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Viewing changes to src/demo/ode/reaction/README

Committer: Anders Logg
Date: 2007-01-10 09:04:44 UTC
mfrom: (1689.1.221 trunk)
Revision ID: logg@simula.no-20070110090444-ecyux3n1qnei4i8h

Remove old head

files added:
doc/manual/chapters/design.tex

doc/manual/dia

doc/manual/dia/class-diagram-la.dia

doc/manual/eps/class-diagram-la.eps

dolfin.pc.in

m4/ax_boost_base.m4

m4/ax_compiler_vendor.m4

m4/libtool.m4

m4/libxml.m4

numpy.conf

petsc.conf

slepc.conf

src/bench

src/bench/Makefile.am

src/bench/Makefile.in

src/bench/README

src/bench/fem

src/bench/fem/Makefile.am

src/bench/fem/Makefile.in

src/bench/fem/assembly

src/bench/fem/assembly/AdvectionOperator_3D_3_FER.form

src/bench/fem/assembly/AdvectionOperator_3D_3_FER.h

src/bench/fem/assembly/AdvectionOperator_3D_3_FFC.form

src/bench/fem/assembly/AdvectionOperator_3D_3_FFC.h

src/bench/fem/assembly/Makefile

src/bench/fem/assembly/README

src/bench/fem/assembly/bench.log

src/bench/fem/assembly/bench.py

src/bench/fem/assembly/main.cpp

src/bench/fem/convergence

src/bench/fem/convergence/Makefile

src/bench/fem/convergence/Poisson2D_1.form

src/bench/fem/convergence/Poisson2D_1.h

src/bench/fem/convergence/Poisson2D_2.form

src/bench/fem/convergence/Poisson2D_2.h

src/bench/fem/convergence/Poisson2D_3.form

src/bench/fem/convergence/Poisson2D_3.h

src/bench/fem/convergence/Poisson2D_4.form

src/bench/fem/convergence/Poisson2D_4.h

src/bench/fem/convergence/Poisson2D_5.form

src/bench/fem/convergence/Poisson2D_5.h

src/bench/fem/convergence/Poisson3D_1.form

src/bench/fem/convergence/Poisson3D_1.h

src/bench/fem/convergence/Poisson3D_2.form

src/bench/fem/convergence/Poisson3D_2.h

src/bench/fem/convergence/Poisson3D_3.form

src/bench/fem/convergence/Poisson3D_3.h

src/bench/fem/convergence/Poisson3D_4.form

src/bench/fem/convergence/Poisson3D_4.h

src/bench/fem/convergence/Poisson3D_5.form

src/bench/fem/convergence/Poisson3D_5.h

src/bench/fem/convergence/README

src/bench/fem/convergence/bench.log

src/bench/fem/convergence/bench.py

src/bench/fem/convergence/main.cpp

src/bench/la

src/bench/la/Makefile.am

src/bench/la/Makefile.in

src/bench/la/bench.log

src/bench/la/bench.py

src/bench/la/sparse-matrix

src/bench/la/sparse-matrix/Makefile

src/bench/la/sparse-matrix/Poisson.form

src/bench/la/sparse-matrix/Poisson.h

src/bench/la/sparse-matrix/VectorPoisson.form

src/bench/la/sparse-matrix/VectorPoisson.h

src/bench/la/sparse-matrix/main.cpp

src/bench/la/vector

src/bench/la/vector/Makefile

src/bench/la/vector/main.cpp

src/bench/mesh

src/bench/mesh/Makefile

src/bench/mesh/bench.log

src/bench/mesh/bench.py

src/bench/mesh/main.cpp

src/bench/ode

src/bench/ode/Makefile.am

src/bench/ode/Makefile.in

src/bench/ode/reaction

src/bench/ode/reaction/Makefile

src/bench/ode/reaction/README

src/bench/ode/reaction/bench-domain.log

src/bench/ode/reaction/bench-domain.py

src/bench/ode/reaction/bench-overhead.log

src/bench/ode/reaction/bench-overhead.py

