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Committer: Christopher Hunt
Date: 2015-12-14 08:48:38 UTC
mfrom: (697.47.179 cctag_corr)
Revision ID: christopher.hunt08@imperial.ac.uk-20151214084838-wjl32e152yx3ks1j

MAUS Merg Remerged

files added:
bin/user/scifi/event_viewer.py

bin/user/scifi/tracker_resolution_plots.py

files/calibration/emrcalib_cosmics_july2015.txt

src/common_cpp/Utils/EMRGeometryMap.cc

src/common_cpp/Utils/EMRGeometryMap.hh

src/common_cpp/Utils/ReduceCppTools.cc

src/common_cpp/Utils/ReduceCppTools.hh

src/common_py/MausReducedData.py

src/common_py/analysis

src/common_py/analysis/__init__.py

src/common_py/analysis/covariances.py

src/common_py/analysis/hit_types.py

src/common_py/analysis/tools.py

src/input/InputPyRoot

src/input/InputPyRoot/InputPyRoot.py

src/legacy/FILES/Models/Configurations/Step_4_def_5_2.dat

src/map/MapCppTrackerMCDigitization/scifi_calibration_MC.txt

src/reduce/ReduceCppEMRPlot

src/reduce/ReduceCppEMRPlot/ReduceCppEMRPlot.cc

src/reduce/ReduceCppEMRPlot/ReduceCppEMRPlot.hh

src/reduce/ReduceCppEMRPlot/sconscript

src/reduce/ReduceCppTOFPlot

src/reduce/ReduceCppTOFPlot/ReduceCppTOFPlot.cc

src/reduce/ReduceCppTOFPlot/ReduceCppTOFPlot.hh

src/reduce/ReduceCppTOFPlot/sconscript

third_party/install/share/test_data

third_party/install/share/test_data/gdc1901.001.md5

third_party/source/libmonitor_1.0.0.tarz.md5

third_party/source/unpacking-mice_4.0.0.tarz.md5

third_party/source/xerces-c-3.1.2.tar.gz.md5

files removed:
third_party/source/cdb-1.0.0.0.tar.gz.md5

third_party/source/cdb-1.1.2.tar.gz.md5

third_party/source/geant4.9.5.p01.tar.gz.md5

third_party/source/jsoncpp-src-0.5.0.tar.gz.md5

third_party/source/libmonitor.tarz.md5

files modified:
README

RELEASENOTES

bin/Global/datacard_200MeV_mu_plus.py

bin/online/reconstruct_daq_emr_reducer.py

bin/online/reconstruct_daq_tof_reducer.py

bin/simulate_mice.py

doc/doc_src/G4BLMAUSInterface.tex

doc/doc_src/detectors/tracker/03-Reference-surfaces-and-coordinate-systems/03-Reference-surfaces-and-coordinate-systems.tex

doc/doc_src/detectors/tracker/04-Reconstruction/04-01-Hits-and-clusters/04-01-Hits-and-clusters.tex

