~corrado-maurini/dolfin/tao

shared_ptr_classes = ['AdaptiveLinearVariationalSolver', 'AdaptiveNonlinearVariationalSolver', 'ErrorControl', 'Hierarchical<dolfin::ErrorControl>', 'GenericAdaptiveVariationalSolver', 'GoalFunctional', 'SpecialFacetFunction', 'TimeSeries', 'Variable', 'Hierarchical<dolfin::Form>', 'GenericDofMap', 'DofMap', 'Form', 'FiniteElement', 'BasisFunction', 'Hierarchical<dolfin::LinearVariationalProblem>', 'Hierarchical<dolfin::NonlinearVariationalProblem>', 'LinearVariationalProblem', 'NonlinearVariationalProblem', 'LinearVariationalSolver', 'NonlinearVariationalSolver', 'VariationalProblem', 'BoundaryCondition', 'Hierarchical<dolfin::DirichletBC>', 'DirichletBC', 'PeriodicBC', 'Hierarchical<dolfin::FunctionSpace>', 'FunctionSpace', 'SubSpace', 'GenericFunction', 'Hierarchical<dolfin::Function>', 'Function', 'Expression', 'FacetArea', 'Constant', 'MeshCoordinates', 'Hierarchical<dolfin::Mesh>', 'Mesh', 'BoundaryMesh', 'SubMesh', 'UnitTetrahedron', 'UnitCube', 'UnitInterval', 'Interval', 'UnitTriangle', 'UnitSquare', 'UnitCircle', 'Box', 'Rectangle', 'UnitSphere', 'SubDomain', 'DomainBoundary', 'LocalMeshData', 'MeshData', 'Hierarchical<dolfin::MeshFunction<dolfin::uint> >', 'MeshFunction<dolfin::uint>', 'CellFunction<dolfin::uint>', 'EdgeFunction<dolfin::uint>', 'FaceFunction<dolfin::uint>', 'FacetFunction<dolfin::uint>', 'VertexFunction<dolfin::uint>', 'Parameters', 'GlobalParameters', 'GenericTensor', 'GenericVector', 'GenericMatrix', 'GenericLinearOperator', 'LinearAlgebraObject', 'Scalar', 'Matrix', 'Vector', 'LinearOperator', 'STLMatrix', 'uBLASMatrix<boost::numeric::ublas::matrix<double> >', 'uBLASVector', 'PETScBaseMatrix', 'PETScLinearOperator', 'PETScKrylovSolver', 'PETScLUSolver', 'PETScMatrix', 'PETScObject', 'PETScPreconditioner', 'PETScVector', 'PETScUserPreconditioner', 'SLEPcEigenSolver', 'TAOLinearBoundSolver', 'EpetraKrylovSolver', 'EpetraLUSolver', 'EpetraMatrix', 'EpetraSparsityPattern', 'EpetraVector', 'TrilinosPreconditioner', 'PaStiXLUSolver', 'UmfpackLUSolver', 'CholmodCholeskySolver', 'uBLASKrylovSolver', 'uBLASLinearOperator', 'LinearSolver', 'GenericLinearSolver', 'GenericLUSolver', 'KrylovSolver', 'LUSolver', 'SingularSolver', 'GenericSparsityPattern', 'SparsityPattern', 'Table', 'Lagrange', 'NewtonSolver', 'PETScSNESSolver', 'VTKPlotter', 'GenericVTKPlottable', 'VTKPlottableMesh', 'VTKPlottableGenericFunction', 'VTKPlottableMeshFunction', 'ExpressionWrapper', 'Quadrature', 'LobattoQuadrature', 'RadauQuadrature', 'GaussQuadrature', 'GaussianQuadrature']

shared_ptr_classes = ['AdaptiveLinearVariationalSolver', 'AdaptiveNonlinearVariationalSolver', 'ErrorControl', 'Hierarchical<dolfin::ErrorControl>', 'GenericAdaptiveVariationalSolver', 'GoalFunctional', 'SpecialFacetFunction', 'TimeSeries', 'Variable', 'Hierarchical<dolfin::Form>', 'GenericDofMap', 'DofMap', 'Form', 'FiniteElement', 'BasisFunction', 'Hierarchical<dolfin::LinearVariationalProblem>', 'Hierarchical<dolfin::NonlinearVariationalProblem>', 'LinearVariationalProblem', 'NonlinearVariationalProblem', 'LinearVariationalSolver', 'NonlinearVariationalSolver', 'VariationalProblem', 'BoundaryCondition', 'Hierarchical<dolfin::DirichletBC>', 'DirichletBC', 'PeriodicBC', 'Hierarchical<dolfin::FunctionSpace>', 'FunctionSpace', 'SubSpace', 'GenericFunction', 'Hierarchical<dolfin::Function>', 'Function', 'Expression', 'FacetArea', 'Constant', 'MeshCoordinates', 'Hierarchical<dolfin::Mesh>', 'Mesh', 'BoundaryMesh', 'SubMesh', 'UnitTetrahedronMesh', 'UnitTetrahedron', 'UnitCubeMesh', 'UnitCube', 'UnitIntervalMesh', 'UnitInterval', 'IntervalMesh', 'Interval', 'UnitTriangleMesh', 'UnitTriangle', 'UnitSquareMesh', 'UnitSquare', 'UnitCircleMesh', 'UnitCircle', 'BoxMesh', 'Box', 'RectangleMesh', 'Rectangle', 'CSGGeometry', 'CSGOperator', 'CSGUnion', 'CSGDifference', 'CSGIntersection', 'CSGPrimitive', 'CSGPrimitive2D', 'CSGPrimitive3D', 'Circle', 'Ellipse', 'Polygon', 'Sphere', 'Cone', 'Cylinder', 'Tetrahedron', 'Surface3D', 'CSGCGALMeshGenerator2D', 'CSGCGALMeshGenerator3D', 'SubDomain', 'DomainBoundary', 'LocalMeshData', 'MeshData', 'Hierarchical<dolfin::MeshFunction<std::size_t> >', 'MeshFunction<std::size_t>', 'Hierarchical<dolfin::MeshFunction<dolfin::uint> >', 'MeshFunction<dolfin::uint>', 'CellFunction<std::size_t>', 'EdgeFunction<std::size_t>', 'FaceFunction<std::size_t>', 'FacetFunction<std::size_t>', 'VertexFunction<std::size_t>', 'CellFunction<dolfin::uint>', 'EdgeFunction<dolfin::uint>', 'FaceFunction<dolfin::uint>', 'FacetFunction<dolfin::uint>', 'VertexFunction<dolfin::uint>', 'Parameters', 'GlobalParameters', 'GenericLinearOperator', 'GenericMatrix', 'GenericPreconditioner', 'GenericTensor', 'GenericVector', 'LinearAlgebraObject', 'Scalar', 'Matrix', 'Vector', 'LinearOperator', 'STLMatrix', 'uBLASMatrix<boost::numeric::ublas::matrix<double> >', 'uBLASVector', 'PETScBaseMatrix', 'PETScLinearOperator', 'PETScKrylovSolver', 'PETScLUSolver', 'PETScMatrix', 'PETScObject', 'PETScPreconditioner', 'PETScVector', 'PETScUserPreconditioner', 'SLEPcEigenSolver', 'TAOLinearBoundSolver', 'EpetraKrylovSolver', 'EpetraLUSolver', 'EpetraMatrix', 'EpetraSparsityPattern', 'EpetraVector', 'TrilinosPreconditioner', 'PaStiXLUSolver', 'UmfpackLUSolver', 'CholmodCholeskySolver', 'uBLASKrylovSolver', 'uBLASLinearOperator', 'LinearSolver', 'GenericLinearSolver', 'GenericLUSolver', 'KrylovSolver', 'LUSolver', 'GenericSparsityPattern', 'SparsityPattern', 'Table', 'GenericFile', 'File', 'XDMFFile', 'HDF5File', 'Lagrange', 'NewtonSolver', 'PETScSNESSolver', 'VTKPlotter', 'GenericVTKPlottable', 'VTKPlottableMesh', 'VTKPlottableGenericFunction', 'VTKPlottableMeshFunction', 'ExpressionWrapper', 'Quadrature', 'LobattoQuadrature', 'RadauQuadrature', 'GaussQuadrature', 'GaussianQuadrature']

