- Committer: Xavier de Pedro
- Date: 2013-05-06 15:08:46 UTC
- Revision ID: xavier.depedro@vhir.org-20130506150846-pguwcsaecsq9pray
Changed the function to run Count reads (from snpEff) so that stderr is sent to another log file, to prevent oversizing the standard log file (near 1 Gb of data instead of just a few hundred Kb).
| Filename | Latest Rev | Last Changed | Committer | Comment | Size | ||
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dir_in
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1 | 12 years ago | Xavi | First version, not necessarily working. Work in pr |
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dir_out
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1 | 12 years ago | Xavi | First version, not necessarily working. Work in pr |
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docs
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3 | 12 years ago | Xavi | nous arxius d'exemple afegits |
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reports
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22.1.2 | 11 years ago | Xavi | Merging in camagroc changes done in MainHead |
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runs
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23 | 11 years ago | Xavier de Pedro | added files frmo the initial work towards parallel |
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test_in1
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88 | 11 years ago | Xavier de Pedro | Refactoring of test files, and removing html doc f |
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test_in2
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52 | 11 years ago | UEB Staff | Deleted a few files (house cleaning... left as tem |
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test_out1
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88 | 11 years ago | Xavier de Pedro | Refactoring of test files, and removing html doc f |
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test_out2
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52 | 11 years ago | UEB Staff | Deleted a few files (house cleaning... left as tem |
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.bzrignore |
81 | 11 years ago | Xavier de Pedro | Changing some default values, and fixing minor bug | 4.8 KB |
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eva_analysis_functions.R |
119 | 11 years ago | Xavier de Pedro | Changed the function to run Count reads (from snpE | 207 KB |
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eva_analysis_wrappers.R |
118 | 11 years ago | Xavier de Pedro | Since filtering by quality was still failing for q | 22.9 KB |
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eva_buildmenu.R |
108 | 11 years ago | Xavier de Pedro | New functions added and a few minor improvements: | 14.1 KB |
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eva_main.R |
118 | 11 years ago | Xavier de Pedro | Since filtering by quality was still failing for q | 32 KB |
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eva_params.R |
118 | 11 years ago | Xavier de Pedro | Since filtering by quality was still failing for q | 63.8 KB |
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snpEff.config
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83 | 11 years ago | Xavier de Pedro | Some bug fix and minor improvements: * Added test | . |
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