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  • Committer: Bazaar Package Importer
  • Author(s): Charles Plessy
  • Date: 2011-06-17 13:51:18 UTC
  • mfrom: (3.1.6 sid)
  • Revision ID: james.westby@ubuntu.com-20110617135118-hncy38e0134j8oi5
Tags: 1.6.901-1
* New upstream release.
* Point debian/watch to search.cpan.org.
* Build using dh and overrides:
  - Use Debhelper 8 (debian/rules, debian/control).
  - Simplified debian/rules.
* Split into libbio-perl-perl, as discussed with the Debian Perl team.
  (debian/control, debian/bioperl.install, debian libbio-perl-perl.install)
* debian/control:
  - Incremented Standards-Version to reflect conformance with Policy 3.9.2.
    No other changes needed.
  - Vcs-Browser URL made redirectable to viewvc.
  - Removed useless ‘svn’ in the Vcs-Svn URL.

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t/data/test.fastq
 
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GTTAGCTCCCACCTTAAGATGTTTA
 
3
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4
SXXTXXXXXXXXXTTSUXSSXKTMQ
 
5
@FC12044_91407_8_200_720_610
 
6
CTCTGTGGCACCCCATCCCTCACTT
 
7
+FC12044_91407_8_200_720_610
 
8
OXXXXXXXXXXXXXXXXXTSXQTXU
 
9
@FC12044_91407_8_200_345_133
 
10
GATTTTTTAACAATAAACGTACATA
 
11
+FC12044_91407_8_200_345_133
 
12
OQTOOSFORTFFFIIOFFFFFFFFF
 
13
@FC12044_91407_8_200_106_131
 
14
GTTGCCCAGGCTCGTCTTGAACTCC
 
15
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16
XXXXXXXXXXXXXXSXXXXISTXQS
 
17
@FC12044_91407_8_200_916_471
 
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TGATTGAAGGTAGGGTAGCATACTG
 
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20
XXXXXXXXXXXXXXXUXXUSXXTXW
 
21
@FC12044_91407_8_200_57_85
 
22
GCTCCAATAGCGCAGAGGAAACCTG
 
23
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24
XFXMXSXXSXXXOSQROOSROFQIQ
 
25
@FC12044_91407_8_200_10_437
 
26
GCTGCTTGGGAGGCTGAGGCAGGAG
 
27
+FC12044_91407_8_200_10_437
 
28
USXSXXXXXXUXXXSXQXXUQXXKS
 
29
@FC12044_91407_8_200_154_436
 
30
AGACCTTTGGATACAATGAACGACT
 
31
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32
MKKMQTSRXMSQTOMRFOOIFFFFF
 
33
@FC12044_91407_8_200_336_64
 
34
AGGGAATTTTAGAGGAGGGCTGCCG
 
35
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36
STQMOSXSXSQXQXXKXXXKFXFFK
 
37
@FC12044_91407_8_200_620_233
 
38
TCTCCATGTTGGTCAGGCTGGTCTC
 
39
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40
XXXXXXXXXXXXXXXXXXXXXSXSW
 
41
@FC12044_91407_8_200_902_349
 
42
TGAACGTCGAGACGCAAGGCCCGCC
 
43
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44
XMXSSXMXXSXQSXTSQXFKSKTOF
 
45
@FC12044_91407_8_200_40_618
 
46
CTGTCCCCACGGCGGGGGGGCCTGG
 
47
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48
TXXXXSXXXXXXXXXXXXXRKFOXS
 
49
@FC12044_91407_8_200_83_511
 
50
GATGTACTCTTACACCCAGACTTTG
 
51
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52
SOXXXXXUXXXXXXQKQKKROOQSU
 
53
@FC12044_91407_8_200_76_246
 
54
TCAAGGGTGGATCTTGGCTCCCAGT
 
55
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56
XTXTUXXXXXRXXXTXXSUXSRFXQ
 
57
@FC12044_91407_8_200_303_427
 
58
TTGCGACAGAGTTTTGCTCTTGTCC
 
59
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60
XXQROXXXXIXFQXXXOIQSSXUFF
 
61
@FC12044_91407_8_200_31_299
 
62
TCTGCTCCAGCTCCAAGACGCCGCC
 
63
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64
XRXTSXXXRXXSXQQOXQTSQSXKQ
 
65
@FC12044_91407_8_200_553_135
 
66
TACGGAGCCGCGGGCGGGAAAGGCG
 
67
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68
XSQQXXXXXXXXXXSXXMFFQXTKU
 
69
@FC12044_91407_8_200_139_74
 
70
CCTCCCAGGTTCAAGCGATTATCCT
 
71
+FC12044_91407_8_200_139_74
 
72
RMXUSXTXXQXXQUXXXSQISISSO
 
73
@FC12044_91407_8_200_108_33
 
74
GTCATGGCGGCCCGCGCGGGGAGCG
 
75
+FC12044_91407_8_200_108_33
 
76
OOOSSXXSXXOMKMOFMKFOKFFFF
 
77
@FC12044_91407_8_200_980_965
 
78
ACAGTGGGTTCTTAAAGAAGAGTCG
 
79
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80
TOSSRXXXSSMSXMOMXIRXOXFFS
 
81
@FC12044_91407_8_200_981_857
 
82
AACGAGGGGCGCGACTTGACCTTGG
 
83
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84
RXMSSXXXXSXQXQXFSXQFQKMXS
 
85
@FC12044_91407_8_200_8_865
 
86
TTTCCCACCCCAGGAAGCCTTGGAC
 
87
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88
XXXFKOROMKOORMIMRIIKKORFF
 
89
@FC12044_91407_8_200_292_484
 
90
TCAGCCTCCGTGCCCAGCCCACTCC
 
91
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92
XQXOSXXXXXUXXXXIXXXXQTOXF
 
93
@FC12044_91407_8_200_675_16
 
94
CTCGGGAGGCTGAGGCAGGGGGGTT
 
95
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96
OXTXXXSXXQXXOXXKMXXMXOKQF
 
97
@FC12044_91407_8_200_285_136
 
98
CCAAATCTTGAATTGTAGCTCCCCT
 
99
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100
OSXOQXXXXXSXXUXXTXXXXTRMS