10
asn1 "Seqdesc.mol-type" ,
11
label "Molecule type" ,
17
asn1 "Seqdesc.modif" ,
25
asn1 "Seqdesc.modif.E" ,
30
asn1 "Seqdesc.method" ,
44
asn1 "Seqdesc.title" ,
55
use-template "StdOrgRef" } ,
57
asn1 "Seqdesc.comment" ,
68
use-template "StdNumbering" } ,
70
asn1 "Seqdesc.maploc" ,
71
label "Map location" ,
74
use-template "StdDbtag" } ,
82
asn1 "Seqdesc.genbank" ,
83
label "GenBank block" ,
86
use-template "StdGBBlock" } ,
92
use-template "StdPubdesc" } ,
94
asn1 "Seqdesc.region" ,
101
asn1 "Seqdesc.user" ,
105
use-template "StdUserObj" } ,
108
label "SWISS-PROT block" ,
113
asn1 "Seqdesc.dbxref" ,
114
label "Cross reference" ,
117
use-template "StdDbtag" } ,
119
asn1 "Seqdesc.embl" ,
125
asn1 "Seqdesc.create-date" ,
126
label "Create date" ,
130
printfunc "StdDatePrint" } } ,
132
asn1 "Seqdesc.update-date" ,
133
label "Update date" ,
137
printfunc "StdDatePrint" } } ,
158
asn1 "Seqdesc.source" ,
159
label "Biological Source" ,
162
use-template "StdBioSource" } ,
164
asn1 "Seqdesc.molinfo" ,
165
label "Molecule Information" ,
172
asn1 "MolInfo.biomol" ,
177
asn1 "MolInfo.tech" ,
182
asn1 "MolInfo.completeness" ,
187
name "StdSeqFeatLocation" ,
189
asn1 "Seq-feat.location" ,
194
printfunc "StdSeqLocPrint" } } } ,
196
name "StdSeqFeatProduct" ,
198
asn1 "Seq-feat.product" ,
203
printfunc "StdSeqLocPrint" } } } ,
205
name "EntrySeqFeatData" ,
206
labelfrom "Seq-feat.data" ,
208
asn1 "Seq-feat.data" ,
211
use-template "StdSeqFeatData" } } ,
214
labelfrom "Seq-feat.data" ,
224
asn1 "Seq-feat.data" ,
226
use-template "StdSeqFeatData" } ,
230
use-template "StdSeqFeatCommon" } ,
232
asn1 "Seq-feat.product" ,
237
printfunc "StdSeqLocPrint" } } ,
239
asn1 "Seq-feat.location" ,
244
printfunc "StdSeqLocPrint" } } ,
246
asn1 "Seq-feat.cit" ,
254
asn1 "Seq-feat.cit.pub.E" ,
256
use-template "StdPub" } } } } ,
258
asn1 "Seq-feat.xref" ,
259
label "Cross-reference" ,
266
asn1 "Seq-feat.xref.E" ,
268
use-template "StdSeqFeatXref" } } } } } } } } ,
270
name "StdSeqFeatData" ,
277
asn1 "SeqFeatData.gene" ,
280
use-template "StdGeneRef" } ,
282
asn1 "SeqFeatData.org" ,
285
use-template "StdOrgRef" } ,
287
asn1 "SeqFeatData.cdregion" ,
288
label "Coding Region" ,
290
use-template "StdCdRegion" } ,
292
asn1 "SeqFeatData.prot" ,
295
use-template "StdProtRef" } ,
297
asn1 "SeqFeatData.rna" ,
300
use-template "StdRNARef" } ,
302
asn1 "SeqFeatData.pub" ,
305
use-template "StdPubdesc" } ,
307
asn1 "SeqFeatData.seq" ,
311
printfunc "StdSeqLocPrint" } } ,
313
asn1 "SeqFeatData.imp.key" ,
316
use-template "StdImpFeat" } ,
318
asn1 "SeqFeatData.region" ,
324
asn1 "SeqFeatData.comment" ,
329
asn1 "SeqFeatData.bond" ,
335
asn1 "SeqFeatData.site" ,
341
asn1 "SeqFeatData.rsite" ,
344
use-template "StdRsiteRef" } ,
346
asn1 "SeqFeatData.user" ,
349
use-template "StdUserObj" } ,
351
asn1 "SeqFeatData.txinit" ,
354
use-template "StdTxInit" } ,
356
asn1 "SeqFeatData.num" ,
359
use-template "StdNumbering" } ,
361
asn1 "SeqFeatData.psec-str" ,
362
label "Sec. Struct" ,
367
asn1 "SeqFeatData.non-std-residue" ,
368
label "NonStd Residue" ,
373
asn1 "SeqFeatData.het" ,
379
