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Viewing changes to t/data/map_hem/HEM14.ups.fa_

  • Committer: Bazaar Package Importer
  • Author(s): Charles Plessy
  • Date: 2009-03-10 07:19:11 UTC
  • mfrom: (3.1.2 squeeze)
  • Revision ID: james.westby@ubuntu.com-20090310071911-ever3si2bbzx1iks
Tags: 1.6.0-2
https://launchpad.net/bugs/324001
* Removed patch system (not used):
  - removed instuctions in debian/rules;
  - removed quilt from Build-Depends in debian/control.
* Re-enabled tests:
  - uncommented test command in debian/rules;
  - uncommented previously missing build-dependencies in debian/control.
  - Re-enabled tests and uncommented build-dependencies accordingly.
* Removed libmodule-build-perl and libtest-harness-perl from
  Build-Depends-Indep (provided by perl-modules).
* Better cleaning of empty directories using find -type d -empty -delete
  instead of rmdir in debian/rules (LP: #324001).

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Lines of Context:
t/data/map_hem/HEM14.ups.fa_
 
1
>SGD_Scer_YER014W HEM14 "Protoporphyrinogen oxidase, a mitochondrial enzyme that catalyzes the seventh step in the heme biosynthetic pathway, converting protoporphyrinogen IX to protoporphyrin IX"
 
2
TATACAAGCTCTTTTTGGCGTTCTCAATTGCACTTTACTCGATATGTTTGAATTGGTGTT
 
3
CTTCGCGAATATCTCTATTGTTCTCTCTATTATACTATTTCTTTTTTTGAATACTCCGCG
 
4
ACTCCGAAGCAACAAAGTGTCGAAGGCAAGTTCAAAGGCGTTTTGTAACTAAACGAGCAA
 
5
TGGCAGCTTTCAATTAAAGAAAGGTTAGCGTTACTCTGTGATTTTTTTCATGTAAAAATT
 
6
CTCAAGAGAGATAAAGTTGTTAAAAAATTAAATATAGGTCTATAAAACTCGATAATTATA
 
7
ATGCATAAAAAGCTAACAATGT
 
8
>MIT_Spar_c425_6072 YER014W 5' untranslated region, Contig c425 34016 - 36015, 2000 bp (revcom)
 
9
TATTCGAGCCCTTTCCCGCGTTCCCAATTGTACCTTCCTCGATAGGATTGAATTGGTATC
 
10
CTTCGCGGATCTCTCTATTGTTCTCTCTATTATTCTTTTTCTTTTTTAAATACTCCGCGA
 
11
CTCCGAAGCAACAAAATGTCGAAGGCAAGATGAAAGGCGTTTTGCAACTAAACGAGTAAT
 
12
GGCAGCTTTTAATTAAATAACGGTCAGCATTACTCTATAACTTTTCACATAAAATCCTCG
 
13
AAGAAGGAAAAATTGATAATCAATTTACCGAAGAATGAATATAGGTCTATAAAAATTCAA
 
14
TAATTATAGATGCATAAAAAGC
 
15
>MIT_Smik_c283_5928 YER014W 5' untranslated region, Contig c283 42606 - 44605, 2000 bp (revcom)
 
16
TATTGAAGCTCTCTCCACTATTTCTTTAATCGCGCTATACTAGATATGGTTAAACTGCTA
 
17
TCTTTTGCAAATCCCTCTATTGTTCTTTCCATTACTCTTTTCTTTTTTAAATACGGACTC
 
18
CGAAGCAACAAGGTCGAAGGCAAGCTGAAAGGCATTTTACAACTAAACGAGCAATGGTAG
 
19
CTTTTGATTGAATAAATTATTATCATTATTTTGTTATTTGTCCCACGAAATTCTCGTTGA
 
20
AAGCAAGGTTCGTAAGGATTTATCAAATGTTAAATATAGATCTATAAAAATTGAATAGTA
 
21
ATAATAACAAGGGATGGTGTTA
 
22
>MIT_Sbay_c84_6418 YER014W 5' untranslated region, Contig c84 10802 - 12801(revcom), 2000 bp (revcom)
 
23
TGTCGAAGTTCTCCTTTATTCCGCTGTTTCTTACGGAATCCAGCGAGACTGTTGTCCTTT
 
24
CGCATCCTTCTATTGTTCTTCCTTATTGTTCTCGTTTTTTTTATACTCTGCGACTCCGAA
 
25
ACAACAAAATCTCGAAGGCAAGCTAAGGTAAAAATATTCACCACTAAACGAGCAATGACA
 
26
GTTATATTCAAACGTCATTCTACTTTTTTGCCAGAGAAGTCCTCACTGGAGACGAAGTTG
 
27
GTAAATGCTTTATTTATATTAAACGTAGATCTATAAAGTTTAAATAGTTTATAATGCTTA
 
28
ACAAGGGACGATGTTATCTCTT
 
29
>WashU_Scas_Contig614.8 YER014W 5' untranslated region, Contig c614 13890 - 15889(revcom), 2000 bp (revcom)
 
30
CTGATTCAATTGTTCGTGTGTATGTTCTTGAAAGCCCTTGCAACGGTGTTCAGGTTGTTC
 
31
TGATTCTTCTCCCTGTTTATGTGCTGCTGTCTCGAGAAATGAAGACACATTTTTCAAGAT
 
32
CCGAAGCTTATACGATTCTCACGGGACAAACAATGGGCGTTTCATATGTAGACAATTTGC
 
33
AAGTCAAAAAGAACGCCAATCTTTCACCAGAATATATTAATATATGAAATATATATGTGC
 
34
CTATAAATACTACCTTTTGACACCCAATGCTCTTTCTCTTGATTGTCTAATGGAACTTAA
 
35
CCTCCAAGAATTTTGATCTTTA
 
36
>WashU_Sklu_Contig2060.2 YER014W 5' untranslated region, Contig c2060 550 - 2549, 2000 bp (revcom)
 
37
TGAATACACTTTACTACTTCACCTTTTCGTACTTTCAATAGTTTGTAATTCAATCGTTTG
 
38
CAAATACTATGTTTCCTTTTTTTTTTTTCACCATTCCGTCATTACACTCCTATACGAGAA
 
39
ATACATACTAAAATAAAAAAAAAAAAAAAAGCTTATGTAATCTATCTCTTGATACCCAAA
 
40
GCTCTTTCCTTTGACTGTCTGATGGAGCTCAACCTCCAAGAGTCCTGATCCTTTGCAAAC
 
41
TTGTTGTGAAGAGGAACGATCTTAGCCTTTTTCCTGCTTTCACTATCTGCACCTGCAACT
 
42
TTATAATAGTGAGGAGCACTTT