src/bench/ode/reaction/bench-plot.py

src/bench/ode/reaction/bench-tol.log

src/bench/ode/reaction/bench-tol.py

src/bench/ode/reaction/bench.log

src/bench/ode/reaction/bench.py

src/bench/ode/reaction/benchutil.py

src/bench/ode/reaction/checkerror.py

src/bench/ode/reaction/main.cpp

src/bench/ode/reaction/parameters-bench.xml

src/bench/ode/reaction/parameters-plot.xml

src/bench/ode/reaction/parameters-reference.xml

src/bench/ode/reaction/reference_1000.data

src/bench/ode/reaction/reference_16000.data

src/bench/ode/reaction/reference_2000.data

src/bench/ode/reaction/reference_4000.data

src/bench/ode/reaction/reference_8000.data

src/bench/ode/wave

src/bench/ode/wave/Makefile

src/bench/ode/wave/bench.log

src/bench/ode/wave/bench.py

src/bench/ode/wave/main.cpp

src/bench/ode/wave/parameters-bench.xml

src/bench/ode/wave/slit.xml.gz

src/demo/mesh/plot.py

src/demo/meshfunction

src/demo/meshfunction/Makefile

src/demo/meshfunction/main.cpp

src/demo/meshfunction/mesh2D.xml.gz

src/demo/meshfunction/meshfunction.xml

src/demo/nls/cahn-hilliard

src/demo/nls/cahn-hilliard/CahnHilliard2D.form

src/demo/nls/cahn-hilliard/CahnHilliard2D.h

src/demo/nls/cahn-hilliard/CahnHilliard3D.form

src/demo/nls/cahn-hilliard/CahnHilliard3D.h

src/demo/nls/cahn-hilliard/Makefile

src/demo/nls/cahn-hilliard/main.cpp

src/demo/nls/cahn-hilliard/plot.py

src/demo/nls/nonlinearpoisson/plot.py

src/demo/ode/aliev-panfilov

src/demo/ode/aliev-panfilov/Makefile

src/demo/ode/aliev-panfilov/main.cpp

src/demo/ode/aliev-panfilov/plot.py

src/demo/ode/complex/plot.py

src/demo/ode/courtemanche

src/demo/ode/courtemanche/Makefile

src/demo/ode/courtemanche/main.cpp

src/demo/ode/courtemanche/plot.py

src/demo/ode/harmonic

src/demo/ode/harmonic/Makefile

src/demo/ode/harmonic/main.cpp

src/demo/ode/harmonic/plot.py

src/demo/ode/homotopy/simple/plot.py

src/demo/ode/lorenz/plot.py

src/demo/ode/stiff/plot.py

src/demo/pde/bidomain

src/demo/pde/bidomain/Bidomain.form

src/demo/pde/bidomain/Bidomain.h

src/demo/pde/bidomain/Makefile

src/demo/pde/bidomain/main.cpp

src/demo/pde/convection-diffusion/plot.py

src/demo/pde/dg

src/demo/pde/dg/Makefile

src/demo/pde/dg/Poisson.form

src/demo/pde/dg/Poisson.h

src/demo/pde/dg/Projection.form

src/demo/pde/dg/Projection.h

src/demo/pde/dg/main.cpp

src/demo/pde/dg/plot.py

src/demo/pde/elasticity/plot.py

src/demo/pde/functional

src/demo/pde/functional/EnergyNorm.form

src/demo/pde/functional/EnergyNorm.h

src/demo/pde/functional/Makefile

src/demo/pde/functional/main.cpp

src/demo/pde/nonlinear/nonlinear-poisson/plot.py

src/demo/pde/poisson/plot.py

src/demo/pde/stokes/stabilized/plot.py

src/demo/pde/stokes/taylor-hood/plot.py

src/demo/scripting/pydolfin/output.py

src/demo/scripting/pydolfin/projection

src/demo/scripting/pydolfin/projection/projectiondemo.py

src/demo/scripting/pydolfin/solvers/elasticity-tpde

src/demo/scripting/pydolfin/solvers/elasticity-tpde/composite

src/demo/scripting/pydolfin/solvers/elasticity-tpde/composite/Coefficients.h

