXTERN INSDSetPtr LIBCALL INSDSetNew PROTO (( void )); NLM_EXTERN INSDSetPtr LIBCALL INSDSetAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDSetAsnWrite PROTO (( INSDSetPtr , AsnIoPtr, AsnTypePtr)); #endif /* NLM_GENERATED_CODE_PROTO */ /************************************************** * * INSDSeq * **************************************************/ typedef struct struct_INSDSeq { struct struct_INSDSeq PNTR next; Uint4 OBbits__; CharPtr locus; Int4 length; CharPtr strandedness; CharPtr moltype; CharPtr topology; CharPtr division; CharPtr update_date; CharPtr create_date; CharPtr update_release; CharPtr create_release; CharPtr definition; CharPtr primary_accession; CharPtr entry_version; CharPtr accession_version; ValNodePtr other_seqids; ValNodePtr secondary_accessions; CharPtr project; ValNodePtr keywords; CharPtr segment; CharPtr source; CharPtr organism; CharPtr taxonomy; struct struct_INSDReference PNTR references; CharPtr comment; struct struct_INSDComment PNTR comment_set; struct struct_INSDStrucComment PNTR struc_comments; CharPtr primary; CharPtr source_db; CharPtr database_reference; struct struct_INSDFeature PNTR feature_table; struct struct_INSDFeatureSet PNTR feature_set; CharPtr sequence; CharPtr contig; struct struct_INSDAltSeqData PNTR alt_seq; } INSDSeq, PNTR INSDSeqPtr; NLM_EXTERN INSDSeqPtr LIBCALL INSDSeqFree PROTO ((INSDSeqPtr )); NLM_EXTERN INSDSeqPtr LIBCALL INSDSeqNew PROTO (( void )); NLM_EXTERN INSDSeqPtr LIBCALL INSDSeqAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDSeqAsnWrite PROTO (( INSDSeqPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDReference * **************************************************/ typedef struct struct_INSDReference { struct struct_INSDReference PNTR next; Uint4 OBbits__; CharPtr reference; CharPtr position; ValNodePtr authors; CharPtr consortium; CharPtr title; CharPtr journal; struct struct_INSDXref PNTR xref; #define OB__INSDReference_pubmed 0 Int4 pubmed; CharPtr remark; } INSDReference, PNTR INSDReferencePtr; NLM_EXTERN INSDReferencePtr LIBCALL INSDReferenceFree PROTO ((INSDReferencePtr )); NLM_EXTERN INSDReferencePtr LIBCALL INSDReferenceNew PROTO (( void )); NLM_EXTERN INSDReferencePtr LIBCALL INSDReferenceAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDReferenceAsnWrite PROTO (( INSDReferencePtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDComment * **************************************************/ typedef struct struct_INSDComment { struct struct_INSDComment PNTR next; Uint4 OBbits__; CharPtr type; struct struct_INSDCommentParagraph PNTR paragraphs; } INSDComment, PNTR INSDCommentPtr; NLM_EXTERN INSDCommentPtr LIBCALL INSDCommentFree PROTO ((INSDCommentPtr )); NLM_EXTERN INSDCommentPtr LIBCALL INSDCommentNew PROTO (( void )); NLM_EXTERN INSDCommentPtr LIBCALL INSDCommentAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDCommentAsnWrite PROTO (( INSDCommentPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDStrucComment * **************************************************/ typedef struct struct_INSDStrucComment { struct struct_INSDStrucComment PNTR next; Uint4 OBbits__; CharPtr name; struct struct_INSDStrucCommentItem PNTR items; } INSDStrucComment, PNTR INSDStrucCommentPtr; NLM_EXTERN INSDStrucCommentPtr LIBCALL INSDStrucCommentFree PROTO ((INSDStrucCommentPtr )); NLM_EXTERN INSDStrucCommentPtr LIBCALL INSDStrucCommentNew PROTO (( void )); NLM_EXTERN INSDStrucCommentPtr LIBCALL INSDStrucCommentAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDStrucCommentAsnWrite