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  • Committer: Package Import Robot
  • Author(s): Andreas Tille
  • Date: 2013-10-18 10:40:04 UTC
  • Revision ID: package-import@ubuntu.com-20131018104004-ktm4ub0pcoybnir6
Tags: upstream-1.12.4
Import upstream version 1.12.4

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R/RangesMapping-methods.R
 
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### =========================================================================
 
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### RangesMapping methods
 
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### -------------------------------------------------------------------------
 
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###
 
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setMethod("granges",  "RangesMapping", function(x) {
 
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  GRanges(space(x), ranges(x))
 
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})
 
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setAs("RangesMapping", "GenomicRanges", function(from) {
 
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  gr <- granges(from)
 
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  mcols(gr) <- DataFrame(as.matrix(hits(from)))
 
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  gr
 
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})