src/demo/scripting/pydolfin/solvers/elasticity-tpde/composite/Coefficients.i

src/demo/scripting/pydolfin/solvers/elasticity-tpde/composite/Elasticity.form

src/demo/scripting/pydolfin/solvers/elasticity-tpde/composite/elasticityform.py

src/demo/scripting/pydolfin/solvers/elasticity-tpde/composite/elasticitypde.py

src/demo/scripting/pydolfin/solvers/elasticity-tpde/composite/elasticitysolver.py

src/demo/scripting/pydolfin/solvers/elasticity-tpde/composite/plot.py

src/demo/scripting/pydolfin/solvers/elasticity-tpde/composite/tetmesh-4.xml.gz

src/demo/scripting/pydolfin/solvers/elasticity-tpde/manual

src/demo/scripting/pydolfin/solvers/elasticity-tpde/manual/Elasticity.form

src/demo/scripting/pydolfin/solvers/elasticity-tpde/manual/elasticitypde.py

src/demo/scripting/pydolfin/solvers/elasticity-tpde/manual/elasticitysolver.py

src/demo/scripting/pydolfin/solvers/elasticity-tpde/manual/plot.py

src/demo/scripting/pydolfin/solvers/elasticity-tpde/manual/tetmesh-4.xml.gz

src/demo/scripting/pydolfin/solvers/elasticity-updated

src/demo/scripting/pydolfin/solvers/elasticity-updated/diff

src/demo/scripting/pydolfin/solvers/elasticity-updated/diff/ElasticityLoad.form

src/demo/scripting/pydolfin/solvers/elasticity-updated/diff/ElasticityUpdatedEq.form

src/demo/scripting/pydolfin/solvers/elasticity-updated/diff/ElasticityUpdatedStress.form

src/demo/scripting/pydolfin/solvers/elasticity-updated/diff/diffpde.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/diff/geometry.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/diff/plot.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/diff/problem.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/diff/tetmesh-1c.xml.gz

src/demo/scripting/pydolfin/solvers/elasticity-updated/diff/transform.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/direct

src/demo/scripting/pydolfin/solvers/elasticity-updated/direct/ElasticityDirect.form

src/demo/scripting/pydolfin/solvers/elasticity-updated/direct/ElasticityLoad.form

src/demo/scripting/pydolfin/solvers/elasticity-updated/direct/directpde.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/direct/geometry.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/direct/plot.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/direct/problem.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/direct/tetmesh-1c.xml.gz

src/demo/scripting/pydolfin/solvers/elasticity-updated/direct/transform.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/Coefficients.h

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/Coefficients.i

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/ElasticityLoad.form

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/ElasticityUpdatedEq.form

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/ElasticityUpdatedStress.form

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/diffpde.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/geometry.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/plot.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/problem.py