# An OrderedDict of all dolfin declared and its meta info

dolfin_type_def = OrderedDict([\

('ufc::function', {'header': 'ufc.h', 'submodule': '', 'derived': ['Function', 'BasisFunction', 'GenericFunction', 'SpecialFacetFunction', 'MeshCoordinates', 'Constant', 'Expression', 'FacetArea'], 'bases': [], 'module': ''}),

('uint', {'header': 'dolfin/common/types.h', 'submodule': 'common', 'derived': [], 'bases': [], 'module': 'common'}),

('DolfinIndex', {'header': 'dolfin/common/types.h', 'submodule': 'common', 'derived': [], 'bases': [], 'module': 'common'}),

('complex', {'header': 'dolfin/common/types.h', 'submodule': 'common', 'derived': [], 'bases': [], 'module': 'common'}),

('Array', {'header': 'dolfin/common/Array.h', 'submodule': 'common', 'derived': [], 'bases': [], 'module': 'common'}),

('IndexSet', {'header': 'dolfin/common/IndexSet.h', 'submodule': 'common', 'derived': [], 'bases': [], 'module': 'common'}),

('Set', {'header': 'dolfin/common/Set.h', 'submodule': 'common', 'derived': [], 'bases': [], 'module': 'common'}),

('Timer', {'header': 'dolfin/common/Timer.h', 'submodule': 'common', 'derived': [], 'bases': [], 'module': 'common'}),

('Variable', {'header': 'dolfin/common/Variable.h', 'submodule': 'common', 'derived': ['GenericDofMap', 'PETScVector', 'PETScLUSolver', 'TAOLinearBoundSolver', 'EpetraVector', 'Matrix', 'UnitSphere', 'VTKPlotter', 'uBLASVector', 'uBLASMatrix', 'GenericLinearOperator', 'UnitCube', 'FacetFunction', 'GenericTensor', 'FaceFunction', 'AdaptiveNonlinearVariationalSolver', 'BoundaryCondition', 'TrilinosPreconditioner', 'XDMFFile', 'Scalar', 'LinearOperator', 'EpetraKrylovSolver', 'MeshFunction', 'SubMesh', 'LinearAlgebraObject', 'UnitInterval', 'GenericSparsityPattern', 'UnitCircle', 'BoundaryMesh', 'AdaptiveLinearVariationalSolver', 'CholmodCholeskySolver', 'CellFunction', 'LUSolver', 'SparsityPattern', 'Box', 'LinearSolver', 'PETScLinearOperator', 'MeshCoordinates', 'Vector', 'MeshValueCollection', 'KrylovSolver', 'GenericLUSolver', 'PETScPreconditioner', 'SingularSolver', 'UnitSquare', 'GenericVector', 'VertexFunction', 'Rectangle', 'LocalMeshData', 'PeriodicBC', 'GenericMatrix', 'Mesh', 'MUMPSLUSolver', 'Interval', 'EpetraLUSolver', 'SpecialFacetFunction', 'Constant', 'Expression', 'UnitTetrahedron', 'Lagrange', 'PETScMatrix', 'DofMap', 'GenericLinearSolver', 'SLEPcEigenSolver', 'uBLASKrylovSolver', 'SubSpace', 'GenericAdaptiveVariationalSolver', 'ErrorControl', 'EpetraMatrix', 'EdgeFunction', 'Function', 'DirichletBC', 'STLMatrix', 'PETScBaseMatrix', 'LinearVariationalSolver', 'UmfpackLUSolver', 'PETScKrylovSolver', 'HDF5File', 'TimeSeries', 'PaStiXLUSolver', 'FacetArea', 'GenericFunction', 'UnitTriangle', 'uBLASLinearOperator', 'NewtonSolver', 'FunctionSpace', 'Table', 'NonlinearVariationalSolver', 'MeshData'], 'bases': [], 'module': 'common'}),

('Hierarchical', {'header': 'dolfin/common/Hierarchical.h', 'submodule': 'common', 'derived': ['UnitInterval', 'UnitCircle', 'BoundaryMesh', 'SubSpace', 'LinearVariationalProblem', 'GoalFunctional', 'ErrorControl', 'VertexFunction', 'DirichletBC', 'Rectangle', 'UnitSquare', 'Function', 'UnitSphere', 'Form', 'CellFunction', 'UnitCube', 'Mesh', 'EdgeFunction', 'SubMesh', 'MeshFunction', 'Box', 'FaceFunction', 'FacetFunction', 'Interval', 'NonlinearVariationalProblem', 'UnitTriangle', 'UnitTetrahedron', 'FunctionSpace'], 'bases': [], 'module': 'common'}),

