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Viewing changes to algo/blast/core/blast_options.c

  • Committer: Package Import Robot
  • Author(s): Aaron M. Ucko, Andreas Tille
  • Date: 2012-06-24 22:54:29 UTC
  • mfrom: (1.1.12)
  • Revision ID: package-import@ubuntu.com-20120624225429-y81u0gzrppi3fhyf
Tags: 6.1.20120620-2
[ Andreas Tille ]
debian/upstream: Strings containing ': ' need to be quoted.

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algo/blast/core/blast_options.c
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/* $Id: blast_options.c,v 1.215 2011/02/09 14:39:32 kazimird Exp $
 
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/* $Id: blast_options.c,v 1.217 2012/04/20 12:54:33 kazimird Exp $
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 * ===========================================================================
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 *
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 *                            PUBLIC DOMAIN NOTICE
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#ifndef SKIP_DOXYGEN_PROCESSING
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static char const rcsid[] = 
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    "$Id: blast_options.c,v 1.215 2011/02/09 14:39:32 kazimird Exp $";
 
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    "$Id: blast_options.c,v 1.217 2012/04/20 12:54:33 kazimird Exp $";
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#endif /* SKIP_DOXYGEN_PROCESSING */
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#include <algo/blast/core/blast_options.h>
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    if (ext_options->compositionBasedStats != eNoCompositionBasedStats)
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    {
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            if (!Blast_QueryIsPssm(program_number) && program_number != eBlastTypeTblastn && 
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                 program_number != eBlastTypeBlastp) {
 
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                 program_number != eBlastTypeBlastp &&
 
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                 program_number != eBlastTypeBlastx &&
 
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                 program_number != eBlastTypePsiBlast) {
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                        Blast_MessageWrite(blast_msg, eBlastSevWarning, kBlastMessageNoContext,
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                            "Compositional adjustments are only supported with blastp or tblastn");
 
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                            "Compositional adjustments are only supported with blastp, blastx, or tblastn");
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                        return BLASTERR_OPTION_VALUE_INVALID;
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            }
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            if (!score_options->gapped_calculation) {