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/tetmesh-1c.xml.gz

src/demo/scripting/pydolfin/solvers/elasticity-updated/plast/transform.py

src/demo/scripting/pydolfin/solvers/poisson/Poisson.form

src/demo/solvers/convdiff/plot.py

src/demo/solvers/elasticity-updated/plot.py

src/demo/solvers/elasticity-updated/tetmesh-1c.xml.gz

src/demo/solvers/elasticity/plot.py

src/demo/solvers/heat/plot.py

src/demo/solvers/plasticity

src/demo/solvers/plasticity/Makefile

src/demo/solvers/plasticity/main.cpp

src/demo/solvers/plasticity/plot.py

src/demo/solvers/poisson/plot.py

src/demo/solvers/stokes/plot.py

src/kernel/fem/DofMap.cpp

src/kernel/fem/dolfin/DofMap.h

src/kernel/io/NewXMLMesh.cpp

src/kernel/io/XMLMeshFunction.cpp

src/kernel/io/dolfin/NewXMLMesh.h

src/kernel/io/dolfin/XMLMeshFunction.h

src/kernel/la/PETScEigenvalueSolver.cpp

src/kernel/la/PETScKrylovMatrix.cpp

src/kernel/la/PETScKrylovSolver.cpp

src/kernel/la/PETScLUSolver.cpp

src/kernel/la/PETScMatrix.cpp

src/kernel/la/PETScPreconditioner.cpp

src/kernel/la/PETScVector.cpp

src/kernel/la/dolfin/DenseMatrix.h

src/kernel/la/dolfin/DenseVector.h

src/kernel/la/dolfin/GenericMatrix.h

src/kernel/la/dolfin/GenericVector.h

src/kernel/la/dolfin/KrylovMethod.h

src/kernel/la/dolfin/LUSolver.h

src/kernel/la/dolfin/PETScEigenvalueSolver.h

src/kernel/la/dolfin/PETScKrylovMatrix.h

src/kernel/la/dolfin/PETScKrylovSolver.h

src/kernel/la/dolfin/PETScLUSolver.h

src/kernel/la/dolfin/PETScLinearSolver.h

src/kernel/la/dolfin/PETScMatrix.h

src/kernel/la/dolfin/PETScPreconditioner.h

src/kernel/la/dolfin/PETScVector.h

src/kernel/la/dolfin/SparseMatrix.h

src/kernel/la/dolfin/SparseVector.h

src/kernel/la/dolfin/uBlasDenseMatrix.h

src/kernel/la/dolfin/uBlasDummyPreconditioner.h

src/kernel/la/dolfin/uBlasILUPreconditioner.h

src/kernel/la/dolfin/uBlasKrylovMatrix.h

src/kernel/la/dolfin/uBlasKrylovSolver.h

src/kernel/la/dolfin/uBlasLUSolver.h

src/kernel/la/dolfin/uBlasLinearSolver.h

src/kernel/la/dolfin/uBlasMatrix.h

src/kernel/la/dolfin/uBlasPreconditioner.h

src/kernel/la/dolfin/uBlasSparseMatrix.h

src/kernel/la/dolfin/uBlasVector.h

src/kernel/la/dolfin/ublas.h

src/kernel/la/uBlasDummyPreconditioner.cpp

src/kernel/la/uBlasILUPreconditioner.cpp

src/kernel/la/uBlasKrylovMatrix.cpp

src/kernel/la/uBlasKrylovSolver.cpp

src/kernel/la/uBlasLUSolver.cpp

src/kernel/la/uBlasVector.cpp

src/kernel/mesh/BoundaryComputation.cpp

src/kernel/mesh/BoundaryMesh.cpp

src/kernel/mesh/CellType.cpp

src/kernel/mesh/Facet.cpp

src/kernel/mesh/GeometricPredicates.cpp

src/kernel/mesh/Interval.cpp

src/kernel/mesh/LocalMeshCoarsening.cpp

src/kernel/mesh/LocalMeshRefinement.cpp

src/kernel/mesh/MeshConnectivity.cpp

src/kernel/mesh/MeshEditor.cpp

src/kernel/mesh/MeshEntity.cpp

src/kernel/mesh/MeshEntityIterator.cpp

src/kernel/mesh/MeshGeometry.cpp

src/kernel/mesh/MeshTopology.cpp

src/kernel/mesh/TopologyComputation.cpp

src/kernel/mesh/UniformMeshRefinement.cpp

src/kernel/mesh/dolfin/BoundaryComputation.h

src/kernel/mesh/dolfin/BoundaryMesh.h

src/kernel/mesh/dolfin/CellType.h

src/kernel/mesh/dolfin/Facet.h

src/kernel/mesh/dolfin/GeometricPredicates.h

src/kernel/mesh/dolfin/Interval.h