('Variable', {'header': 'dolfin/common/Variable.h', 'submodule': 'common', 'derived': ['GenericDofMap', 'PETScVector', 'PETScLUSolver', 'CSGDifference', 'UnitCircleMesh', 'EpetraVector', 'Matrix', 'VTKPlotter', 'uBLASVector', 'UnitIntervalMesh', 'uBLASMatrix', 'GenericLinearOperator', 'UnitCube', 'MeshCoordinates', 'CSGCGALMeshGenerator3D', 'CSGPrimitive3D', 'FacetFunction', 'GenericTensor', 'FaceFunction', 'AdaptiveNonlinearVariationalSolver', 'BoundaryCondition', 'UnitSquareMesh', 'CSGPrimitive', 'UmfpackLUSolver', 'TrilinosPreconditioner', 'CSGPrimitive2D', 'XDMFFile', 'Scalar', 'SparsityPattern', 'Lagrange', 'CSGCGALMeshGenerator2D', 'LinearVariationalSolver', 'LinearAlgebraObject', 'UnitInterval', 'GenericSparsityPattern', 'UnitCircle', 'BoundaryMesh', 'AdaptiveLinearVariationalSolver', 'Circle', 'CSGIntersection', 'CSGOperator', 'CSGGeometry', 'CholmodCholeskySolver', 'CellFunction', 'LUSolver', 'BoxMesh', 'SubMesh', 'LinearOperator', 'Box', 'LinearSolver', 'PETScLinearOperator', 'UnitTetrahedronMesh', 'EpetraKrylovSolver', 'Vector', 'MeshValueCollection', 'KrylovSolver', 'GenericLUSolver', 'Cylinder', 'PETScPreconditioner', 'Cone', 'UnitSquare', 'GenericVector', 'VertexFunction', 'Rectangle', 'LocalMeshData', 'PeriodicBC', 'GenericMatrix', 'Mesh', 'IntervalMesh', 'MUMPSLUSolver', 'Tetrahedron', 'EpetraLUSolver', 'SpecialFacetFunction', 'Constant', 'Expression', 'RectangleMesh', 'PETScMatrix', 'DofMap', 'GenericLinearSolver', 'SLEPcEigenSolver', 'Surface3D', 'uBLASKrylovSolver', 'Polygon', 'UnitCubeMesh', 'SubSpace', 'GenericAdaptiveVariationalSolver', 'ErrorControl', 'EpetraMatrix', 'EdgeFunction', 'Function', 'DirichletBC', 'UnitTriangleMesh', 'STLMatrix', 'PETScBaseMatrix', 'MeshFunction', 'TAOLinearBoundSolver', 'PETScKrylovSolver', 'HDF5File', 'TimeSeries', 'PaStiXLUSolver', 'FacetArea', 'GenericFunction', 'CSGUnion', 'uBLASLinearOperator', 'NewtonSolver', 'NonlinearVariationalSolver', 'Sphere', 'FunctionSpace', 'Table', 'Ellipse', 'MeshData'], 'bases': [], 'module': 'common'}),

('Hierarchical', {'header': 'dolfin/common/Hierarchical.h', 'submodule': 'common', 'derived': ['UnitSquare', 'UnitCubeMesh', 'UnitCircle', 'BoundaryMesh', 'SubSpace', 'LinearVariationalProblem', 'GoalFunctional', 'ErrorControl', 'VertexFunction', 'UnitCircleMesh', 'DirichletBC', 'UnitInterval', 'Function', 'Form', 'UnitIntervalMesh', 'UnitTriangleMesh', 'CellFunction', 'UnitCube', 'Mesh', 'BoxMesh', 'EdgeFunction', 'IntervalMesh', 'SubMesh', 'MeshFunction', 'FacetFunction', 'UnitTetrahedronMesh', 'FaceFunction', 'UnitSquareMesh', 'NonlinearVariationalProblem', 'RectangleMesh', 'FunctionSpace'], 'bases': [], 'module': 'common'}),

('map_iterator', {'header': 'dolfin/common/MPI.h', 'submodule': 'common', 'derived': [], 'bases': [], 'module': 'common'}),

('map_const_iterator', {'header': 'dolfin/common/MPI.h', 'submodule': 'common', 'derived': [], 'bases': [], 'module': 'common'}),

('MPI', {'header': 'dolfin/common/MPI.h', 'submodule': 'common', 'derived': [], 'bases': [], 'module': 'common'}),

('GenericVector', {'header': 'dolfin/la/GenericVector.h', 'submodule': 'la', 'derived': ['uBLASVector', 'Vector', 'EpetraVector', 'PETScVector'], 'bases': ['Variable', 'GenericTensor', 'LinearAlgebraObject'], 'module': 'la'}),

('GenericLinearSolver', {'header': 'dolfin/la/GenericLinearSolver.h', 'submodule': 'la', 'derived': ['GenericLUSolver', 'LinearSolver', 'UmfpackLUSolver', 'CholmodCholeskySolver', 'EpetraLUSolver', 'PETScKrylovSolver', 'PETScLUSolver', 'LUSolver', 'EpetraKrylovSolver', 'uBLASKrylovSolver', 'KrylovSolver'], 'bases': ['Variable'], 'module': 'la'}),

('GenericLUSolver', {'header': 'dolfin/la/GenericLUSolver.h', 'submodule': 'la', 'derived': ['PETScLUSolver', 'UmfpackLUSolver', 'LUSolver', 'EpetraLUSolver'], 'bases': ['Variable', 'GenericLinearSolver'], 'module': 'la'}),

('PETScObject', {'header': 'dolfin/la/PETScObject.h', 'submodule': 'la', 'derived': ['PETScUserPreconditioner', 'PETScLinearOperator', 'PETScPreconditioner', 'PETScMatrix', 'PETScKrylovSolver', 'PETScVector', 'PETScLUSolver', 'TAOLinearBoundSolver', 'PETScBaseMatrix', 'SLEPcEigenSolver'], 'bases': [], 'module': 'la'}),

('GenericPreconditioner', {'header': 'dolfin/la/GenericPreconditioner.h', 'submodule': 'la', 'derived': ['PETScPreconditioner', 'TrilinosPreconditioner'], 'bases': [], 'module': 'la'}),

('PETScObject', {'header': 'dolfin/la/PETScObject.h', 'submodule': 'la', 'derived': ['PETScUserPreconditioner', 'PETScLinearOperator', 'PETScPreconditioner', 'PETScMatrix', 'PETScKrylovSolver', 'PETScVector', 'PETScLUSolver', 'PETScSNESSolver', 'TAOLinearBoundSolver', 'PETScBaseMatrix', 'SLEPcEigenSolver'], 'bases': [], 'module': 'la'}),

('PETScBaseMatrix', {'header': 'dolfin/la/PETScBaseMatrix.h', 'submodule': 'la', 'derived': ['PETScMatrix', 'PETScLinearOperator'], 'bases': ['Variable', 'PETScObject'], 'module': 'la'}),

('PETScMatrixDeleter', {'header': 'dolfin/la/PETScBaseMatrix.h', 'submodule': 'la', 'derived': [], 'bases': [], 'module': 'la'}),

('uBLASFactory', {'header': 'dolfin/la/uBLASFactory.h', 'submodule': 'la', 'derived': [], 'bases': ['GenericLinearAlgebraFactory'], 'module': 'la'}),

('uBLASLinearOperator', {'header': 'dolfin/la/uBLASLinearOperator.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'LinearAlgebraObject', 'GenericLinearOperator'], 'module': 'la'}),

('PETScMatrix', {'header': 'dolfin/la/PETScMatrix.h', 'submodule': 'la', 'derived': [], 'bases': ['LinearAlgebraObject', 'GenericTensor', 'GenericLinearOperator', 'PETScObject', 'GenericMatrix', 'Variable', 'PETScBaseMatrix'], 'module': 'la'}),

('PETScLinearOperator', {'header': 'dolfin/la/PETScLinearOperator.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'PETScBaseMatrix', 'LinearAlgebraObject', 'GenericLinearOperator', 'PETScObject'], 'module': 'la'}),

('PETScPreconditioner', {'header': 'dolfin/la/PETScPreconditioner.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'PETScObject'], 'module': 'la'}),

('PETScPreconditioner', {'header': 'dolfin/la/PETScPreconditioner.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'GenericPreconditioner', 'PETScObject'], 'module': 'la'}),

('EpetraLUSolver', {'header': 'dolfin/la/EpetraLUSolver.h', 'submodule': 'la', 'derived': [], 'bases': ['GenericLUSolver', 'Variable', 'GenericLinearSolver'], 'module': 'la'}),