PROTO (( INSDStrucCommentPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDFeature * **************************************************/ typedef struct struct_INSDFeature { struct struct_INSDFeature PNTR next; Uint4 OBbits__; CharPtr key; CharPtr location; struct struct_INSDInterval PNTR intervals; CharPtr operator__; #define OB__INSDFeature_partial5 0 Uint1 partial5; #define OB__INSDFeature_partial3 1 Uint1 partial3; struct struct_INSDQualifier PNTR quals; struct struct_INSDXref PNTR xrefs; } INSDFeature, PNTR INSDFeaturePtr; NLM_EXTERN INSDFeaturePtr LIBCALL INSDFeatureFree PROTO ((INSDFeaturePtr )); NLM_EXTERN INSDFeaturePtr LIBCALL INSDFeatureNew PROTO (( void )); NLM_EXTERN INSDFeaturePtr LIBCALL INSDFeatureAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDFeatureAsnWrite PROTO (( INSDFeaturePtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDFeatureSet * **************************************************/ typedef struct struct_INSDFeatureSet { struct struct_INSDFeatureSet PNTR next; Uint4 OBbits__; CharPtr annot_source; struct struct_INSDFeature PNTR features; } INSDFeatureSet, PNTR INSDFeatureSetPtr; NLM_EXTERN INSDFeatureSetPtr LIBCALL INSDFeatureSetFree PROTO ((INSDFeatureSetPtr )); NLM_EXTERN INSDFeatureSetPtr LIBCALL INSDFeatureSetNew PROTO (( void )); NLM_EXTERN INSDFeatureSetPtr LIBCALL INSDFeatureSetAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDFeatureSetAsnWrite PROTO (( INSDFeatureSetPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDAltSeqData * **************************************************/ typedef struct struct_INSDAltSeqData { struct struct_INSDAltSeqData PNTR next; Uint4 OBbits__; CharPtr name; struct struct_INSDAltSeqItem PNTR items; } INSDAltSeqData, PNTR INSDAltSeqDataPtr; NLM_EXTERN INSDAltSeqDataPtr LIBCALL INSDAltSeqDataFree PROTO ((INSDAltSeqDataPtr )); NLM_EXTERN INSDAltSeqDataPtr LIBCALL INSDAltSeqDataNew PROTO (( void )); NLM_EXTERN INSDAltSeqDataPtr LIBCALL INSDAltSeqDataAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDAltSeqDataAsnWrite PROTO (( INSDAltSeqDataPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDXref * **************************************************/ typedef struct struct_INSDXref { struct struct_INSDXref PNTR next; Uint4 OBbits__; CharPtr dbname; CharPtr id; } INSDXref, PNTR INSDXrefPtr; NLM_EXTERN INSDXrefPtr LIBCALL INSDXrefFree PROTO ((INSDXrefPtr )); NLM_EXTERN INSDXrefPtr LIBCALL INSDXrefNew PROTO (( void )); NLM_EXTERN INSDXrefPtr LIBCALL INSDXrefAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDXrefAsnWrite PROTO (( INSDXrefPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDCommentParagraph * **************************************************/ typedef struct struct_INSDCommentParagraph { struct struct_INSDCommentParagraph PNTR next; Uint4 OBbits__; struct struct_INSDCommentItem PNTR items; } INSDCommentParagraph, PNTR INSDCommentParagraphPtr; NLM_EXTERN INSDCommentParagraphPtr LIBCALL INSDCommentParagraphFree PROTO ((INSDCommentParagraphPtr )); NLM_EXTERN INSDCommentParagraphPtr LIBCALL INSDCommentParagraphNew PROTO (( void )); NLM_EXTERN INSDCommentParagraphPtr LIBCALL INSDCommentParagraphAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDCommentParagraphAsnWrite PROTO (( INSDCommentParagraphPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDCommentItem * **************************************************/ typedef struct struct_INSDCommentItem { struct struct_INSDCommentItem PNTR next; Uint4 