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  • Committer: Package Import Robot
  • Author(s): Filippo Rusconi
  • Date: 2013-12-20 11:30:16 UTC
  • mfrom: (5.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20131220113016-wre5g9bteeheq6he
Tags: 1.11.1-3
* remove version number from libbost development package names;
* ensure that AUTHORS is correctly shipped in all packages.

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doc/html/classOpenMS_1_1TraceFitter-members.html
 
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<HTML>
 
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<HEAD>
 
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<TITLE>Member List</TITLE>
 
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<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
 
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<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
 
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</HEAD>
 
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<BODY BGCOLOR="#FFFFFF">
 
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<A href="index.html">Home</A> &nbsp;&middot;
 
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<A href="classes.html">Classes</A> &nbsp;&middot;
 
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<A href="annotated.html">Annotated Classes</A> &nbsp;&middot;
 
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<A href="modules.html">Modules</A> &nbsp;&middot;
 
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<A href="functions_func.html">Members</A> &nbsp;&middot;
 
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<A href="namespaces.html">Namespaces</A> &nbsp;&middot;
 
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<A href="pages.html">Related Pages</A>
 
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<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
 
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<!-- Generated by Doxygen 1.8.5 -->
 
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<div id="nav-path" class="navpath">
 
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  <ul>
 
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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter</a></li>  </ul>
 
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</div>
 
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</div><!-- top -->
 
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<div class="header">
 
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  <div class="headertitle">
 
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<div class="title">TraceFitter&lt; PeakType &gt; Member List</div>  </div>
 
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</div><!--header-->
 
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<div class="contents">
 
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<p>This is the complete list of members for <a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a>, including all inherited members.</p>
 
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<table class="directory">
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a7c3b265b697a57615da5cd3274780efd">check_defaults_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#af72d2c9ae5ecbd8b8d4605fbbef613cc">checkMaximalRTSpan</a>(const DoubleReal max_rt_span)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a2190523e8d48946faff97a41131fcf92">checkMinimalRTSpan</a>(const std::pair&lt; DoubleReal, DoubleReal &gt; &amp;rt_bounds, const DoubleReal min_rt_span)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a65120f4f127d69944775cd5aae06709f">computeTheoretical</a>(const FeatureFinderAlgorithmPickedHelperStructs::MassTrace&lt; PeakType &gt; &amp;trace, Size k)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#afb6802fda161cb0c1a4a05597f94aecc">DefaultParamHandler</a>(const String &amp;name)</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a954da7eef3cfddda446574eaadd20abb">DefaultParamHandler</a>(const DefaultParamHandler &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a761b1937850c141d0c6fff0e4d633a04">defaults_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a2802c591e6d7fd3fd9cc35f5e875d0ba">defaultsToParam_</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a7914deb9fb6c8400f80b3532aa2e7b73">epsilon_abs_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a5430cfbbe8dd77a2709a1442ca25a9db">epsilon_rel_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a5a51f3f150b09068256195e934339a19">error_name_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a7b2aeb3c8d1a4fd03c5843af07474735">fit</a>(FeatureFinderAlgorithmPickedHelperStructs::MassTraces&lt; PeakType &gt; &amp;traces)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#ae740893fa17f26ea27e6f2383d72cb40">getCenter</a>() const =0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a02f02fa9832ca3e8d47c575a39803a2a">getDefaults</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a642bbbd0de05e84147e701bfeaf188a2">getFeatureIntensityContribution</a>()=0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#aa1e7b6cd685312da3c92644d8fe71aac">getFWHM</a>() const =0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#ab67d38bd9a15db565531cc729df77924">getGnuplotFormula</a>(FeatureFinderAlgorithmPickedHelperStructs::MassTrace&lt; PeakType &gt; const &amp;trace, const char function_name, const DoubleReal baseline, const DoubleReal rt_shift)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a0eac57e7b543d5084b9cdbb940fd031c">getHeight</a>() const =0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a10ddb3b8cc795c598f76db017b9ca322">getLowerRTBound</a>() const =0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#aaee0f2845288173de9f6ad47e6ad31d5">getName</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a6ce8e085d31fd86c925b6e8805f2facd">getOptimizedParameters_</a>(gsl_multifit_fdfsolver *s)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">protected</span><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a7f6aab5a7dfbdd1c062a4352a29361f3">getParameters</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a768d4a2093627a2f34728656a9721bdf">getSubsections</a>() const </td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a0ab9bd668829f0fc9608bd56560ac1ae">getUpperRTBound</a>() const =0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#ae81a426a24a2be1e601bb7e8a946d6a6">max_iterations_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#ac9fed0a961481c6439dfc3b32422d89c">operator=</a>(const TraceFitter &amp;source)</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ae6b6d68036a573a44f6609460ba2dfb6">OpenMS::DefaultParamHandler::operator=</a>(const DefaultParamHandler &amp;rhs)</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ac435f2dd4d9f9328db83af97129a8d7e">operator==</a>(const DefaultParamHandler &amp;rhs) const </td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a69d24e3ee5021aebcec9f61015fb5313">optimize_</a>(FeatureFinderAlgorithmPickedHelperStructs::MassTraces&lt; PeakType &gt; &amp;traces, const Size num_params, double x_init[], Int(*residual)(const gsl_vector *x, void *params, gsl_vector *f), Int(*jacobian)(const gsl_vector *x, void *params, gsl_matrix *J), Int(*evaluate)(const gsl_vector *x, void *params, gsl_vector *f, gsl_matrix *J))</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">protected</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a28c73e623c63a4fe3bfceb1ae8274f39">param_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#aa392ac4217e565f35cfe6ec42edd4e19">printState_</a>(SignedSize iter, gsl_multifit_fdfsolver *s)=0</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">protected</span><span class="mlabel">pure virtual</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a77d37f2e1c12e8bd33ea0e660a89e927">setName</a>(const String &amp;name)</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#abc8067511cfc949ae942ea2b08588f81">setParameters</a>(const Param &amp;param)</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ac4b0e20bc59c7a5afe016c69067e428c">subsections_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a113c8da1eadad990ed5c5c3fbfd5c2df">TraceFitter</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#abdd45634136f9a86f16cf14743c903e0">TraceFitter</a>(const TraceFitter &amp;source)</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">inline</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a776f7572fc4f466e9527ca233471920d">updateMembers_</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">protected</span><span class="mlabel">virtual</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#aba444910e4fccb93f91bf7ab135f508a">warn_empty_defaults_</a></td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">protected</span></td></tr>
 
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  <tr class="even"><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a11e9d6dd34fe8860874aa8abe0ec121b">~DefaultParamHandler</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td><td class="entry"><span class="mlabel">virtual</span></td></tr>
 
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  <tr><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html#a73cdd08b53019fc20c8b8a0119222988">~TraceFitter</a>()</td><td class="entry"><a class="el" href="classOpenMS_1_1TraceFitter.html">TraceFitter&lt; PeakType &gt;</a></td><td class="entry"><span class="mlabel">inline</span><span class="mlabel">virtual</span></td></tr>
 
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</table></div><!-- contents -->
 
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
 
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:35 using doxygen 1.8.5</font></TD>
 
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