('EpetraKrylovSolver', {'header': 'dolfin/la/EpetraKrylovSolver.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'GenericLinearSolver'], 'module': 'la'}),

('EpetraMatrix', {'header': 'dolfin/la/EpetraMatrix.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'GenericMatrix', 'LinearAlgebraObject', 'GenericLinearOperator', 'GenericTensor'], 'module': 'la'}),

('STLFactory', {'header': 'dolfin/la/STLFactory.h', 'submodule': 'la', 'derived': [], 'bases': ['GenericLinearAlgebraFactory'], 'module': 'la'}),

100

('SLEPcEigenSolver', {'header': 'dolfin/la/SLEPcEigenSolver.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'PETScObject'], 'module': 'la'}),

100

101

('TAOLinearBoundSolver', {'header': 'dolfin/la/TAOLinearBoundSolver.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'PETScObject'], 'module': 'la'}),

101

('TrilinosPreconditioner', {'header': 'dolfin/la/TrilinosPreconditioner.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable'], 'module': 'la'}),

102

('TrilinosPreconditioner', {'header': 'dolfin/la/TrilinosPreconditioner.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'GenericPreconditioner'], 'module': 'la'}),

102

103

('uBLASSparseMatrix', {'header': 'dolfin/la/uBLASSparseMatrix.h', 'submodule': 'la', 'derived': [], 'bases': [], 'module': 'la'}),

103

104

('uBLASDenseMatrix', {'header': 'dolfin/la/uBLASDenseMatrix.h', 'submodule': 'la', 'derived': [], 'bases': [], 'module': 'la'}),

104

105

('uBLASPreconditioner', {'header': 'dolfin/la/uBLASPreconditioner.h', 'submodule': 'la', 'derived': ['uBLASILUPreconditioner'], 'bases': [], 'module': 'la'}),

110

111

('LinearSolver', {'header': 'dolfin/la/LinearSolver.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'GenericLinearSolver'], 'module': 'la'}),

111

112

('KrylovSolver', {'header': 'dolfin/la/KrylovSolver.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'GenericLinearSolver'], 'module': 'la'}),

112

113

('LUSolver', {'header': 'dolfin/la/LUSolver.h', 'submodule': 'la', 'derived': [], 'bases': ['GenericLUSolver', 'Variable', 'GenericLinearSolver'], 'module': 'la'}),

113

('SingularSolver', {'header': 'dolfin/la/SingularSolver.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable'], 'module': 'la'}),

114

('BlockVector', {'header': 'dolfin/la/BlockVector.h', 'submodule': 'la', 'derived': [], 'bases': [], 'module': 'la'}),

115

('BlockMatrix', {'header': 'dolfin/la/BlockMatrix.h', 'submodule': 'la', 'derived': [], 'bases': [], 'module': 'la'}),

116

('TensorProductVector', {'header': 'dolfin/la/TensorProductVector.h', 'submodule': 'la', 'derived': [], 'bases': [], 'module': 'la'}),

118

('LinearOperator', {'header': 'dolfin/la/LinearOperator.h', 'submodule': 'la', 'derived': [], 'bases': ['Variable', 'LinearAlgebraObject', 'GenericLinearOperator'], 'module': 'la'}),

119

('NonlinearProblem', {'header': 'dolfin/nls/NonlinearProblem.h', 'submodule': 'nls', 'derived': [], 'bases': [], 'module': 'la'}),

120

('NewtonSolver', {'header': 'dolfin/nls/NewtonSolver.h', 'submodule': 'nls', 'derived': [], 'bases': ['Variable'], 'module': 'la'}),

121

('PETScSNESSolver', {'header': 'dolfin/nls/PETScSNESSolver.h', 'submodule': 'nls', 'derived': [], 'bases': [], 'module': 'la'}),

121

('PETScSNESSolver', {'header': 'dolfin/nls/PETScSNESSolver.h', 'submodule': 'nls', 'derived': [], 'bases': ['PETScObject'], 'module': 'la'}),

122

('IntersectionOperator', {'header': 'dolfin/intersection/IntersectionOperator.h', 'submodule': 'intersection', 'derived': [], 'bases': [], 'module': 'mesh'}),

123

('PrimitiveIntersector', {'header': 'dolfin/intersection/PrimitiveIntersector.h', 'submodule': 'intersection', 'derived': [], 'bases': [], 'module': 'mesh'}),

124

('PointPrimitive', {'header': 'dolfin/intersection/PrimitiveTraits.h', 'submodule': 'intersection', 'derived': [], 'bases': [], 'module': 'mesh'}),

133

('MeshGeometry', {'header': 'dolfin/mesh/MeshGeometry.h', 'submodule': 'mesh', 'derived': [], 'bases': [], 'module': 'mesh'}),

134

('MeshDomains', {'header': 'dolfin/mesh/MeshDomains.h', 'submodule': 'mesh', 'derived': [], 'bases': [], 'module': 'mesh'}),

135

('MeshData', {'header': 'dolfin/mesh/MeshData.h', 'submodule': 'mesh', 'derived': [], 'bases': ['Variable'], 'module': 'mesh'}),

136

('Mesh', {'header': 'dolfin/mesh/Mesh.h', 'submodule': 'mesh', 'derived': ['Box', 'UnitSphere', 'UnitInterval', 'UnitTriangle', 'UnitCircle', 'BoundaryMesh', 'Interval', 'UnitCube', 'SubMesh', 'UnitTetrahedron', 'Rectangle', 'UnitSquare'], 'bases': ['Variable', 'Hierarchical'], 'module': 'mesh'}),

136

('Mesh', {'header': 'dolfin/mesh/Mesh.h', 'submodule': 'mesh', 'derived': ['UnitSquare', 'UnitCubeMesh', 'UnitCircle', 'BoundaryMesh', 'UnitTetrahedronMesh', 'UnitTriangleMesh', 'UnitInterval', 'UnitCube', 'UnitSquareMesh', 'BoxMesh', 'UnitCircleMesh', 'IntervalMesh', 'UnitIntervalMesh', 'SubMesh', 'RectangleMesh'], 'bases': ['Variable', 'Hierarchical'], 'module': 'mesh'}),

137

('MeshEntity', {'header': 'dolfin/mesh/MeshEntity.h', 'submodule': 'mesh', 'derived': ['Cell', 'Vertex', 'Face', 'Facet', 'Edge', 'FacetCell'], 'bases': [], 'module': 'mesh'}),

138

('MeshEntityIterator', {'header': 'dolfin/mesh/MeshEntityIterator.h', 'submodule': 'mesh', 'derived': [], 'bases': [], 'module': 'mesh'}),

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('MeshEntityIteratorBase', {'header': 'dolfin/mesh/MeshEntityIteratorBase.h', 'submodule': 'mesh', 'derived': [], 'bases': [], 'module': 'mesh'}),

168

('LocalMeshData', {'header': 'dolfin/mesh/LocalMeshData.h', 'submodule': 'mesh', 'derived': [], 'bases': ['Variable'], 'module': 'mesh'}),

169

('SubDomain', {'header': 'dolfin/mesh/SubDomain.h', 'submodule': 'mesh', 'derived': ['DomainBoundary'], 'bases': [], 'module': 'mesh'}),

