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  • Committer: Bazaar Package Importer
  • Author(s): Charles Plessy
  • Date: 2011-02-08 16:11:12 UTC
  • mfrom: (1.1.7 upstream)
  • Revision ID: james.westby@ubuntu.com-20110208161112-1fvt0mtygl8rhajf
Tags: 0.5.9-1
* New usptream release
  - Upstream moved to GitHub (debian/upstream-metadata.yaml).
  - Checked copyright; one file was removed (debian/copyright).
* Migrated the Debian source package to Git (debian/control).
* Use Debhelper 8 (debian/control, debian/compat).

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Makefile.am
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## Makefile.am -- Process this file with automake to produce Makefile.in
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ACLOCAL_AMFLAGS=-I m4
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AM_CFLAGS = -Wall -m64 -fPIC
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bin_PROGRAMS = bwa
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noinst_LIBRARIES = libbwacore.a
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libbwacore_a_SOURCES = utils.c bwt.c bwtio.c bwtaln.c bwtgap.c bntseq.c \
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        stdaln.c bwaseqio.c bwase.c kstring.c cs2nt.c 
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bwa_SOURCES = is.c bwtmisc.c bwtindex.c simple_dp.c bwape.c \
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        bwtsw2_core.c bwtsw2_main.c bwtsw2_aux.c bwt_lite.c bwtsw2_chain.c \
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        main.c
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bwa_LDADD = bwt_gen/libbwtgen.a libbwacore.a
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man_MANS= bwa.1
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SUBDIRS= bwt_gen .