src/kernel/mesh/dolfin/LocalMeshCoarsening.h

src/kernel/mesh/dolfin/LocalMeshRefinement.h

src/kernel/mesh/dolfin/MeshConnectivity.h

src/kernel/mesh/dolfin/MeshEditor.h

src/kernel/mesh/dolfin/MeshEntity.h

src/kernel/mesh/dolfin/MeshEntityIterator.h

src/kernel/mesh/dolfin/MeshFunction.h

src/kernel/mesh/dolfin/MeshGeometry.h

src/kernel/mesh/dolfin/MeshTopology.h

src/kernel/mesh/dolfin/TopologyComputation.h

src/kernel/mesh/dolfin/UniformMeshRefinement.h

src/kernel/mesh/predicates_init.h

src/kernel/mesh/rounding.h

src/kernel/mf

src/kernel/mf/Makefile.am

src/kernel/mf/Makefile.in

src/kernel/mf/MatrixFactory.cpp

src/kernel/mf/dolfin

src/kernel/mf/dolfin/ConvectionMatrix.h

src/kernel/mf/dolfin/LoadVector.h

src/kernel/mf/dolfin/Makefile.am

src/kernel/mf/dolfin/Makefile.in

src/kernel/mf/dolfin/MassMatrix.h

src/kernel/mf/dolfin/MatrixFactory.h

src/kernel/mf/dolfin/StiffnessMatrix.h

src/kernel/mf/dolfin/dolfin_mf.h

src/kernel/mf/ffc-forms

src/kernel/mf/ffc-forms/ConvectionMatrix2D.form

src/kernel/mf/ffc-forms/ConvectionMatrix2D.h

src/kernel/mf/ffc-forms/ConvectionMatrix3D.form

src/kernel/mf/ffc-forms/ConvectionMatrix3D.h

src/kernel/mf/ffc-forms/LoadVector2D.form

src/kernel/mf/ffc-forms/LoadVector2D.h

src/kernel/mf/ffc-forms/LoadVector3D.form

src/kernel/mf/ffc-forms/LoadVector3D.h

src/kernel/mf/ffc-forms/MassMatrix2D.form

src/kernel/mf/ffc-forms/MassMatrix2D.h

src/kernel/mf/ffc-forms/MassMatrix3D.form

src/kernel/mf/ffc-forms/MassMatrix3D.h

src/kernel/mf/ffc-forms/StiffnessMatrix2D.form

src/kernel/mf/ffc-forms/StiffnessMatrix2D.h

src/kernel/mf/ffc-forms/StiffnessMatrix3D.form

src/kernel/mf/ffc-forms/StiffnessMatrix3D.h

src/kernel/pde/TimeDependentPDE.cpp

src/kernel/pde/dolfin/TimeDependentPDE.h

src/modules/navierstokes/dolfin/NSEDualContinuity2D.form

src/modules/navierstokes/dolfin/NSEDualContinuity2D.h

src/modules/navierstokes/dolfin/NSEDualContinuity3D.form

src/modules/navierstokes/dolfin/NSEDualContinuity3D.h

src/modules/navierstokes/dolfin/NSEDualMomentum2D.form

src/modules/navierstokes/dolfin/NSEDualMomentum2D.h

src/modules/navierstokes/dolfin/NSEDualMomentum3D.form

src/modules/plasticity

src/modules/plasticity/DruckerPrager.cpp

src/modules/plasticity/Makefile.am

src/modules/plasticity/Makefile.in

src/modules/plasticity/PlasticityModel.cpp

src/modules/plasticity/PlasticityProblem.cpp

src/modules/plasticity/PlasticitySolver.cpp

src/modules/plasticity/ReturnMapping.cpp

src/modules/plasticity/VonMises.cpp

src/modules/plasticity/dolfin

src/modules/plasticity/dolfin/DruckerPrager.h

src/modules/plasticity/dolfin/Makefile.am

src/modules/plasticity/dolfin/Makefile.in

src/modules/plasticity/dolfin/Output2D.form

src/modules/plasticity/dolfin/Output2D.h

src/modules/plasticity/dolfin/Output3D.form

src/modules/plasticity/dolfin/Output3D.h

src/modules/plasticity/dolfin/Plas2D.form

src/modules/plasticity/dolfin/Plas2D.h

src/modules/plasticity/dolfin/Plas3D.form

src/modules/plasticity/dolfin/Plas3D.h

src/modules/plasticity/dolfin/PlasticityModel.h

src/modules/plasticity/dolfin/PlasticityProblem.h

src/modules/plasticity/dolfin/PlasticitySolver.h

src/modules/plasticity/dolfin/ReturnMapping.h

src/modules/plasticity/dolfin/Strain2D.form