170

('SubMesh', {'header': 'dolfin/mesh/SubMesh.h', 'submodule': 'mesh', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

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('Restriction', {'header': 'dolfin/mesh/Restriction.h', 'submodule': 'mesh', 'derived': [], 'bases': [], 'module': 'mesh'}),

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172

('DomainBoundary', {'header': 'dolfin/mesh/DomainBoundary.h', 'submodule': 'mesh', 'derived': [], 'bases': ['SubDomain'], 'module': 'mesh'}),

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173

('BoundaryMesh', {'header': 'dolfin/mesh/BoundaryMesh.h', 'submodule': 'mesh', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

173

('Interval', {'header': 'dolfin/generation/Interval.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

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('PolygonalMeshGenerator', {'header': 'dolfin/generation/PolygonalMeshGenerator.h', 'submodule': 'generation', 'derived': [], 'bases': [], 'module': 'mesh'}),

175

('PolyhedralMeshGenerator', {'header': 'dolfin/generation/PolyhedralMeshGenerator.h', 'submodule': 'generation', 'derived': [], 'bases': [], 'module': 'mesh'}),

176

('Triangulate', {'header': 'dolfin/generation/Triangulate.h', 'submodule': 'generation', 'derived': [], 'bases': [], 'module': 'mesh'}),

177

('UnitTetrahedron', {'header': 'dolfin/generation/UnitTetrahedron.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

178

('UnitCube', {'header': 'dolfin/generation/UnitCube.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

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('UnitInterval', {'header': 'dolfin/generation/UnitInterval.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

180

('UnitTriangle', {'header': 'dolfin/generation/UnitTriangle.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

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('UnitSquare', {'header': 'dolfin/generation/UnitSquare.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

182

('UnitCircle', {'header': 'dolfin/generation/UnitCircle.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

183

('Box', {'header': 'dolfin/generation/Box.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

184

('Rectangle', {'header': 'dolfin/generation/Rectangle.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

185

('UnitSphere', {'header': 'dolfin/generation/UnitSphere.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

177

('BoxMesh', {'header': 'dolfin/generation/BoxMesh.h', 'submodule': 'generation', 'derived': ['UnitCube', 'UnitCubeMesh'], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

178

('RectangleMesh', {'header': 'dolfin/generation/RectangleMesh.h', 'submodule': 'generation', 'derived': ['UnitSquareMesh', 'UnitSquare'], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

179

('UnitTetrahedronMesh', {'header': 'dolfin/generation/UnitTetrahedronMesh.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

180

('UnitCubeMesh', {'header': 'dolfin/generation/UnitCubeMesh.h', 'submodule': 'generation', 'derived': ['UnitCube'], 'bases': ['Variable', 'Mesh', 'Hierarchical', 'BoxMesh'], 'module': 'mesh'}),

181

('UnitCube', {'header': 'dolfin/generation/UnitCube.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical', 'UnitCubeMesh', 'BoxMesh'], 'module': 'mesh'}),

182

('UnitIntervalMesh', {'header': 'dolfin/generation/UnitIntervalMesh.h', 'submodule': 'generation', 'derived': ['UnitInterval'], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

183

('UnitInterval', {'header': 'dolfin/generation/UnitInterval.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'UnitIntervalMesh', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

184

('UnitTriangleMesh', {'header': 'dolfin/generation/UnitTriangleMesh.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

185

('UnitSquareMesh', {'header': 'dolfin/generation/UnitSquareMesh.h', 'submodule': 'generation', 'derived': ['UnitSquare'], 'bases': ['Variable', 'RectangleMesh', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

186

('UnitSquare', {'header': 'dolfin/generation/UnitSquare.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'RectangleMesh', 'UnitSquareMesh', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

187

('UnitCircleMesh', {'header': 'dolfin/generation/UnitCircleMesh.h', 'submodule': 'generation', 'derived': ['UnitCircle'], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

188

('UnitCircle', {'header': 'dolfin/generation/UnitCircle.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'UnitCircleMesh', 'Hierarchical'], 'module': 'mesh'}),

189

('IntervalMesh', {'header': 'dolfin/generation/IntervalMesh.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'Mesh', 'Hierarchical'], 'module': 'mesh'}),

190

('CSGGeometry', {'header': 'dolfin/generation/CSGGeometry.h', 'submodule': 'generation', 'derived': ['Box', 'CSGOperator', 'CSGPrimitive2D', 'Polygon', 'CSGUnion', 'Sphere', 'Tetrahedron', 'Cylinder', 'Ellipse', 'CSGDifference', 'CSGPrimitive', 'Surface3D', 'Circle', 'CSGPrimitive3D', 'CSGIntersection', 'Rectangle', 'Cone'], 'bases': ['Variable'], 'module': 'mesh'}),

191

('CSGMeshGenerator', {'header': 'dolfin/generation/CSGMeshGenerator.h', 'submodule': 'generation', 'derived': [], 'bases': [], 'module': 'mesh'}),

192

('CSGCGALMeshGenerator2D', {'header': 'dolfin/generation/CSGCGALMeshGenerator2D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable'], 'module': 'mesh'}),

193

('CSGCGALMeshGenerator3D', {'header': 'dolfin/generation/CSGCGALMeshGenerator3D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable'], 'module': 'mesh'}),

194

('CSGDifference', {'header': 'dolfin/generation/CSGOperators.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGOperator', 'CSGGeometry'], 'module': 'mesh'}),

195

('CSGOperator', {'header': 'dolfin/generation/CSGOperators.h', 'submodule': 'generation', 'derived': ['CSGDifference', 'CSGIntersection', 'CSGUnion'], 'bases': ['Variable', 'CSGGeometry'], 'module': 'mesh'}),

196

('CSGIntersection', {'header': 'dolfin/generation/CSGOperators.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGOperator', 'CSGGeometry'], 'module': 'mesh'}),

197

('CSGUnion', {'header': 'dolfin/generation/CSGOperators.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGOperator', 'CSGGeometry'], 'module': 'mesh'}),

198

('CSGPrimitive', {'header': 'dolfin/generation/CSGPrimitive.h', 'submodule': 'generation', 'derived': ['Box', 'Cylinder', 'CSGPrimitive2D', 'Polygon', 'Tetrahedron', 'Sphere', 'Surface3D', 'Circle', 'CSGPrimitive3D', 'Ellipse', 'Rectangle', 'Cone'], 'bases': ['Variable', 'CSGGeometry'], 'module': 'mesh'}),

199

('Circle', {'header': 'dolfin/generation/CSGPrimitives2D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGPrimitive', 'CSGGeometry', 'CSGPrimitive2D'], 'module': 'mesh'}),

200

('CSGPrimitive2D', {'header': 'dolfin/generation/CSGPrimitives2D.h', 'submodule': 'generation', 'derived': ['Circle', 'Ellipse', 'Rectangle', 'Polygon'], 'bases': ['Variable', 'CSGGeometry', 'CSGPrimitive'], 'module': 'mesh'}),

201

('Ellipse', {'header': 'dolfin/generation/CSGPrimitives2D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGPrimitive', 'CSGGeometry', 'CSGPrimitive2D'], 'module': 'mesh'}),

