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Committer: Package Import Robot
Author(s): Olivier Sallou
Date: 2012-09-21 17:00:12 UTC
mfrom: (2.1.5 sid)
Revision ID: package-import@ubuntu.com-20120921170012-zg3e46ivy2tc0ev2

Tags: 0.62.1-1

New upstream release

files added:
.pc/.quilt_patches

.pc/.quilt_series

CITATION

data/karyotype/assembly/README

data/karyotype/assembly/bostau7.txt

data/karyotype/assembly/canfam2.txt

data/karyotype/assembly/felcat4.txt

data/karyotype/assembly/karyotype.cat.txt

data/karyotype/assembly/karyotype.cow.txt

data/karyotype/assembly/karyotype.dog.txt

data/karyotype/assembly/karyotype.horse.txt

debian/fonts-circos-symbols.install

example/data

example/data/genes.txt

example/data/heatmap.hs.mm.10e6.txt

example/data/heatmap.hs.mm.20e6.txt

example/data/heatmap.hs.mm.50e6.txt

example/data/heatmap.hs.mm.5e6.txt

example/data/heatmap.hs.rn.10e6.txt

example/data/heatmap.hs.rn.20e6.txt

example/data/heatmap.hs.rn.50e6.txt

example/data/heatmap.hs.rn.5e6.txt

example/data/heatmap.mm.1e6.hs.1.txt

example/data/heatmap.mm.1e6.hs.10.txt

example/data/heatmap.mm.1e6.hs.11.txt

example/data/heatmap.mm.1e6.hs.12.txt

example/data/heatmap.mm.1e6.hs.13.txt

example/data/heatmap.mm.1e6.hs.14.txt

example/data/heatmap.mm.1e6.hs.15.txt

example/data/heatmap.mm.1e6.hs.16.txt

example/data/heatmap.mm.1e6.hs.17.txt

example/data/heatmap.mm.1e6.hs.18.txt

example/data/heatmap.mm.1e6.hs.19.txt

example/data/heatmap.mm.1e6.hs.2.txt

example/data/heatmap.mm.1e6.hs.20.txt

example/data/heatmap.mm.1e6.hs.21.txt

example/data/heatmap.mm.1e6.hs.22.txt

example/data/heatmap.mm.1e6.hs.3.txt

example/data/heatmap.mm.1e6.hs.4.txt

example/data/heatmap.mm.1e6.hs.5.txt

example/data/heatmap.mm.1e6.hs.6.txt

example/data/heatmap.mm.1e6.hs.7.txt

example/data/heatmap.mm.1e6.hs.8.txt

example/data/heatmap.mm.1e6.hs.9.txt

example/data/heatmap.mm.5e6.hs.1.txt

example/data/heatmap.mm.5e6.hs.10.txt

example/data/heatmap.mm.5e6.hs.11.txt

example/data/heatmap.mm.5e6.hs.12.txt

example/data/heatmap.mm.5e6.hs.13.txt

example/data/heatmap.mm.5e6.hs.14.txt

example/data/heatmap.mm.5e6.hs.15.txt

example/data/heatmap.mm.5e6.hs.16.txt

example/data/heatmap.mm.5e6.hs.17.txt

example/data/heatmap.mm.5e6.hs.18.txt

example/data/heatmap.mm.5e6.hs.19.txt

example/data/heatmap.mm.5e6.hs.2.txt

example/data/heatmap.mm.5e6.hs.20.txt

example/data/heatmap.mm.5e6.hs.21.txt

example/data/heatmap.mm.5e6.hs.22.txt

example/data/heatmap.mm.5e6.hs.3.txt

example/data/heatmap.mm.5e6.hs.4.txt

example/data/heatmap.mm.5e6.hs.5.txt

example/data/heatmap.mm.5e6.hs.6.txt

example/data/heatmap.mm.5e6.hs.7.txt

example/data/heatmap.mm.5e6.hs.8.txt