src/modules/plasticity/dolfin/Strain2D.h

src/modules/plasticity/dolfin/Strain3D.form

src/modules/plasticity/dolfin/Strain3D.h

src/modules/plasticity/dolfin/Tangent2D.form

src/modules/plasticity/dolfin/Tangent2D.h

src/modules/plasticity/dolfin/Tangent3D.form

src/modules/plasticity/dolfin/Tangent3D.h

src/modules/plasticity/dolfin/VonMises.h

src/modules/plasticity/dolfin/dolfin_plasticity.h

src/modules/plasticity/dolfin/ep_strain2D.form

src/modules/plasticity/dolfin/ep_strain2D.h

src/modules/plasticity/dolfin/ep_strain3D.form

src/modules/plasticity/dolfin/ep_strain3D.h

src/modules/plasticity/dolfin/p_strain2D.form

src/modules/plasticity/dolfin/p_strain2D.h

src/modules/plasticity/dolfin/p_strain3D.form

src/modules/plasticity/dolfin/p_strain3D.h

src/pydolfin/assemble.py

src/pydolfin/dolfin_fem.i

src/pydolfin/dolfin_fem_post.i

src/pydolfin/dolfin_glue.cpp

src/pydolfin/dolfin_glue.h

src/pydolfin/dolfin_la.i

src/pydolfin/dolfin_mesh.i

src/pydolfin/dolfin_mesh_post.i

src/pydolfin/dolfin_mesh_pre.i

src/pydolfin/dolfin_ode.i

src/pydolfin/projection.py

src/test/la

src/test/la/__init__.py

src/test/la/algebraUBlas.py

src/test/la/createUBlas.py

src/test/la/solverUBlas.py

src/test/la/test.py

src/test/mesh

src/test/mesh/__init__.py

src/test/mesh/test.py

src/test/passembly

src/test/passembly/Makefile

src/test/passembly/main.cpp

src/test/test.py

src/test/tmp

src/test/tmp/L2Norm.form

src/test/tmp/L2Norm.h

src/test/tmp/Makefile

src/test/tmp/main.cpp

src/test/tmp/newmesh.xml.gz

src/test/tmp/oldmesh.xml.gz

src/utils/convert/test_gmsh.msh

src/utils/convert/test_old_xml.xml

src/utils/convert/test_tetgen.mesh

src/utils/emacs

src/utils/emacs/macros

src/utils/swig

src/utils/swig/Makefile.am

src/utils/swig/Makefile.in

src/utils/swig/dolfin-swig

src/utils/vim

src/utils/vim/macros

src/utils/xml/convertall

files removed:
doc/misc/cvs

doc/misc/releasing

scripts/preparedist

src/config

src/config/Makefile.am

src/config/Makefile.in

src/config/config.sh

src/config/dolfin-config.template

src/config/dolfin-swig

src/config/dolfin-swig.template

src/config/swig.sh

src/demo/fem/convergence

src/demo/fem/convergence/Makefile

src/demo/fem/convergence/Poisson2D_1.form

src/demo/fem/convergence/Poisson2D_1.h

src/demo/fem/convergence/Poisson2D_2.form

src/demo/fem/convergence/Poisson2D_2.h

src/demo/fem/convergence/Poisson2D_3.form

src/demo/fem/convergence/Poisson2D_3.h

src/demo/fem/convergence/Poisson2D_4.form

src/demo/fem/convergence/Poisson2D_4.h

src/demo/fem/convergence/Poisson2D_5.form

src/demo/fem/convergence/Poisson2D_5.h

src/demo/fem/convergence/Poisson3D_1.form

src/demo/fem/convergence/Poisson3D_1.h

src/demo/fem/convergence/Poisson3D_2.form

src/demo/fem/convergence/Poisson3D_2.h

src/demo/fem/convergence/Poisson3D_3.form

src/demo/fem/convergence/Poisson3D_3.h

src/demo/fem/convergence/Poisson3D_4.form

src/demo/fem/convergence/Poisson3D_4.h

src/demo/fem/convergence/Poisson3D_5.form

src/demo/fem/convergence/Poisson3D_5.h

src/demo/fem/convergence/README

src/demo/fem/convergence/main.cpp

src/demo/ode/bistable

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src/kernel/ode/dolfin/MultiAdaptiveJacobian.h