asn1 "SeqFeatData.biosrc" ,
380
label "Biological Source" ,
383
use-template "StdBioSource" } } } } } ,
398
asn1 "Gene-ref.locus" ,
403
asn1 "Gene-ref.allele" ,
409
asn1 "Gene-ref.desc" ,
416
asn1 "Gene-ref.pseudo" ,
419
true "This is a pseudogene." } } ,
421
asn1 "Gene-ref.syn" ,
430
asn1 "Gene-ref.syn.E" ,
435
asn1 "Gene-ref.maploc" ,
436
label "Map Location" ,
443
label "Cross Reference" ,
450
asn1 "Gene-ref.db.E" ,
454
use-template "StdDbtag" } } } } } } } } ,
459
label "User-object" ,
466
asn1 "User-object.class" ,
471
asn1 "User-object.type" ,
473
use-template "StdObjectId" } } } } } ,
475
name "StdPubOnFeat" ,
487
use-template "StdPub" } } } } } ,
499
use-template "StdCitGen" } ,
503
use-template "StdCitSub" } ,
507
use-template "StdMedlineEntry" } ,
510
label "MEDLINE uid: " ,
516
label "PubMed id: " ,
523
use-template "StdCitArt" } ,
527
use-template "StdCitJour" } ,
531
use-template "StdCitBook" } ,
535
use-template "StdCitProc" } ,
539
use-template "StdCitPat" } ,
543
use-template "StdIdPat" } ,
547
use-template "StdCitLet" } ,
551
use-template "StdPubEquiv" } } } } } ,
561
asn1 "Cit-gen.serial-number" ,
568
asn1 "Cit-gen.authors" ,
570
use-template "StdAuthList" } ,
572
asn1 "Cit-gen.date" ,
577
printfunc "StdDatePrint" } } ,
579
asn1 "Cit-gen.title" ,
595
asn1 "Cit-gen.journal" ,
598
use-template "StdTitle" } ,
600
asn1 "Cit-gen.issue" ,
606
asn1 "Cit-gen.pages" ,
614
prefix "Data Submission " ,
619
asn1 "Cit-sub.medium" ,
626
asn1 "Cit-sub.imp.date" ,
631
printfunc "StdDatePrint" } } ,
633
asn1 "Cit-sub.authors" ,
636
use-template "StdAuthList" } } } } } ,
638
name "StdMedlineEntry" ,
640
asn1 "Medline-entry" ,
646
asn1 "Medline-entry" ,
652
asn1 "Medline-entry.uid" ,
659
asn1 "Medline-entry.em" ,
660
label "entry month" ,
664
printfunc "StdDatePrint" } } } } } ,
666
asn1 "Medline-entry.cit" ,
668
use-template "StdCitArt" } ,
670
asn1 "Medline-entry.abstract" ,
677
asn1 "Medline-entry.mesh" ,
685
asn1 "Medline-entry.mesh.E" ,
690
asn1 "Medline-mesh.term" ,
695
asn1 "Medline-mesh.mp" ,
698
true " (Main Point)" } } ,
700
asn1 "Medline-mesh.qual" ,
706
asn1 "Medline-mesh.qual.E" ,
711
asn1 "Medline-qual.subh" ,
716
asn1 "Medline-qual.mp" ,
719
true " (Main Point)" } } } } } } } } } } } } } } ,
721
asn1 "Medline-entry.substance" ,
729
asn1 "Medline-entry.substance.E" ,
734
asn1 "Medline-rn.name" ,
739
asn1 "Medline-rn.type" ,
747
asn1 "Medline-rn.cit" ,
752
asn1 "Medline-entry.xref" ,
753
label "Cross Reference" ,
760
asn1 "Medline-entry.xref.E" ,
766
asn1 "Medline-si.type" ,
771
asn1 "Medline-si.cit" ,
776
asn1 "Medline-entry.gene" ,
777
label "Possible Gene Symbols" ,
784
asn1 "Medline-entry.gene.E" ,
789
asn1 "Medline-entry.idnum" ,
797
asn1 "Medline-entry.idnum.E" ,
810
asn1 "Cit-art.title" ,
812
use-template "StdTitle" } ,
814
asn1 "Cit-art.authors" ,
816
use-template "StdAuthList" } ,
818
asn1 "Cit-art.from.journal" ,
820
use-template "StdCitJour" } ,
822
asn1 "Cit-art.from.book" ,
825
use-template "StdCitBook" } ,
827
asn1 "Cit-art.from.proc" ,
830
use-template "StdCitProc" } } } } } ,
840
asn1 "Cit-jour.title" ,
842
use-template "StdTitle" } ,
