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  • Committer: Package Import Robot
  • Author(s): The Debichem Group
  • Date: 2013-08-28 13:42:19 UTC
  • mfrom: (1.1.2)
  • Revision ID: package-import@ubuntu.com-20130828134219-2w0p8unqlgysyt6d
Tags: 1.7-1
* New upstream release.
* debian/control.in:
  - use canonical URI in Vcs-Git/Vcs-Browser.
  - set debhelper (>= 9)
* Uploaded by Filippo Rusconi <lopippo@debian.org>.

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man/readBrukerFlexFile.Rd
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\usage{
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  readBrukerFlexFile(fidFile, removeMetaData = FALSE,
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    useHpc = TRUE, filterZeroIntensities = FALSE,
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    verbose = FALSE)
 
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    keepNegativeIntensities = FALSE, verbose = FALSE)
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}
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\arguments{
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  \item{fidFile}{\code{character}, path to \emph{fid} file
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  it.  If \code{TRUE} all intensities equal \code{0.0} are
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  removed.  (see also: \sQuote{Details} section)}
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  \item{keepNegativeIntensities}{\code{logical}, don't
 
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  change it.  If \code{FALSE} all intensities less than
 
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  zero are replaced by zero.  (see also: \sQuote{Details}
 
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  section)}
 
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  \item{verbose}{\code{logical}, print verbose messages?}
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}
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\value{
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  operation time and to keep export file sizes small,
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  CompassXport 3.0.3 will filter out zero (0.0) intensities
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  when exporting to mzXML or mzData \ldots}
 
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  \code{keepNegativeIntensities}: Change default value is
 
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  \bold{not recommended}! If \code{TRUE} negative intensity
 
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  values are not replaced by zero. This parameter exists
 
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  only to be compatible to Bruker Daltonics CompassXport.
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}
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\examples{
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## load library
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plot(spec$spectrum$mass, spec$spectrum$intensity, type="l", col="red")
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}
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\seealso{
 
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  \url{https://github.com/sgibb/readBrukerFlexData/wiki},
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  \code{\link[readBrukerFlexData]{readBrukerFlexDir}},
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  \code{\link[readBrukerFlexData]{.hpc}}
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}