202

('Rectangle', {'header': 'dolfin/generation/CSGPrimitives2D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGPrimitive', 'CSGGeometry', 'CSGPrimitive2D'], 'module': 'mesh'}),

203

('Polygon', {'header': 'dolfin/generation/CSGPrimitives2D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGPrimitive', 'CSGGeometry', 'CSGPrimitive2D'], 'module': 'mesh'}),

204

('Box', {'header': 'dolfin/generation/CSGPrimitives3D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGGeometry', 'CSGPrimitive3D', 'CSGPrimitive'], 'module': 'mesh'}),

205

('Cylinder', {'header': 'dolfin/generation/CSGPrimitives3D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGGeometry', 'CSGPrimitive3D', 'CSGPrimitive', 'Cone'], 'module': 'mesh'}),

206

('Tetrahedron', {'header': 'dolfin/generation/CSGPrimitives3D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGGeometry', 'CSGPrimitive3D', 'CSGPrimitive'], 'module': 'mesh'}),

207

('Sphere', {'header': 'dolfin/generation/CSGPrimitives3D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGGeometry', 'CSGPrimitive3D', 'CSGPrimitive'], 'module': 'mesh'}),

208

('Cone', {'header': 'dolfin/generation/CSGPrimitives3D.h', 'submodule': 'generation', 'derived': ['Cylinder'], 'bases': ['Variable', 'CSGGeometry', 'CSGPrimitive3D', 'CSGPrimitive'], 'module': 'mesh'}),

209

('CSGPrimitive3D', {'header': 'dolfin/generation/CSGPrimitives3D.h', 'submodule': 'generation', 'derived': ['Box', 'Cylinder', 'Tetrahedron', 'Sphere', 'Surface3D', 'Cone'], 'bases': ['Variable', 'CSGGeometry', 'CSGPrimitive'], 'module': 'mesh'}),

210

('Surface3D', {'header': 'dolfin/generation/CSGPrimitives3D.h', 'submodule': 'generation', 'derived': [], 'bases': ['Variable', 'CSGGeometry', 'CSGPrimitive3D', 'CSGPrimitive'], 'module': 'mesh'}),

211

('CSGGeometries', {'header': 'dolfin/generation/CSGGeometries3D.h', 'submodule': 'generation', 'derived': [], 'bases': [], 'module': 'mesh'}),

186

212

('BoostUndirectedGraph', {'header': 'dolfin/graph/Graph.h', 'submodule': 'graph', 'derived': [], 'bases': [], 'module': 'mesh'}),

187

213

('BoostBidirectionalGraph', {'header': 'dolfin/graph/Graph.h', 'submodule': 'graph', 'derived': [], 'bases': [], 'module': 'mesh'}),

188

214

('graph_set_type', {'header': 'dolfin/graph/Graph.h', 'submodule': 'graph', 'derived': [], 'bases': [], 'module': 'mesh'}),

236

262

('LocalAssembler', {'header': 'dolfin/adaptivity/LocalAssembler.h', 'submodule': 'adaptivity', 'derived': [], 'bases': [], 'module': 'fem'}),

237

263

('TimeSeries', {'header': 'dolfin/adaptivity/TimeSeries.h', 'submodule': 'adaptivity', 'derived': [], 'bases': ['Variable'], 'module': 'fem'}),

238

264

('VTKPlotter', {'header': 'dolfin/plot/VTKPlotter.h', 'submodule': 'plot', 'derived': [], 'bases': ['Variable'], 'module': 'io'}),

265

('GenericFile', {'header': 'dolfin/io/GenericFile.h', 'submodule': 'io', 'derived': ['XDMFFile'], 'bases': [], 'module': 'io'}),

239

266

('File', {'header': 'dolfin/io/File.h', 'submodule': 'io', 'derived': [], 'bases': [], 'module': 'io'}),

240

('XDMFFile', {'header': 'dolfin/io/XDMFFile.h', 'submodule': 'io', 'derived': [], 'bases': ['Variable'], 'module': 'io'}),

267

('XDMFFile', {'header': 'dolfin/io/XDMFFile.h', 'submodule': 'io', 'derived': [], 'bases': ['Variable', 'GenericFile'], 'module': 'io'}),

241

268

('HDF5File', {'header': 'dolfin/io/HDF5File.h', 'submodule': 'io', 'derived': [], 'bases': ['Variable'], 'module': 'io'}),])

242

269

243

270

# A map between modules and its submodules

254

281

('common', {'headers': ['dolfin/common/init.h', 'dolfin/common/defines.h', 'dolfin/common/types.h', 'dolfin/common/constants.h', 'dolfin/common/timing.h', 'dolfin/common/Array.h', 'dolfin/common/IndexSet.h', 'dolfin/common/Set.h', 'dolfin/common/Timer.h', 'dolfin/common/Variable.h', 'dolfin/common/Hierarchical.h', 'dolfin/common/MPI.h', 'dolfin/common/SubSystemsManager.h'], 'has_post': True, 'module': 'common', 'has_pre': True}),

255

282

('parameter', {'headers': ['dolfin/parameter/Parameter.h', 'dolfin/parameter/Parameters.h', 'dolfin/parameter/GlobalParameters.h'], 'has_post': True, 'module': 'common', 'has_pre': True}),

256

283

('log', {'headers': ['dolfin/log/log.h', 'dolfin/log/Event.h', 'dolfin/log/Progress.h', 'dolfin/log/Table.h', 'dolfin/log/LogLevel.h'], 'has_post': True, 'module': 'common', 'has_pre': True}),

257

('la', {'headers': ['dolfin/la/ublas.h', 'dolfin/la/LinearAlgebraObject.h', 'dolfin/la/GenericLinearOperator.h', 'dolfin/la/GenericTensor.h', 'dolfin/la/GenericMatrix.h', 'dolfin/la/GenericSparsityPattern.h', 'dolfin/la/GenericVector.h', 'dolfin/la/GenericLinearSolver.h', 'dolfin/la/GenericLUSolver.h', 'dolfin/la/PETScObject.h', 'dolfin/la/PETScBaseMatrix.h', 'dolfin/la/uBLASFactory.h', 'dolfin/la/uBLASMatrix.h', 'dolfin/la/uBLASLinearOperator.h', 'dolfin/la/PETScMatrix.h', 'dolfin/la/PETScLinearOperator.h', 'dolfin/la/PETScPreconditioner.h', 'dolfin/la/EpetraLUSolver.h', 'dolfin/la/EpetraKrylovSolver.h', 'dolfin/la/EpetraMatrix.h', 'dolfin/la/EpetraVector.h', 'dolfin/la/PETScKrylovSolver.h', 'dolfin/la/PETScLUSolver.h', 'dolfin/la/CholmodCholeskySolver.h', 'dolfin/la/UmfpackLUSolver.h', 'dolfin/la/MUMPSLUSolver.h', 'dolfin/la/PaStiXLUSolver.h', 'dolfin/la/STLMatrix.h', 'dolfin/la/CoordinateMatrix.h', 'dolfin/la/uBLASVector.h', 'dolfin/la/PETScVector.h', 'dolfin/la/SparsityPattern.h', 'dolfin/la/GenericLinearAlgebraFactory.h', 'dolfin/la/DefaultFactory.h', 'dolfin/la/PETScUserPreconditioner.h', 'dolfin/la/PETScFactory.h', 'dolfin/la/PETScCuspFactory.h', 'dolfin/la/EpetraFactory.h', 'dolfin/la/STLFactory.h', 'dolfin/la/SLEPcEigenSolver.h', 'dolfin/la/TAOLinearBoundSolver.h', 'dolfin/la/TrilinosPreconditioner.h', 'dolfin/la/uBLASSparseMatrix.h', 'dolfin/la/uBLASDenseMatrix.h', 'dolfin/la/uBLASPreconditioner.h', 'dolfin/la/uBLASKrylovSolver.h', 'dolfin/la/uBLASILUPreconditioner.h', 'dolfin/la/Vector.h', 'dolfin/la/Matrix.h', 'dolfin/la/Scalar.h', 'dolfin/la/LinearSolver.h', 'dolfin/la/KrylovSolver.h', 'dolfin/la/LUSolver.h', 'dolfin/la/SingularSolver.h', 'dolfin/la/solve.h', 'dolfin/la/BlockVector.h', 'dolfin/la/BlockMatrix.h', 'dolfin/la/TensorProductVector.h', 'dolfin/la/TensorProductMatrix.h', 'dolfin/la/LinearOperator.h'], 'has_post': True, 'module': 'la', 'has_pre': True}),