doc/maus_user_guide.pdf

install_build_test.bash

src/common_cpp/API/IReduce.hh

src/common_cpp/API/ReduceBase-inl.hh

src/common_cpp/API/ReduceBase.hh

src/common_cpp/DataStructure/EMRBarHit.cc

src/common_cpp/DataStructure/EMRBarHit.hh

src/common_cpp/DataStructure/EMREvent.cc

src/common_cpp/DataStructure/EMREvent.hh

src/common_cpp/DataStructure/ImageData/CanvasWrapper.cc

src/common_cpp/DataStructure/ImageData/Image.cc

src/common_cpp/DataStructure/SciFiBasePRTrack.cc

src/common_cpp/DataStructure/SciFiBasePRTrack.hh

src/common_cpp/DataStructure/SciFiEvent.cc

src/common_cpp/DataStructure/SciFiHelicalPRTrack.cc

src/common_cpp/DataStructure/SciFiHelicalPRTrack.hh

src/common_cpp/DataStructure/SciFiSpacePoint.cc

src/common_cpp/DataStructure/SciFiSpacePoint.hh

src/common_cpp/DataStructure/SciFiStraightPRTrack.cc

src/common_cpp/DataStructure/SciFiStraightPRTrack.hh

src/common_cpp/DataStructure/SciFiTrack.cc

src/common_cpp/DataStructure/SciFiTrack.hh

src/common_cpp/DetModel/EMR/BarParameterisation.cc

src/common_cpp/DetModel/EMR/EMRBar.cc

src/common_cpp/DetModel/EMR/EMRSD.cc

src/common_cpp/JsonCppProcessors/EMRBarHitProcessor.cc

src/common_cpp/JsonCppProcessors/EMREventProcessor.cc

src/common_cpp/JsonCppProcessors/HitProcessor.hh

src/common_cpp/JsonCppProcessors/SciFiHelicalPRTrackProcessor.cc

src/common_cpp/JsonCppProcessors/SciFiSpacePointProcessor.cc

src/common_cpp/JsonCppProcessors/SciFiStraightPRTrackProcessor.cc

src/common_cpp/Plotting/SciFi/TrackerDataManager.hh

src/common_cpp/Recon/SciFi/PatternRecognition.cc

src/common_cpp/Recon/SciFi/PatternRecognition.hh

src/common_cpp/Recon/SciFi/SciFiClusterRec.cc

src/common_cpp/Simulation/DetectorConstruction.cc

src/common_cpp/Simulation/MAUSGeant4Manager.cc

src/common_cpp/Utils/DAQChannelMap.cc

src/common_cpp/Utils/DAQChannelMap.hh

src/common_cpp/Utils/EMRCalibrationMap.cc

src/common_cpp/Utils/EMRCalibrationMap.hh

src/common_cpp/Utils/KLCalibrationMap.cc

src/common_cpp/Utils/KLCalibrationMap.hh

src/common_cpp/Utils/KLChannelMap.cc *

src/common_cpp/Utils/KLChannelMap.hh *

src/common_cpp/Utils/PyObjectWrapper-inl.hh

src/common_cpp/Utils/TH2EMR.cc *

src/common_cpp/Utils/TH2EMR.hh *

src/common_cpp/Utils/TOFCalibrationMap.cc

src/common_cpp/Utils/TOFCalibrationMap.hh

src/common_cpp/Utils/TOFChannelMap.cc

src/common_cpp/Utils/TOFChannelMap.hh

src/common_cpp/Utils/VersionNumber.hh

src/common_py/ConfigurationDefaults.py

src/common_py/calibration/get_emr_calib.py

src/common_py/calibration/get_tof_cabling.py

src/common_py/framework/single_thread.py

src/common_py/geometry/CADImport.py

src/common_py/geometry/GDMLtoCDB.py

src/common_py/geometry/xsltScripts/ParentFileCreation.xsl

src/common_py/maus_build_tools/core_builder.py

src/common_py/maus_build_tools/environment_tools.py

src/input/InputCppDAQData/InputCppDAQData.cc

src/input/InputCppDAQData/InputCppDAQData.hh

src/input/InputCppDAQData/UnpackEventLib.cc

src/input/InputCppDAQData/UnpackEventLib.hh

src/input/InputCppDAQData/fADCDataProcessor.hh

src/legacy/Config/ModuleTextFileIO.cc

src/legacy/FILES/Models/Configurations/Stage4.dat

src/legacy/FILES/Models/Configurations/Stage6.dat

src/legacy/FILES/Models/Modules/BeamLine/BeamLine.dat

src/legacy/FILES/Models/Modules/EMR/EMR.dat

src/map/MapCppCkovMCDigitizer/mc_test.dat

src/map/MapCppEMRMCDigitization/MapCppEMRMCDigitization.cc

src/map/MapCppEMRMCDigitization/MapCppEMRMCDigitization.hh

src/map/MapCppEMRMCDigitization/processTest.json

src/map/MapCppEMRMCDigitization/test_map_cpp_emr_mc_digitization.py

src/map/MapCppEMRRecon/MapCppEMRRecon.cc

src/map/MapCppEMRRecon/MapCppEMRRecon.hh

src/map/MapCppEMRRecon/processTest.json

src/map/MapCppEMRRecon/test_map_cpp_emr_recon.py

src/map/MapCppGlobalPID/kl_pid_test.json

src/map/MapCppGlobalReconImport/global_import_test.json

src/map/MapCppGlobalReconImport/test_MapCppGlobalReconImport.py

