~ubuntu-branches/debian/stretch/r-cran-rnexml/stretch

« back to all changes in this revision

Viewing changes to inst/examples/ncbii.xml

  • Committer: Package Import Robot
  • Author(s): Andreas Tille
  • Date: 2016-04-08 13:58:39 UTC
  • Revision ID: package-import@ubuntu.com-20160408135839-ilq08z8v8p414qpn
Tags: upstream-2.0.6
ImportĀ upstreamĀ versionĀ 2.0.6

Show diffs side-by-side

added added

removed removed

Lines of Context:
 
1
<nex:nexml xmlns:nex="http://www.nexml.org/2009" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:cdao="http://www.evolutionaryontology.org/cdao/1.0/cdao.owl#" xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:cc="http://creativecommons.org/ns#" xmlns:ncbi="http://www.ncbi.nlm.nih.gov/taxonomy#" xmlns:tc="http://rs.tdwg.org/ontology/voc/TaxonConcept#" xmlns="http://www.nexml.org/2009" version="0.9" generator="RNeXML">
 
2
  <meta xsi:type="LiteralMeta" property="dc:date" datatype="xsd:string" content="2013-11-19"/>
 
3
  <meta xsi:type="ResourceMeta" href="http://creativecommons.org/publicdomain/zero/1.0/" rel="cc:license"/>
 
4
  <otus id="tax1">
 
5
    <otu label="Struthioniformes" id="t1">
 
6
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/8798" rel="tc:toTaxon"/>
 
7
    </otu>
 
8
    <otu label="Tinamiformes" id="t2">
 
9
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/8802" rel="tc:toTaxon"/>
 
10
    </otu>
 
11
    <otu label="Craciformes" id="t3">
 
12
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/8976" rel="tc:toTaxon"/>
 
13
    </otu>
 
14
    <otu label="Galliformes" id="t4">
 
15
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/8976" rel="tc:toTaxon"/>
 
16
    </otu>
 
17
    <otu label="Anseriformes" id="t5">
 
18
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/8826" rel="tc:toTaxon"/>
 
19
    </otu>
 
20
    <otu label="Turniciformes" id="t6">
 
21
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/9245" rel="tc:toTaxon"/>
 
22
    </otu>
 
23
    <otu label="Piciformes" id="t7">
 
24
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/9219" rel="tc:toTaxon"/>
 
25
    </otu>
 
26
    <otu label="Galbuliformes" id="t8">
 
27
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/118184" rel="tc:toTaxon"/>
 
28
    </otu>
 
29
    <otu label="Bucerotiformes" id="t9">
 
30
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/57379" rel="tc:toTaxon"/>
 
31
    </otu>
 
32
    <otu label="Upupiformes" id="t10">
 
33
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/57389" rel="tc:toTaxon"/>
 
34
    </otu>
 
35
    <otu label="Trogoniformes" id="t11">
 
36
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/56308" rel="tc:toTaxon"/>
 
37
    </otu>
 
38
    <otu label="Coraciiformes" id="t12">
 
39
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/8936" rel="tc:toTaxon"/>
 
40
    </otu>
 
41
    <otu label="Coliiformes" id="t13">
 
42
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/57384" rel="tc:toTaxon"/>
 
43
    </otu>
 
44
    <otu label="Cuculiformes" id="t14">
 
45
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/8940" rel="tc:toTaxon"/>
 
46
    </otu>
 
47
    <otu label="Psittaciformes" id="t15">
 
48
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/9223" rel="tc:toTaxon"/>
 
49
    </otu>
 
50
    <otu label="Apodiformes" id="t16">
 
51
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/8892" rel="tc:toTaxon"/>
 
52
    </otu>
 
53
    <otu label="Trochiliformes" id="t17">
 
54
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/9241" rel="tc:toTaxon"/>
 
55
    </otu>
 
56
    <otu label="Musophagiformes" id="t18">
 
57
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/56301" rel="tc:toTaxon"/>
 
58
    </otu>
 
59
    <otu label="Strigiformes" id="t19">
 
60
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/30458" rel="tc:toTaxon"/>
 
61
    </otu>
 
62
    <otu label="Columbiformes" id="t20">
 
63
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/8929" rel="tc:toTaxon"/>
 
64
    </otu>
 
65
    <otu label="Gruiformes" id="t21">
 
66
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/9108" rel="tc:toTaxon"/>
 
67
    </otu>
 
68
    <otu label="Ciconiiformes" id="t22">
 
69
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/8920" rel="tc:toTaxon"/>
 
70
    </otu>
 
71
    <otu label="Passeriformes" id="t23">
 
72
      <meta xsi:type="ResourceMeta" href="http://ncbi.nlm.nih.gov/taxonomy/9126" rel="tc:toTaxon"/>
 