284

('la', {'headers': ['dolfin/la/ublas.h', 'dolfin/la/LinearAlgebraObject.h', 'dolfin/la/GenericLinearOperator.h', 'dolfin/la/GenericTensor.h', 'dolfin/la/GenericMatrix.h', 'dolfin/la/GenericSparsityPattern.h', 'dolfin/la/GenericVector.h', 'dolfin/la/GenericLinearSolver.h', 'dolfin/la/GenericLUSolver.h', 'dolfin/la/GenericPreconditioner.h', 'dolfin/la/PETScObject.h', 'dolfin/la/PETScBaseMatrix.h', 'dolfin/la/uBLASFactory.h', 'dolfin/la/uBLASMatrix.h', 'dolfin/la/uBLASLinearOperator.h', 'dolfin/la/PETScMatrix.h', 'dolfin/la/PETScLinearOperator.h', 'dolfin/la/PETScPreconditioner.h', 'dolfin/la/EpetraLUSolver.h', 'dolfin/la/EpetraKrylovSolver.h', 'dolfin/la/EpetraMatrix.h', 'dolfin/la/EpetraVector.h', 'dolfin/la/PETScKrylovSolver.h', 'dolfin/la/PETScLUSolver.h', 'dolfin/la/CholmodCholeskySolver.h', 'dolfin/la/UmfpackLUSolver.h', 'dolfin/la/MUMPSLUSolver.h', 'dolfin/la/PaStiXLUSolver.h', 'dolfin/la/STLMatrix.h', 'dolfin/la/CoordinateMatrix.h', 'dolfin/la/uBLASVector.h', 'dolfin/la/PETScVector.h', 'dolfin/la/SparsityPattern.h', 'dolfin/la/GenericLinearAlgebraFactory.h', 'dolfin/la/DefaultFactory.h', 'dolfin/la/PETScUserPreconditioner.h', 'dolfin/la/PETScFactory.h', 'dolfin/la/PETScCuspFactory.h', 'dolfin/la/EpetraFactory.h', 'dolfin/la/STLFactory.h', 'dolfin/la/SLEPcEigenSolver.h', 'dolfin/la/TAOLinearBoundSolver.h', 'dolfin/la/TrilinosPreconditioner.h', 'dolfin/la/uBLASSparseMatrix.h', 'dolfin/la/uBLASDenseMatrix.h', 'dolfin/la/uBLASPreconditioner.h', 'dolfin/la/uBLASKrylovSolver.h', 'dolfin/la/uBLASILUPreconditioner.h', 'dolfin/la/Vector.h', 'dolfin/la/Matrix.h', 'dolfin/la/Scalar.h', 'dolfin/la/LinearSolver.h', 'dolfin/la/KrylovSolver.h', 'dolfin/la/LUSolver.h', 'dolfin/la/solve.h', 'dolfin/la/BlockVector.h', 'dolfin/la/BlockMatrix.h', 'dolfin/la/TensorProductVector.h', 'dolfin/la/TensorProductMatrix.h', 'dolfin/la/LinearOperator.h'], 'has_post': True, 'module': 'la', 'has_pre': True}),

258

285

('nls', {'headers': ['dolfin/nls/NonlinearProblem.h', 'dolfin/nls/NewtonSolver.h', 'dolfin/nls/PETScSNESSolver.h'], 'has_post': False, 'module': 'la', 'has_pre': True}),

259

286

('intersection', {'headers': ['dolfin/intersection/IntersectionOperator.h', 'dolfin/intersection/PrimitiveIntersector.h', 'dolfin/intersection/PrimitiveTraits.h', 'dolfin/intersection/MeshPrimitive.h'], 'has_post': False, 'module': 'mesh', 'has_pre': False}),

260

('mesh', {'headers': ['dolfin/mesh/CellType.h', 'dolfin/mesh/MeshTopology.h', 'dolfin/mesh/MeshGeometry.h', 'dolfin/mesh/MeshDomains.h', 'dolfin/mesh/MeshData.h', 'dolfin/mesh/Mesh.h', 'dolfin/mesh/MeshEntity.h', 'dolfin/mesh/MeshEntityIterator.h', 'dolfin/mesh/MeshEntityIteratorBase.h', 'dolfin/mesh/SubsetIterator.h', 'dolfin/mesh/Point.h', 'dolfin/mesh/Vertex.h', 'dolfin/mesh/Edge.h', 'dolfin/mesh/Face.h', 'dolfin/mesh/Facet.h', 'dolfin/mesh/Cell.h', 'dolfin/mesh/FacetCell.h', 'dolfin/mesh/MeshConnectivity.h', 'dolfin/mesh/MeshEditor.h', 'dolfin/mesh/DynamicMeshEditor.h', 'dolfin/mesh/LocalMeshValueCollection.h', 'dolfin/mesh/MeshFunction.h', 'dolfin/mesh/MeshPartitioning.h', 'dolfin/mesh/MeshValueCollection.h', 'dolfin/mesh/MeshColoring.h', 'dolfin/mesh/MeshRenumbering.h', 'dolfin/mesh/MeshTransformation.h', 'dolfin/mesh/LocalMeshData.h', 'dolfin/mesh/SubDomain.h', 'dolfin/mesh/SubMesh.h', 'dolfin/mesh/DomainBoundary.h', 'dolfin/mesh/BoundaryMesh.h'], 'has_post': True, 'module': 'mesh', 'has_pre': True}),

261

('generation', {'headers': ['dolfin/generation/Interval.h', 'dolfin/generation/PolygonalMeshGenerator.h', 'dolfin/generation/PolyhedralMeshGenerator.h', 'dolfin/generation/Triangulate.h', 'dolfin/generation/UnitTetrahedron.h', 'dolfin/generation/UnitCube.h', 'dolfin/generation/UnitInterval.h', 'dolfin/generation/UnitTriangle.h', 'dolfin/generation/UnitSquare.h', 'dolfin/generation/UnitCircle.h', 'dolfin/generation/Box.h', 'dolfin/generation/Rectangle.h', 'dolfin/generation/UnitSphere.h'], 'has_post': False, 'module': 'mesh', 'has_pre': False}),