844
asn1 "Cit-jour.imp" ,
846
use-template "StdImprint" } } } } } ,
856
asn1 "Cit-book.title" ,
858
use-template "StdTitle" } ,
860
asn1 "Cit-book.coll" ,
861
prefix "Collection: " ,
863
use-template "StdTitle" } ,
865
asn1 "Cit-book.authors" ,
867
use-template "StdAuthList" } ,
869
asn1 "Cit-book.imp" ,
871
use-template "StdImprint" } } } } } ,
881
asn1 "Cit-proc.book" ,
883
use-template "StdCitBook" } ,
885
asn1 "Cit-proc.meet" ,
892
asn1 "Meeting.number" ,
897
asn1 "Meeting.date" ,
900
printfunc "StdDatePrint" } } ,
902
asn1 "Meeting.place" ,
904
use-template "StdAffil" } } } } } } } } ,
914
asn1 "Cit-pat.title" ,
919
asn1 "Cit-pat.authors" ,
921
use-template "StdAuthList" } ,
928
asn1 "Cit-pat.country" ,
934
asn1 "Cit-pat.doc-type" ,
939
asn1 "Cit-pat.number" ,
944
asn1 "Cit-pat.date-issue" ,
949
printfunc "StdDatePrint" } } ,
951
asn1 "Cit-pat.app-number" ,
957
asn1 "Cit-pat.app-date" ,
962
printfunc "StdDatePrint" } } } } } } } } } ,
971
asn1 "Id-pat.country" ,
977
asn1 "Id-pat.id.number" ,
982
asn1 "Id-pat.id.app-number" ,
996
asn1 "Cit-let.type" ,
1003
asn1 "Cit-let.man-id" ,
1008
asn1 "Cit-let.cit" ,
1010
use-template "StdCitBook" } } } } } ,
1012
name "StdPubEquiv" ,
1020
asn1 "Pub-equiv.E" ,
1022
use-template "StdPub" } } } } } ,
1032
asn1 "Title.E.trans" ,
1039
asn1 "Title.E.name" ,
1044
asn1 "Title.E.tsub" ,
1049
asn1 "Title.E.abr" ,
1054
asn1 "Title.E.iso-jta" ,
1059
asn1 "Title.E.ml-jta" ,
1066
asn1 "Title.E.jta" ,
1073
asn1 "Title.E.issn" ,
1080
asn1 "Title.E.coden" ,
1087
asn1 "Title.E.isbn" ,
1094
name "StdAuthList" ,
1105
printfunc "StdAuthListNamesPrint" } } ,
1107
asn1 "Auth-list.affil" ,
1109
use-template "StdAffil" } } } } } ,
1124
asn1 "Affil.std.affil" ,
1129
asn1 "Affil.std.div" ,
1134
asn1 "Affil.std.street" ,
1145
asn1 "Affil.std.city" ,
1150
asn1 "Affil.std.sub" ,
1155
asn1 "Affil.std.country" ,
1167
asn1 "Imprint.date" ,
1172
printfunc "StdDatePrint" } } ,
1174
asn1 "Imprint.volume" ,
1179
asn1 "Imprint.issue" ,
1186
asn1 "Imprint.section" ,
1193
asn1 "Imprint.part-sup" ,
1200
asn1 "Imprint.pages" ,
1206
asn1 "Imprint.prepub" ,
1213
asn1 "Imprint.pub" ,
1214
label "\nPublisher: " ,
1216
use-template "StdAffil" } ,
1218
asn1 "Imprint.cprt" ,
1219
label " Copyright: " ,
1222
printfunc "StdDatePrint" } } } } } } ,
1224
name "StdSeqFeatXref" ,
1226
asn1 "SeqFeatXref" ,
1232
asn1 "SeqFeatXref.id" ,
1235
use-template "StdFeatId" } ,
1237
asn1 "SeqFeatXref.data" ,
1239
use-template "StdSeqFeatData" } } } } } ,
1257
asn1 "Org-ref.taxname" ,
1262
asn1 "Org-ref.common" ,
1269
asn1 "Org-ref.mod" ,
1278
asn1 "Org-ref.mod.E" ,
1284
label "Cross Reference" ,
1291
asn1 "Org-ref.db.E" ,
1295
use-template "StdDbtag" } } } } ,
1297
asn1 "Org-ref.syn" ,
1306
asn1 "Org-ref.syn.E" ,
1311
name "StdBioSource" ,
1320
asn1 "BioSource.genome" ,
1325
asn1 "BioSource.org" ,
1328
use-template "StdOrgRef" } } } } } ,
1330
name "StdCdRegion" ,
1339
asn1 "Cdregion.orf" ,
1342
true "Uncharacterized Open Reading Frame" } } ,
1344
asn1 "Cdregion.frame" ,
1345
label "Reading Frame = " ,
1350
asn1 "Cdregion.code" ,
1351
label "Genetic Code: " ,
