~jon-hill/supertree-toolkit/fix

~jon-hill/supertree-toolkit/fix_comments » Changes from revision 124

From Revision 124 to 105

Rev	Summary	Authors	Date
124	Allowing . in attributes Allowing . in attributes	Jon Hill	10 years ago
123	Allowing multiple optimality_criteria Allowing multiple optimality_criteria	Jon Hill	10 years ago
122	Working version info Working version info	Jon Hill	10 years ago
121	Adding version number to gui and cli Adding version number to gui and cli	Jon Hill	10 years ago
120	Minor bug fix on the find function Minor bug fix on the find function	Jon Hill	10 years ago
119	Making save more robust Making save more robust	Jon Hill	10 years ago
118	Fixing bug in data summary that leads to incorrect errors be... Fixing bug in data summary that leads to incorrect errors being reported. I have also fixed the siutation where a data summary might fail, but be good enough to display. If the second attempt fails a useful error message is given now.	Jon Hill	10 years ago
117	Bug fix for permute trees with quoted taxa with spaces as tr... Bug fix for permute trees with quoted taxa with spaces as treeview gives us	Jon Hill	10 years ago
116	Removing traceback debuggin gstatement Removing traceback debuggin gstatement	Jon Hill	10 years ago
115	Minor bug fix for permute trees whith quoted taxa Minor bug fix for permute trees whith quoted taxa	Jon Hill	10 years ago
114	Fix to the replace taxa functions. Now works on the enourmas... Fix to the replace taxa functions. Now works on the enourmas bird dataset. If it works on that, it should work on enything.	Jon Hill	10 years ago
113	Removing signal swapped attribute to get rid of the output n... Removing signal swapped attribute to get rid of the output noise	Jon Hill	10 years ago
112	Amending test to take into account requirement or seperating... Amending test to take into account requirement or seperating authors in old file format with and	Jon Hill	10 years ago
111	Adding windows installtion stuff Adding windows installtion stuff	Jon Hill	10 years ago
110	Minor bug fix for sub_taxa Minor bug fix for sub_taxa	Jon Hill	10 years ago
109	Make the character and optimality_criterion non-filled in wh... Make the character and optimality_criterion non-filled in when importing from bib.	Jon Hill	10 years ago
108	Adding capability to create subsets of data from existing ph... Adding capability to create subsets of data from existing phyml, based on characters, character types, year, taxa, analyses or fossil content.	Jon Hill	10 years ago
107	FIxing bug in the import routines. Volume was ignored and na... FIxing bug in the import routines. Volume was ignored and names were getting mangled	Jon Hill	10 years ago
106	Minor bug fix to import. Don't check the data - this can be ... Minor bug fix to import. Don't check the data - this can be done later.	Jon Hill	10 years ago
105	Adding convert file functionality which allows user to conve... Adding convert file functionality which allows user to convert to tnt, nexus, and for tree, newick. Input is any valid format. Had to refector the crea-Matrix to allow creation of a matrix string. More refactoring is probably needed as stk now calls "internal" supertree_toolkit functions _create_matrix_string and _amalgamate_trees. This is because we aren't dealing with PHYML files.	Jon Hill	10 years ago

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