5
cur="${COMP_WORDS[COMP_CWORD]}"
6
prev="${COMP_WORDS[COMP_CWORD-1]}"
8
opts="intersect window closest coverage map genomecov merge cluster
9
complement subtract slop flank sort random shuffle annotate multiinter
10
unionbedg pairtobed pairtopair bamtobed bedtobam bamtofastq bedpetobam
11
bed12tobed6 getfasta maskfasta nuc multicov tag jaccard overlap igv
12
links makewindows groupby expand"
16
COMPREPLY=( $(compgen -f -W "${opts}" -- "$cur") )
21
complete -F _bedtools -o default bedtools