src/kernel/ode/dolfin/MultiAdaptiveNewtonSolver.h

src/kernel/ode/dolfin/MultiAdaptivePreconditioner.h

src/kernel/ode/dolfin/MultiAdaptiveTimeSlab.h

src/kernel/ode/dolfin/MultiAdaptivity.h

src/kernel/ode/dolfin/ODE.h

src/kernel/ode/dolfin/ReducedModel.h

src/kernel/ode/dolfin/TimeSlab.h

src/kernel/ode/dolfin/TimeSlabJacobian.h

src/kernel/ode/dolfin/TimeSlabSolver.h

src/kernel/ode/dolfin/UpdatedMultiAdaptiveJacobian.h

src/kernel/ode/dolfin/cGqMethod.h

src/kernel/ode/dolfin/dGqMethod.h

src/kernel/ode/dolfin/dolfin_ode.h

src/kernel/parameter/Makefile.in

src/kernel/parameter/ParameterSystem.cpp

src/kernel/parameter/Parametrized.cpp

src/kernel/parameter/dolfin/DefaultParameters.h

src/kernel/parameter/dolfin/Makefile.in

src/kernel/parameter/dolfin/Parameter.h

src/kernel/parameter/dolfin/Parametrized.h

src/kernel/pde/LinearPDE.cpp

src/kernel/pde/Makefile.am

src/kernel/pde/Makefile.in

src/kernel/pde/NonlinearPDE.cpp

src/kernel/pde/PDE.cpp

src/kernel/pde/dolfin/GenericPDE.h

src/kernel/pde/dolfin/LinearPDE.h

src/kernel/pde/dolfin/Makefile.in

src/kernel/pde/dolfin/NonlinearPDE.h

src/kernel/pde/dolfin/PDE.h

src/kernel/pde/dolfin/dolfin_pde.h

src/kernel/quadrature/GaussQuadrature.cpp

src/kernel/quadrature/GaussianQuadrature.cpp

src/kernel/quadrature/LobattoQuadrature.cpp

src/kernel/quadrature/Makefile.in

src/kernel/quadrature/Quadrature.cpp

src/kernel/quadrature/RadauQuadrature.cpp

src/kernel/quadrature/dolfin/GaussianQuadrature.h

src/kernel/quadrature/dolfin/Makefile.in

src/kernel/quadrature/dolfin/Quadrature.h

src/lib/Makefile.in

src/modules/Makefile.am

src/modules/Makefile.in

src/modules/convdiff/ConvectionDiffusionSolver.cpp

src/modules/convdiff/Makefile.in

src/modules/convdiff/dolfin/ConvectionDiffusion2D.form

src/modules/convdiff/dolfin/ConvectionDiffusion2D.h

src/modules/convdiff/dolfin/ConvectionDiffusion3D.form

src/modules/convdiff/dolfin/ConvectionDiffusion3D.h

src/modules/convdiff/dolfin/ConvectionDiffusionSolver.h

src/modules/convdiff/dolfin/Makefile.in

src/modules/dolfin/Makefile.in

src/modules/dolfin/Solver.h

src/modules/dolfin/dolfin_modules.h

src/modules/elasticity-updated/ElasticityUpdatedSolver.cpp

src/modules/elasticity-updated/Makefile.in

src/modules/elasticity-updated/dolfin/ElasticityUpdated.form

src/modules/elasticity-updated/dolfin/ElasticityUpdated.h

src/modules/elasticity-updated/dolfin/ElasticityUpdatedMass.form

src/modules/elasticity-updated/dolfin/ElasticityUpdatedMass.h

src/modules/elasticity-updated/dolfin/ElasticityUpdatedSigma.form

src/modules/elasticity-updated/dolfin/ElasticityUpdatedSigma.h