73
    </otu>
 
74
  </otus>
 
75
  <trees id="Trees" otus="tax1">
 
76
    <tree xsi:type="nex:FloatTree" id="tree1">
 
77
      <node id="n24"/>
 
78
      <node id="n25"/>
 
79
      <node id="n26"/>
 
80
      <node id="n27"/>
 
81
      <node id="n28"/>
 
82
      <node id="n29"/>
 
83
      <node id="n30"/>
 
84
      <node id="n31"/>
 
85
      <node id="n32"/>
 
86
      <node id="n33"/>
 
87
      <node id="n34"/>
 
88
      <node id="n35"/>
 
89
      <node id="n36"/>
 
90
      <node id="n37"/>
 
91
      <node id="n38"/>
 
92
      <node id="n39"/>
 
93
      <node id="n40"/>
 
94
      <node id="n41"/>
 
95
      <node id="n42"/>
 
96
      <node id="n43"/>
 
97
      <node id="n44"/>
 
98
      <node id="n45"/>
 
99
      <node id="n1" otu="t1"/>
 
100
      <node id="n2" otu="t2"/>
 
101
      <node id="n3" otu="t3"/>
 
102
      <node id="n4" otu="t4"/>
 
103
      <node id="n5" otu="t5"/>
 
104
      <node id="n6" otu="t6"/>
 
105
      <node id="n7" otu="t7"/>
 
106
      <node id="n8" otu="t8"/>
 
107
      <node id="n9" otu="t9"/>
 
108
      <node id="n10" otu="t10"/>
 
109
      <node id="n11" otu="t11"/>
 
110
      <node id="n12" otu="t12"/>
 
111
      <node id="n13" otu="t13"/>
 
112
      <node id="n14" otu="t14"/>
 
113
      <node id="n15" otu="t15"/>
 
114
      <node id="n16" otu="t16"/>
 
115
      <node id="n17" otu="t17"/>
 
116
      <node id="n18" otu="t18"/>
 
117
      <node id="n19" otu="t19"/>
 
118
      <node id="n20" otu="t20"/>
 
119
      <node id="n21" otu="t21"/>
 
120
      <node id="n22" otu="t22"/>
 
121
      <node id="n23" otu="t23"/>
 
122
      <edge id="e1" source="n24" target="n25" length="2.1"/>
 
123
      <edge id="e2" source="n25" target="n26" length="4.1"/>
 
124
      <edge id="e3" source="n26" target="n1" length="21.8"/>
 
125
      <edge id="e4" source="n26" target="n2" length="21.8"/>
 
126
      <edge id="e5" source="n25" target="n27" length="3"/>
 
127
      <edge id="e6" source="n27" target="n28" length="1.3"/>
 
128
      <edge id="e7" source="n28" target="n3" length="21.6"/>
 
129
      <edge id="e8" source="n28" target="n4" length="21.6"/>
 
130
      <edge id="e9" source="n27" target="n5" length="22.9"/>
 
131
      <edge id="e10" source="n24" target="n29" length="1"/>
 
132
      <edge id="e11" source="n29" target="n6" length="27"/>
 
133
      <edge id="e12" source="n29" target="n30" length="0.7"/>
 
134
      <edge id="e13" source="n30" target="n7" length="26.3"/>
 
135
      <edge id="e14" source="n30" target="n31" length="1.3"/>
 
136
      <edge id="e15" source="n31" target="n32" length="0.6"/>
 
137
      <edge id="e16" source="n32" target="n8" length="24.4"/>
 
138
      <edge id="e17" source="n32" target="n33" length="1"/>
 
139
      <edge id="e18" source="n33" target="n34" length="2.6"/>
 
140
      <edge id="e19" source="n34" target="n9" length="20.8"/>
 
141
      <edge id="e20" source="n34" target="n10" length="20.8"/>
 
142
      <edge id="e21" source="n33" target="n35" length="1.3"/>
 
143
      <edge id="e22" source="n35" target="n11" length="22.1"/>
 
144
      <edge id="e23" source="n35" target="n12" length="22.1"/>
 
145
      <edge id="e24" source="n31" target="n36" length="0.5"/>
 
146
      <edge id="e25" source="n36" target="n13" length="24.5"/>
 
147
      <edge id="e26" source="n36" target="n37" length="0.8"/>
 
148
      <edge id="e27" source="n37" target="n14" length="23.7"/>
 
149
      <edge id="e28" source="n37" target="n38" length="0.6"/>
 
150
      <edge id="e29" source="n38" target="n15" length="23.1"/>
 
151
      <edge id="e30" source="n38" target="n39" length="0.6"/>
 
152
      <edge id="e31" source="n39" target="n40" length="0.6"/>
 
153
      <edge id="e32" source="n40" target="n41" length="0.6"/>
 
154
      <edge id="e33" source="n41" target="n16" length="21.3"/>
 
155
      <edge id="e34" source="n41" target="n17" length="21.3"/>
 
156
      <edge id="e35" source="n40" target="n42" length="1.5"/>
 
157
      <edge id="e36" source="n42" target="n18" length="20.4"/>
 
158
      <edge id="e37" source="n42" target="n19" length="20.4"/>
 
159
      <edge id="e38" source="n39" target="n43" length="0.9"/>
 
160
      <edge id="e39" source="n43" target="n44" length="0.8"/>
 
161
      <edge id="e40" source="n44" target="n20" length="20.8"/>
 
162
      <edge id="e41" source="n44" target="n45" length="0.7"/>
 
163
      <edge id="e42" source="n45" target="n21" length="20.1"/>
 
164
      <edge id="e43" source="n45" target="n22" length="20.1"/>
 
165
      <edge id="e44" source="n43" target="n23" length="21.6"/>
 
166
    </tree>
 
167
  </trees>
 
168
</nex:nexml>
 
 
b'\\ No newline at end of file'