example/data/heatmap.mm.5e6.hs.9.txt

example/data/heatmap.rn.1e6.hs.1.txt

example/data/heatmap.rn.1e6.hs.10.txt

example/data/heatmap.rn.1e6.hs.11.txt

example/data/heatmap.rn.1e6.hs.12.txt

example/data/heatmap.rn.1e6.hs.13.txt

example/data/heatmap.rn.1e6.hs.14.txt

example/data/heatmap.rn.1e6.hs.15.txt

example/data/heatmap.rn.1e6.hs.16.txt

example/data/heatmap.rn.1e6.hs.17.txt

example/data/heatmap.rn.1e6.hs.18.txt

example/data/heatmap.rn.1e6.hs.19.txt

example/data/heatmap.rn.1e6.hs.2.txt

example/data/heatmap.rn.1e6.hs.20.txt

example/data/heatmap.rn.1e6.hs.21.txt

example/data/heatmap.rn.1e6.hs.22.txt

example/data/heatmap.rn.1e6.hs.3.txt

example/data/heatmap.rn.1e6.hs.4.txt

example/data/heatmap.rn.1e6.hs.5.txt

example/data/heatmap.rn.1e6.hs.6.txt

example/data/heatmap.rn.1e6.hs.7.txt

example/data/heatmap.rn.1e6.hs.8.txt

example/data/heatmap.rn.1e6.hs.9.txt

example/data/heatmap.rn.5e6.hs.1.txt

example/data/heatmap.rn.5e6.hs.10.txt

example/data/heatmap.rn.5e6.hs.11.txt

example/data/heatmap.rn.5e6.hs.12.txt

example/data/heatmap.rn.5e6.hs.13.txt

example/data/heatmap.rn.5e6.hs.14.txt

example/data/heatmap.rn.5e6.hs.15.txt

example/data/heatmap.rn.5e6.hs.16.txt

example/data/heatmap.rn.5e6.hs.17.txt

example/data/heatmap.rn.5e6.hs.18.txt

example/data/heatmap.rn.5e6.hs.19.txt

example/data/heatmap.rn.5e6.hs.2.txt

example/data/heatmap.rn.5e6.hs.20.txt

example/data/heatmap.rn.5e6.hs.21.txt

example/data/heatmap.rn.5e6.hs.22.txt

example/data/heatmap.rn.5e6.hs.3.txt

example/data/heatmap.rn.5e6.hs.4.txt

example/data/heatmap.rn.5e6.hs.5.txt

example/data/heatmap.rn.5e6.hs.6.txt

example/data/heatmap.rn.5e6.hs.7.txt

example/data/heatmap.rn.5e6.hs.8.txt

example/data/heatmap.rn.5e6.hs.9.txt

example/data/highlights.txt

example/data/mm.bundle.txt

example/data/mm.chain.txt

example/data/rn.bundle.txt

files removed:
data/karyotype/assembly/horse.txt

data/karyotype/assembly/karyotype.horse.ec2.txt

data/karyotype/karyotype.horse.ec2.txt

debian/otf-symbols-circos.install

example/exampledata

example/exampledata/genes.txt

example/exampledata/heatmap.hs.mm.10e6.txt

example/exampledata/heatmap.hs.mm.20e6.txt

example/exampledata/heatmap.hs.mm.50e6.txt

example/exampledata/heatmap.hs.mm.5e6.txt

example/exampledata/heatmap.hs.rn.10e6.txt

example/exampledata/heatmap.hs.rn.20e6.txt

example/exampledata/heatmap.hs.rn.50e6.txt

example/exampledata/heatmap.hs.rn.5e6.txt

example/exampledata/heatmap.mm.1e6.hs.1.txt

example/exampledata/heatmap.mm.1e6.hs.10.txt

example/exampledata/heatmap.mm.1e6.hs.11.txt

example/exampledata/heatmap.mm.1e6.hs.12.txt

example/exampledata/heatmap.mm.1e6.hs.13.txt

example/exampledata/heatmap.mm.1e6.hs.14.txt

