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Viewing changes to configure.in

  • Committer: Bazaar Package Importer
  • Author(s): Charles Plessy
  • Date: 2011-02-08 16:11:12 UTC
  • mfrom: (1.1.7 upstream)
  • Revision ID: james.westby@ubuntu.com-20110208161112-1fvt0mtygl8rhajf
Tags: 0.5.9-1
* New usptream release
  - Upstream moved to GitHub (debian/upstream-metadata.yaml).
  - Checked copyright; one file was removed (debian/copyright).
* Migrated the Debian source package to Git (debian/control).
* Use Debhelper 8 (debian/control, debian/compat).

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Lines of Context:
configure.in
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#                                               -*- Autoconf -*-
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# Process this file with autoconf to produce a configure script.
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AC_PREREQ(2.61)
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AC_INIT([bwa], [0.5.5])
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AC_CONFIG_SRCDIR([bntseq.c])
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AC_CONFIG_HEADER([config.h])
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AC_CONFIG_MACRO_DIR([m4])
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AM_INIT_AUTOMAKE()
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# Checks for programs.
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AC_PROG_CC([gcc])
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AC_PROG_CXX([g++])
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AC_PROG_INSTALL
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AC_PROG_AWK
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AC_PROG_MKDIR_P
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AC_PROG_RANLIB
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# Checks for libraries.
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# Checks for header files.
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AC_HEADER_STDC
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AC_CHECK_HEADERS([limits.h stdint.h stdlib.h string.h unistd.h])
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# Checks for typedefs, structures, and compiler characteristics.
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AC_C_CONST
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AC_C_INLINE
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AC_TYPE_INT32_T
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AC_TYPE_INT64_T
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AC_TYPE_SIZE_T
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AC_TYPE_UINT16_T
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AC_TYPE_UINT32_T
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AC_TYPE_UINT64_T
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AC_TYPE_UINT8_T
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# Checks for library functions.
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AC_FUNC_MALLOC
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AC_FUNC_REALLOC
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AC_FUNC_VPRINTF
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AC_CHECK_FUNCS([memmove memset sqrt strdup strstr])
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AC_CHECK_LIB([m],[log])
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AC_CHECK_LIB([z],[gzopen])
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AC_CHECK_LIB([pthread],[pthread_create])
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ACX_PTHREAD
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AC_CONFIG_FILES([Makefile
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                 bwt_gen/Makefile])
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AC_OUTPUT