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  • Committer: Package Import Robot
  • Author(s): Aaron M. Ucko, Andreas Tille
  • Date: 2012-06-24 22:54:29 UTC
  • mfrom: (1.1.12)
  • Revision ID: package-import@ubuntu.com-20120624225429-y81u0gzrppi3fhyf
Tags: 6.1.20120620-2
[ Andreas Tille ]
debian/upstream: Strings containing ': ' need to be quoted.

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demo/blastclust.c
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static char const rcsid[] = "$Id: blastclust.c,v 6.49 2007/12/21 14:00:47 madden Exp $";
 
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static char const rcsid[] = "$Id: blastclust.c,v 6.50 2011/12/19 18:40:17 gouriano Exp $";
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/*  $RCSfile: blastclust.c,v $  $Revision: 6.49 $  $Date: 2007/12/21 14:00:47 $
 
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/*  $RCSfile: blastclust.c,v $  $Revision: 6.50 $  $Date: 2011/12/19 18:40:17 $
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* ===========================================================================
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*
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*                            PUBLIC DOMAIN NOTICE
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*
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* ---------------------------------------------------------------------------
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* $Log: blastclust.c,v $
 
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* Revision 6.50  2011/12/19 18:40:17  gouriano
 
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* Corrected printf formatting. NOJIRA
 
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*
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* Revision 6.49  2007/12/21 14:00:47  madden
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* Exit if query cannot be processed, JIRA SB-32
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*
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    for (index=0; index<num_clusters; index++) {
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        for (i=0; i<cluster[index]->size; i++) {
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            if (numeric_id_type)
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                fprintf(global_fp, "%ld ", cluster[index]->elements[i]->gi); 
 
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                fprintf(global_fp, "%d ", cluster[index]->elements[i]->gi); 
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            else 
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                fprintf(global_fp, "%s ", cluster[index]->elements[i]->id);
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            MemFree(cluster[index]->elements[i]);
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           for (i=0; i<num_queries; i++) {
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               if (gi_list[i] > 0) {
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                   id_list[i] = (CharPtr) MemNew(10);
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                   sprintf(id_list[i], "%ld", gi_list[i]);
 
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                   sprintf(id_list[i], "%d", gi_list[i]);
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               }
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               total_id_len += StringLen(id_list[i]) + 1;
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           }
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        DayTimeStr(timestr, TRUE, TRUE);
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        if (finish_incomplete)
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            fprintf(progressfp, 
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               "%s Finish clustering of %ld queries, starting from query %ld\n", 
 
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               "%s Finish clustering of %d queries, starting from query %d\n", 
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                    timestr, num_queries, first_seq);
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        else
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            fprintf(progressfp, "%s Start clustering of %ld queries\n", 
 
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            fprintf(progressfp, "%s Start clustering of %d queries\n", 
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                    timestr, num_queries);
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    }
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          if (print_progress && (index + 1)%PROGRESS_INTERVAL == 0) {
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             DayTimeStr(timestr, TRUE, TRUE);
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             fprintf(progressfp, "%s Finished processing of %ld queries\n", 
 
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             fprintf(progressfp, "%s Finished processing of %d queries\n", 
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                     timestr, index+1);
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          }
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       } /* End of loop on queries */