287

('mesh', {'headers': ['dolfin/mesh/CellType.h', 'dolfin/mesh/MeshTopology.h', 'dolfin/mesh/MeshGeometry.h', 'dolfin/mesh/MeshDomains.h', 'dolfin/mesh/MeshData.h', 'dolfin/mesh/Mesh.h', 'dolfin/mesh/MeshEntity.h', 'dolfin/mesh/MeshEntityIterator.h', 'dolfin/mesh/MeshEntityIteratorBase.h', 'dolfin/mesh/SubsetIterator.h', 'dolfin/mesh/Point.h', 'dolfin/mesh/Vertex.h', 'dolfin/mesh/Edge.h', 'dolfin/mesh/Face.h', 'dolfin/mesh/Facet.h', 'dolfin/mesh/Cell.h', 'dolfin/mesh/FacetCell.h', 'dolfin/mesh/MeshConnectivity.h', 'dolfin/mesh/MeshEditor.h', 'dolfin/mesh/DynamicMeshEditor.h', 'dolfin/mesh/LocalMeshValueCollection.h', 'dolfin/mesh/MeshFunction.h', 'dolfin/mesh/MeshPartitioning.h', 'dolfin/mesh/MeshValueCollection.h', 'dolfin/mesh/MeshColoring.h', 'dolfin/mesh/MeshRenumbering.h', 'dolfin/mesh/MeshTransformation.h', 'dolfin/mesh/LocalMeshData.h', 'dolfin/mesh/SubDomain.h', 'dolfin/mesh/SubMesh.h', 'dolfin/mesh/Restriction.h', 'dolfin/mesh/DomainBoundary.h', 'dolfin/mesh/BoundaryMesh.h'], 'has_post': True, 'module': 'mesh', 'has_pre': True}),

288

('generation', {'headers': ['dolfin/generation/PolygonalMeshGenerator.h', 'dolfin/generation/PolyhedralMeshGenerator.h', 'dolfin/generation/Triangulate.h', 'dolfin/generation/BoxMesh.h', 'dolfin/generation/RectangleMesh.h', 'dolfin/generation/UnitTetrahedronMesh.h', 'dolfin/generation/UnitCubeMesh.h', 'dolfin/generation/UnitCube.h', 'dolfin/generation/UnitIntervalMesh.h', 'dolfin/generation/UnitInterval.h', 'dolfin/generation/UnitTriangleMesh.h', 'dolfin/generation/UnitSquareMesh.h', 'dolfin/generation/UnitSquare.h', 'dolfin/generation/UnitCircleMesh.h', 'dolfin/generation/UnitCircle.h', 'dolfin/generation/IntervalMesh.h', 'dolfin/generation/Interval.h', 'dolfin/generation/CSGGeometry.h', 'dolfin/generation/CSGMeshGenerator.h', 'dolfin/generation/CSGCGALMeshGenerator2D.h', 'dolfin/generation/CSGCGALMeshGenerator3D.h', 'dolfin/generation/CSGOperators.h', 'dolfin/generation/CSGPrimitive.h', 'dolfin/generation/CSGPrimitives2D.h', 'dolfin/generation/CSGPrimitives3D.h', 'dolfin/generation/CSGGeometries3D.h'], 'has_post': True, 'module': 'mesh', 'has_pre': False}),

262

289

('refinement', {'headers': ['dolfin/refinement/refine.h'], 'has_post': False, 'module': 'mesh', 'has_pre': False}),

263

290

('function', {'headers': ['dolfin/function/GenericFunction.h', 'dolfin/function/Expression.h', 'dolfin/function/Function.h', 'dolfin/function/FunctionSpace.h', 'dolfin/function/SubSpace.h', 'dolfin/function/Constant.h', 'dolfin/function/SpecialFunctions.h', 'dolfin/function/SpecialFacetFunction.h'], 'has_post': True, 'module': 'function', 'has_pre': True}),

264

291

('graph', {'headers': ['dolfin/graph/Graph.h', 'dolfin/graph/GraphBuilder.h', 'dolfin/graph/BoostGraphOrdering.h', 'dolfin/graph/SCOTCH.h'], 'has_post': True, 'module': 'mesh', 'has_pre': False}),

267

294

('quadrature', {'headers': ['dolfin/quadrature/BarycenterQuadrature.h'], 'has_post': False, 'module': 'fem', 'has_pre': False}),

268

295

('ale', {'headers': ['dolfin/ale/ALE.h'], 'has_post': False, 'module': 'mesh', 'has_pre': False}),

269

296

('fem', {'headers': ['dolfin/fem/GenericDofMap.h', 'dolfin/fem/DofMap.h', 'dolfin/fem/Equation.h', 'dolfin/fem/FiniteElement.h', 'dolfin/fem/BasisFunction.h', 'dolfin/fem/BoundaryCondition.h', 'dolfin/fem/DirichletBC.h', 'dolfin/fem/PeriodicBC.h', 'dolfin/fem/PointSource.h', 'dolfin/fem/assemble.h', 'dolfin/fem/solve.h', 'dolfin/fem/Form.h', 'dolfin/fem/AssemblerBase.h', 'dolfin/fem/Assembler.h', 'dolfin/fem/SparsityPatternBuilder.h', 'dolfin/fem/SymmetricAssembler.h', 'dolfin/fem/SystemAssembler.h', 'dolfin/fem/LinearVariationalProblem.h', 'dolfin/fem/LinearVariationalSolver.h', 'dolfin/fem/NonlinearVariationalProblem.h', 'dolfin/fem/NonlinearVariationalSolver.h', 'dolfin/fem/OpenMpAssembler.h', 'dolfin/fem/VariationalProblem.h'], 'has_post': True, 'module': 'fem', 'has_pre': True}),

270

('adaptivity', {'headers': ['dolfin/adaptivity/GenericAdaptiveVariationalSolver.h', 'dolfin/adaptivity/AdaptiveLinearVariationalSolver.h', 'dolfin/adaptivity/AdaptiveNonlinearVariationalSolver.h', 'dolfin/adaptivity/GoalFunctional.h', 'dolfin/adaptivity/ErrorControl.h', 'dolfin/adaptivity/Extrapolation.h', 'dolfin/adaptivity/LocalAssembler.h', 'dolfin/adaptivity/TimeSeries.h', 'dolfin/adaptivity/adapt.h', 'dolfin/adaptivity/marking.h', 'dolfin/adaptivity/adaptivesolve.h'], 'has_post': False, 'module': 'fem', 'has_pre': True}),

271

('io', {'headers': ['dolfin/io/File.h', 'dolfin/io/XDMFFile.h', 'dolfin/io/HDF5File.h'], 'has_post': True, 'module': 'io', 'has_pre': False}),])

297

298

('io', {'headers': ['dolfin/io/GenericFile.h', 'dolfin/io/File.h', 'dolfin/io/XDMFFile.h', 'dolfin/io/HDF5File.h'], 'has_post': True, 'module': 'io', 'has_pre': True}),])

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