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Published-Year: 2011
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Published-URL: http://www.nature.com/nmeth/journal/v8/n8/full/nmeth.1658.html
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Published-DOI: 10.1038/nmeth.1658
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Depends: catissuesuite
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License: to be clarified
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Homepage: https://cabig.nci.nih.gov/tools/catissuesuite
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Pkg-Description: tool for biospecimen inventory management
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CaTissue Suite is caBIG's biorepository tool for biospecimen inventory
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management, tracking, and annotation. This tool permits users to enter
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and retrieve data concerning the collection, storage, quality assurance,
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and distribution of biospecimens. caTissue Suite is sufficiently
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scalable and configurable for deployment across biospecimen resources of
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varying size and function, and that manage multiple types of
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biospecimens (tissue, biofluids, nucleic acid). The tool provides
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search functionality for both the biorepository staff and research
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scientist, who may be interested in searching for and requesting
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biospecimens for correlative science studies.
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caTissue Suite features include:
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* Customizable user roles and privileges structure to support multiple,
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independent repositories within a single caTissue installation.
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* Collection Protocol template creation allows representation of pre-defined
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specimen processing schemes and multiple study arms and time points in
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order to expedite data entry.
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* Patient study registration with duplicate patient checking algorithm.
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* Facilitated specimen accessioning, recording of processing events,
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creation and recording of biospecimen derivatives and aliquots.
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* Recording of biospecimen shipping and tracking events across repositories
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in a single caTissue installation.
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* Improved data form display for custom annotations (Dynamic Extensions
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tool), including new CAP checklist based forms for pathology annotation
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of major organ systems.
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* caTIES-like pathology report text annotation.
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* Advanced Query “Wizard”, allowing for the creation and saving of complex
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queries which can be run as pre-defined or parameterized searches.
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* Searches based on temporal relationships.
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* Specimen requisition and request tracking.
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