OBbits__; CharPtr value; CharPtr url; } INSDCommentItem, PNTR INSDCommentItemPtr; NLM_EXTERN INSDCommentItemPtr LIBCALL INSDCommentItemFree PROTO ((INSDCommentItemPtr )); NLM_EXTERN INSDCommentItemPtr LIBCALL INSDCommentItemNew PROTO (( void )); NLM_EXTERN INSDCommentItemPtr LIBCALL INSDCommentItemAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDCommentItemAsnWrite PROTO (( INSDCommentItemPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDStrucCommentItem * **************************************************/ typedef struct struct_INSDStrucCommentItem { struct struct_INSDStrucCommentItem PNTR next; Uint4 OBbits__; CharPtr tag; CharPtr value; CharPtr url; } INSDStrucCommentItem, PNTR INSDStrucCommentItemPtr; NLM_EXTERN INSDStrucCommentItemPtr LIBCALL INSDStrucCommentItemFree PROTO ((INSDStrucCommentItemPtr )); NLM_EXTERN INSDStrucCommentItemPtr LIBCALL INSDStrucCommentItemNew PROTO (( void )); NLM_EXTERN INSDStrucCommentItemPtr LIBCALL INSDStrucCommentItemAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDStrucCommentItemAsnWrite PROTO (( INSDStrucCommentItemPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDInterval * **************************************************/ typedef struct struct_INSDInterval { struct struct_INSDInterval PNTR next; Uint4 OBbits__; #define OB__INSDInterval_from 0 Int4 from; #define OB__INSDInterval_to 1 Int4 to; #define OB__INSDInterval_point 2 Int4 point; #define OB__INSDInterval_iscomp 3 Uint1 iscomp; #define OB__INSDInterval_interbp 4 Uint1 interbp; CharPtr accession; } INSDInterval, PNTR INSDIntervalPtr; NLM_EXTERN INSDIntervalPtr LIBCALL INSDIntervalFree PROTO ((INSDIntervalPtr )); NLM_EXTERN INSDIntervalPtr LIBCALL INSDIntervalNew PROTO (( void )); NLM_EXTERN INSDIntervalPtr LIBCALL INSDIntervalAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDIntervalAsnWrite PROTO (( INSDIntervalPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDQualifier * **************************************************/ typedef struct struct_INSDQualifier { struct struct_INSDQualifier PNTR next; Uint4 OBbits__; CharPtr name; CharPtr value; } INSDQualifier, PNTR INSDQualifierPtr; NLM_EXTERN INSDQualifierPtr LIBCALL INSDQualifierFree PROTO ((INSDQualifierPtr )); NLM_EXTERN INSDQualifierPtr LIBCALL INSDQualifierNew PROTO (( void )); NLM_EXTERN INSDQualifierPtr LIBCALL INSDQualifierAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDQualifierAsnWrite PROTO (( INSDQualifierPtr , AsnIoPtr, AsnTypePtr)); /************************************************** * * INSDAltSeqItem * **************************************************/ typedef struct struct_INSDAltSeqItem { struct struct_INSDAltSeqItem PNTR next; Uint4 OBbits__; struct struct_INSDInterval PNTR interval; #define OB__INSDAltSeqItem_isgap 0 Uint1 isgap; #define OB__INSDAltSeqItem_gap_length 1 Int4 gap_length; CharPtr gap_type; CharPtr gap_linkage; CharPtr gap_comment; CharPtr first_accn; CharPtr last_accn; CharPtr value; } INSDAltSeqItem, PNTR INSDAltSeqItemPtr; NLM_EXTERN INSDAltSeqItemPtr LIBCALL INSDAltSeqItemFree PROTO ((INSDAltSeqItemPtr )); NLM_EXTERN INSDAltSeqItemPtr LIBCALL INSDAltSeqItemNew PROTO (( void )); NLM_EXTERN INSDAltSeqItemPtr LIBCALL INSDAltSeqItemAsnRead PROTO (( AsnIoPtr, AsnTypePtr)); NLM_EXTERN Boolean LIBCALL INSDAltSeqItemAsnWrite PROTO (( INSDAltSeqItemPtr , AsnIoPtr, AsnTypePtr)); #ifdef __cplusplus /* { */ } #endif #endif /* _objinsdseq_ */ #undef NLM_EXTERN #ifdef NLM_EXPORT #define NLM_EXTERN NLM_EXPORT #else #define NLM_EXTERN #endif