example/exampledata/heatmap.mm.1e6.hs.15.txt

example/exampledata/heatmap.mm.1e6.hs.16.txt

example/exampledata/heatmap.mm.1e6.hs.17.txt

example/exampledata/heatmap.mm.1e6.hs.18.txt

example/exampledata/heatmap.mm.1e6.hs.19.txt

example/exampledata/heatmap.mm.1e6.hs.2.txt

example/exampledata/heatmap.mm.1e6.hs.20.txt

example/exampledata/heatmap.mm.1e6.hs.21.txt

example/exampledata/heatmap.mm.1e6.hs.22.txt

example/exampledata/heatmap.mm.1e6.hs.3.txt

example/exampledata/heatmap.mm.1e6.hs.4.txt

example/exampledata/heatmap.mm.1e6.hs.5.txt

example/exampledata/heatmap.mm.1e6.hs.6.txt

example/exampledata/heatmap.mm.1e6.hs.7.txt

example/exampledata/heatmap.mm.1e6.hs.8.txt

example/exampledata/heatmap.mm.1e6.hs.9.txt

example/exampledata/heatmap.mm.5e6.hs.1.txt

example/exampledata/heatmap.mm.5e6.hs.10.txt

example/exampledata/heatmap.mm.5e6.hs.11.txt

example/exampledata/heatmap.mm.5e6.hs.12.txt

example/exampledata/heatmap.mm.5e6.hs.13.txt

example/exampledata/heatmap.mm.5e6.hs.14.txt

example/exampledata/heatmap.mm.5e6.hs.15.txt

example/exampledata/heatmap.mm.5e6.hs.16.txt

example/exampledata/heatmap.mm.5e6.hs.17.txt

example/exampledata/heatmap.mm.5e6.hs.18.txt

example/exampledata/heatmap.mm.5e6.hs.19.txt

example/exampledata/heatmap.mm.5e6.hs.2.txt

example/exampledata/heatmap.mm.5e6.hs.20.txt

example/exampledata/heatmap.mm.5e6.hs.21.txt

example/exampledata/heatmap.mm.5e6.hs.22.txt

example/exampledata/heatmap.mm.5e6.hs.3.txt

example/exampledata/heatmap.mm.5e6.hs.4.txt

example/exampledata/heatmap.mm.5e6.hs.5.txt

example/exampledata/heatmap.mm.5e6.hs.6.txt

example/exampledata/heatmap.mm.5e6.hs.7.txt

example/exampledata/heatmap.mm.5e6.hs.8.txt

example/exampledata/heatmap.mm.5e6.hs.9.txt

example/exampledata/heatmap.rn.1e6.hs.1.txt

example/exampledata/heatmap.rn.1e6.hs.10.txt

example/exampledata/heatmap.rn.1e6.hs.11.txt

example/exampledata/heatmap.rn.1e6.hs.12.txt

example/exampledata/heatmap.rn.1e6.hs.13.txt

example/exampledata/heatmap.rn.1e6.hs.14.txt

example/exampledata/heatmap.rn.1e6.hs.15.txt

example/exampledata/heatmap.rn.1e6.hs.16.txt

example/exampledata/heatmap.rn.1e6.hs.17.txt

example/exampledata/heatmap.rn.1e6.hs.18.txt

example/exampledata/heatmap.rn.1e6.hs.19.txt

example/exampledata/heatmap.rn.1e6.hs.2.txt

example/exampledata/heatmap.rn.1e6.hs.20.txt

example/exampledata/heatmap.rn.1e6.hs.21.txt

example/exampledata/heatmap.rn.1e6.hs.22.txt

example/exampledata/heatmap.rn.1e6.hs.3.txt

example/exampledata/heatmap.rn.1e6.hs.4.txt

example/exampledata/heatmap.rn.1e6.hs.5.txt

example/exampledata/heatmap.rn.1e6.hs.6.txt

example/exampledata/heatmap.rn.1e6.hs.7.txt

example/exampledata/heatmap.rn.1e6.hs.8.txt