1358
asn1 "Genetic-code.E.name" ,
1363
asn1 "Genetic-code.E.id" ,
1369
asn1 "Cdregion.conflict" ,
1372
true "Translation conflicts with protein sequence" } } ,
1374
asn1 "Cdregion.stops" ,
1375
prefix "Translation contains " ,
1376
suffix " stop codons" ,
1381
asn1 "Cdregion.gaps" ,
1382
prefix "Translation contains " ,
1383
suffix " gaps when aligned to protein" ,
1388
asn1 "Cdregion.mismatch" ,
1389
prefix "Translation contains " ,
1390
suffix " mismatches when aligned to protein" ,
1404
asn1 "Prot-ref.name" ,
1410
asn1 "Prot-ref.name.E" ,
1415
asn1 "Prot-ref.desc" ,
1422
asn1 "Prot-ref.processed" ,
1427
asn1 "Prot-ref.ec" ,
1435
asn1 "Prot-ref.ec.E" ,
1440
asn1 "Prot-ref.activity" ,
1448
asn1 "Prot-ref.activity.E" ,
1453
asn1 "Prot-ref.db" ,
1454
label "Cross Reference" ,
1461
asn1 "Prot-ref.db.E" ,
1465
use-template "StdDbtag" } } } } } } } } ,
1476
asn1 "RNA-ref.type" ,
1481
asn1 "RNA-ref.pseudo" ,
1484
true "This is an RNA pseudogene." } } ,
1486
asn1 "RNA-ref.ext.name" ,
1500
asn1 "Pubdesc.pub" ,
1502
use-template "StdPubEquiv" } ,
1505
prefix "In this article:\n" ,
1511
asn1 "Pubdesc.name" ,
1517
asn1 "Pubdesc.fig" ,
1523
asn1 "Pubdesc.poly-a" ,
1526
true "poly(A) shown" } } ,
1528
asn1 "Pubdesc.maploc" ,
1529
label "map location=" ,
1534
asn1 "Pubdesc.num" ,
1536
use-template "StdNumbering" } ,
1538
asn1 "Pubdesc.numexc" ,
1541
true "numbering inconsistent" } } } } } ,
1543
asn1 "Pubdesc.comment" ,
1550
asn1 "Imp-feat.key" ,
1556
name "StdRsiteRef" ,
1564
asn1 "Rsite-ref.str" ,
1569
asn1 "Rsite-ref.std" ,
1571
use-template "StdDbtag" } } } } } ,
1581
asn1 "Txinit.name" ,
1586
name "StdNumbering" ,
1596
label "GenBank-block" ,
1602
asn1 "GB-block.extra-accessions" ,
1603
label "Extra accessions" ,
1611
asn1 "GB-block.extra-accessions.E" ,
1616
asn1 "GB-block.keywords" ,
1625
asn1 "GB-block.keywords.E" ,
1630
asn1 "GB-block.source" ,
1636
asn1 "GB-block.origin" ,
1642
asn1 "GB-block.div" ,
1643
label "Division: " ,
1648
asn1 "GB-block.taxonomy" ,
1649
label "Taxonomy: " ,
1654
asn1 "GB-block.date" ,
1660
asn1 "GB-block.entry-date" ,
1661
label "Entry date: " ,
1664
printfunc "StdDatePrint" } } } } } } ,
1673
asn1 "Feat-id.gibb" ,
1674
label "GenInfo Backbone: " ,
1679
asn1 "Feat-id.giim.id" ,
1680
label "GenInfo Import Id: " ,
1685
asn1 "Feat-id.local" ,
1688
use-template "StdObjectId" } ,
1690
asn1 "Feat-id.general" ,
1692
use-template "StdDbtag" } } } } } ,
1694
name "StdSeqFeatCommon" ,
1702
asn1 "Seq-feat.id" ,
1705
use-template "StdFeatId" } ,
1707
asn1 "Seq-feat.title" ,
1719
asn1 "Seq-feat.partial" ,
1722
true "Partial" } } ,
1724
asn1 "Seq-feat.except" ,
1727
true "Biological Exception" } } ,
1729
asn1 "Seq-feat.exp-ev" ,
1736
asn1 "Seq-feat.comment" ,
1741
asn1 "Seq-feat.ext" ,
1743
use-template "StdUserObj" } ,
1745
asn1 "Seq-feat.qual" ,
1746
label "Qualifiers" ,
1753
asn1 "Seq-feat.qual.E" ,
1760
asn1 "Gb-qual.qual" ,
1765
asn1 "Gb-qual.val" ,
1768
} } } } } } } } } } } } ,
1785
use-template "StdObjectId" } } } } } ,
1787
name "StdObjectId" ,
1794
asn1 "Object-id.id" ,
1799
asn1 "Object-id.str" ,
added
removed
data/objprt.prt