src/map/MapCppKLMCDigitizer/mc_test.dat

src/map/MapCppTOFDigits/MapCppTOFDigits.cc

src/map/MapCppTOFDigits/MapCppTOFDigits.hh

src/map/MapCppTOFMCDigitizer/MapCppTOFMCDigitizer.cc

src/map/MapCppTOFMCDigitizer/mc_test.json

src/map/MapCppTOFSpacePoints/MapCppTOFSpacePoints.hh

src/map/MapCppTrackerMCDigitization/MapCppTrackerMCDigitization.cc

src/map/MapCppTrackerMCDigitization/MapCppTrackerMCDigitization.hh

src/map/MapCppTrackerMCDigitization/maus_output.json

src/map/MapCppTrackerMCDigitization/simulation_sample

src/map/MapCppTrackerMCNoise/MapCppTrackerMCNoise.cc

src/map/MapCppTrackerMCNoise/MapCppTrackerMCNoise.hh

src/map/MapCppTrackerMCNoise/maus_output.json

src/map/MapCppTrackerRecon/MapCppTrackerRecon.cc

src/map/MapCppTrackerRecon/MapCppTrackerRecon.hh

src/map/MapCppTrackerRecon/test_helical_digits.json

src/map/MapCppTrackerRecon/test_straight_digits.json

src/map/MapPyBeamMaker/MapPyBeamMaker.py

src/map/MapPyBeamMaker/beam.py

src/map/MapPyBeamlineSimulation/MapPyBeamlineSimulation.py

src/output/OutputPyRootImage/OutputPyRootImage.py

src/output/OutputPyRootImage/test_output_py_root_image.py

src/reduce/ReducePyEMRPlot/ReducePyEMRPlot.py

src/reduce/ReducePyTOFPlot/ReducePyTOFPlot.py

tests/build_release.py

tests/cpp_unit/API/ReduceBaseTest.cc

tests/cpp_unit/DataStructure/SciFiHelicalPRTrackTest.cc

tests/cpp_unit/DataStructure/SciFiStraightPRTrackTest.cc

tests/cpp_unit/JsonCppProcessors/ReconEventProcessorTest.cc

tests/cpp_unit/JsonCppProcessors/SpillProcessorTest.cc

tests/cpp_unit/Maths/ComplexTest.cc

tests/cpp_unit/Plotting/SciFi/TrackerDataManagerTest.cc

tests/cpp_unit/Recon/Bayes/JointPDFTest.cc

tests/cpp_unit/Recon/SciFi/PatternRecognitionTest.cc

tests/integration/test_load/test_load.py

tests/integration/test_scifi/test_scifi_recon_helical/test_scifi_recon_helical.py

tests/py_unit/test_calibration/test_get_tof_cabling.py

third_party/bash/00get_all_libs.bash

third_party/bash/01python.bash

third_party/bash/02swig.bash

third_party/bash/10setuptools.bash

third_party/bash/11gtest.bash

third_party/bash/20gsl.bash

third_party/bash/21root.bash

third_party/bash/28xercesc.bash

third_party/bash/29expat.bash

third_party/bash/32clhep2.1.1.0.bash

third_party/bash/35geant4.9.6.bash

third_party/bash/39numpy.bash

third_party/bash/40python_extras.bash

third_party/bash/41cpplint.bash

third_party/bash/42libxml2.bash

third_party/bash/43libxslt.bash

third_party/bash/44cdb.bash

third_party/bash/45beamline_fieldmaps.bash

third_party/bash/50cloc.bash

third_party/bash/51xboa.bash

third_party/bash/52jsoncpp.bash

third_party/bash/53unpacking.bash

third_party/bash/54flex.bash

third_party/bash/55doxygen.bash

third_party/bash/60recpack.bash

third_party/bash/61monitoring.bash

third_party/bash/70daq.bash

third_party/bash/71test_data.bash

third_party/bash/72maus-apps.bash

third_party/bash/81G4beamline.bash

third_party/bash/90gmp.bash

third_party/bash/91mpfr.bash

third_party/bash/92mpc.bash

third_party/bash/93gcc.bash

third_party/build_all.bash

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third_party/bash/93gcc.bash

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filename=${directory}.tar.gz

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url=ftp://ftp.mirrorservice.org/sites/sourceware.org/pub/gcc/releases/gcc-4.9.3/${filename}

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echo

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echo 'INFO: Installing third party library GCC 4.9.3'

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echo '----------------------------------------------'

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echo

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while [[ $# > 1 ]]

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do

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key="$1"

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