example/exampledata/heatmap.rn.1e6.hs.9.txt

example/exampledata/heatmap.rn.5e6.hs.1.txt

example/exampledata/heatmap.rn.5e6.hs.10.txt

example/exampledata/heatmap.rn.5e6.hs.11.txt

example/exampledata/heatmap.rn.5e6.hs.12.txt

example/exampledata/heatmap.rn.5e6.hs.13.txt

example/exampledata/heatmap.rn.5e6.hs.14.txt

example/exampledata/heatmap.rn.5e6.hs.15.txt

example/exampledata/heatmap.rn.5e6.hs.16.txt

example/exampledata/heatmap.rn.5e6.hs.17.txt

example/exampledata/heatmap.rn.5e6.hs.18.txt

example/exampledata/heatmap.rn.5e6.hs.19.txt

example/exampledata/heatmap.rn.5e6.hs.2.txt

example/exampledata/heatmap.rn.5e6.hs.20.txt

example/exampledata/heatmap.rn.5e6.hs.21.txt

example/exampledata/heatmap.rn.5e6.hs.22.txt

example/exampledata/heatmap.rn.5e6.hs.3.txt

example/exampledata/heatmap.rn.5e6.hs.4.txt

example/exampledata/heatmap.rn.5e6.hs.5.txt

example/exampledata/heatmap.rn.5e6.hs.6.txt

example/exampledata/heatmap.rn.5e6.hs.7.txt

example/exampledata/heatmap.rn.5e6.hs.8.txt

example/exampledata/heatmap.rn.5e6.hs.9.txt

example/exampledata/highlights.txt

example/exampledata/karyotype.human.txt

example/exampledata/karyotype.mouse.txt

example/exampledata/karyotype.rat.txt

example/exampledata/mm.bundle.txt

example/exampledata/mm.chain.txt

example/exampledata/rn.bundle.txt

example/exampledata/rn.chain.txt

lib/Circos/#PNG.pm#

files modified:
.pc/configpath_add_etc/lib/Circos/Configuration.pm

.pc/configpath_add_etc/lib/Circos/Utils.pm

.pc/fix_examples/example/etc/circos.conf

.pc/fix_examples/example/run

CHANGES

README.tutorials

data/karyotype/assembly/parse.assembly

debian/changelog

debian/circos.examples

debian/control

debian/copyright

debian/patches/configpath_add_etc

debian/patches/fix_examples

debian/watch

etc/colors.ucsc.conf

etc/housekeeping.conf

example/circos.png

example/circos.svg

example/etc/circos.conf

example/etc/highlights.conf

example/etc/karyotype.and.layout.conf

example/etc/mmchain.conf

example/etc/mmchain.scatter.conf

example/etc/rnchain.conf

example/etc/rnchain.scatter.conf

example/run

example/run.out

lib/Circos.pm

lib/Circos/Colors.pm

lib/Circos/Configuration.pm

lib/Circos/Error.pm

lib/Circos/Expression.pm

lib/Circos/Karyotype.pm

lib/Circos/SVG.pm

lib/Circos/Unit.pm

lib/Circos/Utils.pm

Show diffs side-by-side

added added

removed removed

example/etc/mmchain.conf

1

1

<plot>

2

2

pre_increment_counter = mmchain:1

3

file = exampledata/heatmap.mm.5e6.hs.__$CONF{counter}{mmchain}__.txt

3

file = data/heatmap.mm.5e6.hs.__$CONF{counter}{mmchain}__.txt

4

4

show = __$CONF{show_heatmaps}__

5

5

type = heatmap

6

6

min = 6000

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