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Viewing changes to src/R_init_GenomicRanges.c

  • Committer: Package Import Robot
  • Author(s): Andreas Tille
  • Date: 2013-11-26 19:52:13 UTC
  • mfrom: (1.1.1)
  • Revision ID: package-import@ubuntu.com-20131126195213-1zwbthnie0a7fdns
Tags: 1.14.3-1
http://bugs.debian.org/730574
* New upstream version
  Closes: #730574
* Build-Depends: r-bioc-xvector

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Lines of Context:
src/R_init_GenomicRanges.c
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/* cigar_utils.c */
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        CALLMETHOD_DEF(valid_cigar, 2),
 
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        CALLMETHOD_DEF(explode_cigar_ops, 2),
 
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        CALLMETHOD_DEF(explode_cigar_op_lengths, 2),
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        CALLMETHOD_DEF(split_cigar, 1),
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        CALLMETHOD_DEF(cigar_op_table, 1),
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        CALLMETHOD_DEF(cigar_to_qwidth, 2),
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        CALLMETHOD_DEF(cigar_to_width, 1),
 
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        CALLMETHOD_DEF(cigar_ranges, 9),
 
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        CALLMETHOD_DEF(cigar_width, 3),
 
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        CALLMETHOD_DEF(cigar_narrow, 3),
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        CALLMETHOD_DEF(cigar_qnarrow, 3),
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        CALLMETHOD_DEF(cigar_narrow, 3),
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        CALLMETHOD_DEF(cigar_to_IRanges, 4),
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        CALLMETHOD_DEF(cigar_to_list_of_IRanges_by_alignment, 6),
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        CALLMETHOD_DEF(cigar_to_list_of_IRanges_by_rname, 7),
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        CALLMETHOD_DEF(ref_locs_to_query_locs, 4),
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        CALLMETHOD_DEF(query_locs_to_ref_locs, 4),
 
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        CALLMETHOD_DEF(ref_locs_to_query_locs, 4),
 
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        CALLMETHOD_DEF(query_locs_to_ref_locs, 4),
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/* transcript_utils.c */
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        CALLMETHOD_DEF(transcript_widths, 2),