src/modules/elasticity-updated/dolfin/ElasticityUpdatedSolver.h

src/modules/elasticity-updated/dolfin/Makefile.in

src/modules/elasticity/ElasticitySolver.cpp

src/modules/elasticity/Makefile.in

src/modules/elasticity/dolfin/Elasticity-alternative.form

src/modules/elasticity/dolfin/Elasticity.form

src/modules/elasticity/dolfin/Elasticity.h

src/modules/elasticity/dolfin/ElasticityMass.form

src/modules/elasticity/dolfin/ElasticityMass.h

src/modules/elasticity/dolfin/ElasticitySolver.h

src/modules/elasticity/dolfin/Makefile.in

src/modules/heat/HeatSolver.cpp

src/modules/heat/Makefile.in

src/modules/heat/dolfin/Heat.form

src/modules/heat/dolfin/Heat.h

src/modules/heat/dolfin/HeatSolver.h

src/modules/heat/dolfin/Makefile.in

src/modules/navierstokes/Makefile.in

src/modules/navierstokes/NSESolver.cpp

src/modules/navierstokes/dolfin/Makefile.in

src/modules/navierstokes/dolfin/NSEContinuity2D.form

src/modules/navierstokes/dolfin/NSEContinuity2D.h

src/modules/navierstokes/dolfin/NSEContinuity3D.form

src/modules/navierstokes/dolfin/NSEContinuity3D.h

src/modules/navierstokes/dolfin/NSEMomentum2D.form

src/modules/navierstokes/dolfin/NSEMomentum2D.h

src/modules/navierstokes/dolfin/NSEMomentum3D.form

src/modules/navierstokes/dolfin/NSEMomentum3D.h

src/modules/navierstokes/dolfin/NSESolver.h

src/modules/poisson/Makefile.in

src/modules/poisson/PoissonSolver.cpp

src/modules/poisson/dolfin/Makefile.in

src/modules/poisson/dolfin/Poisson2D.form

src/modules/poisson/dolfin/Poisson2D.h

src/modules/poisson/dolfin/Poisson3D.form

src/modules/poisson/dolfin/Poisson3D.h

src/modules/poisson/dolfin/PoissonSolver.h

src/modules/stokes/Makefile.in

src/modules/stokes/StokesSolver.cpp

src/modules/stokes/dolfin/L2Error.form

src/modules/stokes/dolfin/L2Error.h

src/modules/stokes/dolfin/Makefile.in

src/modules/stokes/dolfin/Stokes2D.form

src/modules/stokes/dolfin/Stokes2D.h

src/modules/stokes/dolfin/Stokes3D.form

src/modules/stokes/dolfin/Stokes3D.h

src/modules/stokes/dolfin/StokesSolver.h

src/pydolfin/Makefile.am

src/pydolfin/Makefile.in

src/pydolfin/README

src/pydolfin/__init__.py

src/pydolfin/dolfin.i

src/pydolfin/import_form.py

src/utils/Makefile.am

src/utils/Makefile.in

src/utils/convert/Makefile.in

src/utils/convert/dolfin-convert

src/utils/inp2dx/Makefile.in

Show diffs side-by-side

added added

removed removed

src/demo/ode/reaction/README

1

Reference solutions correct to within a tolerance of 2e-14.

2

Computed with mono-adaptive cG(3) and a fixed time step of

3

size k = 0.00005.

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