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Viewing changes to testdata/cds_feature_with_multiple_parents.gff3

  • Committer: Package Import Robot
  • Author(s): Sascha Steinbiss
  • Date: 2012-07-09 14:10:23 UTC
  • Revision ID: package-import@ubuntu.com-20120709141023-juuu4spm6chqsf9o
Tags: upstream-1.4.1
Import upstream version 1.4.1

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testdata/cds_feature_with_multiple_parents.gff3
 
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##gff-version   3
 
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##sequence-region   3L 8617473 8631957
 
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3L      FlyBase gene    8617473 8631773 .       +       .       ID=gene1;Name=Zasp66;fullname=Z band alternatively spliced PDZ-motif protein 66;Alias=FBgn0045924,anon-WO0153538.30,CG6416,Zasp66;Ontology_term=SO:0000010,SO:0000087,GO:0007498,GO:0030018,GO:0008157;Dbxref=FlyBase:FBan0006416,FlyBase_Annotation_IDs:CG6416,GB_protein:AAN11990,GB_protein:ACZ94656,GB_protein:ACZ94657,GB_protein:AAN11991,GB_protein:ACZ94655,GB_protein:ACZ94653,GB_protein:AAN11992,GB_protein:ACZ94654,GB_protein:AAF50384,GB_protein:AAO41263,GB_protein:AAO41264,GB_protein:AAF50386,GB_protein:AAO41265,GB:AA697154,GB:AI388325,GB:AW940728,GB:AW941338,GB:AX201646,GB:AY058415,GB_protein:AAL13644,GB:AY060961,GB_protein:AAL28509,UniProt/TrEMBL:Q7KUB5,UniProt/TrEMBL:Q86BH5,UniProt/TrEMBL:Q86BH6,UniProt/TrEMBL:Q8IQB4,UniProt/TrEMBL:Q95S47,UniProt/TrEMBL:Q95TZ7,UniProt/TrEMBL:Q9VSN0,UniProt/TrEMBL:Q9VSN2,INTERPRO:IPR001478,INTERPRO:IPR006643,EntrezGene:38988,UniProt/TrEMBL:E1JI73,UniProt/TrEMBL:E1JI76,UniProt/TrEMBL:E1JI74,UniProt/TrEMBL:E1JI77,UniProt/TrEMBL:Q058U1,InterologFinder:38988,BIOGRID:64396,FlyAtlas:CG6416-RG%3BCG6416-RG%3BCG6416-RE,GenomeRNAi:38988;gbunit=AE014296;derived_computed_cyto=66D9-66D9
 
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3L      FlyBase mRNA    8617473 8631773 .       +       .       ID=mRNA1;Parent=gene1;Name=Zasp66-RE;Alias=CG6416-RE;Dbxref=FlyBase_Annotation_IDs:CG6416-RE,REFSEQ:NM_168283;score_text=Moderately Supported;score=7
 
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3L      FlyBase CDS     8617583 8617783 .       +       0       Parent=mRNA1;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase CDS     8620061 8620209 .       +       0       Parent=mRNA1;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase CDS     8620527 8620830 .       +       1       Parent=mRNA1;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase CDS     8628781 8628852 .       +       1       Parent=mRNA1;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase CDS     8630539 8630698 .       +       1       Parent=mRNA1;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase CDS     8631367 8631453 .       +       0       Parent=mRNA1;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase mRNA    8623308 8631773 .       +       .       ID=mRNA11;Parent=gene1;Name=Zasp66-RH;Alias=CG6416-RH;Dbxref=FlyBase_Annotation_IDs:CG6416-RH,REFSEQ:NM_176304;score_text=Strongly Supported;score=15
 
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3L      FlyBase CDS     8623655 8623735 .       +       0       Parent=mRNA11;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase CDS     8627683 8627883 .       +       0       Parent=mRNA1,mRNA11;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase CDS     8628102 8628181 .       +       0       Parent=mRNA1,mRNA11;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase CDS     8631257 8631295 .       +       1       Parent=mRNA1,mRNA11;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase CDS     8631367 8631373 .       +       1       Parent=mRNA11;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase mRNA    8623308 8631773 .       +       .       ID=mRNA12;Parent=gene1;Name=Zasp66-RI;Alias=CG6416-RI;Dbxref=FlyBase_Annotation_IDs:CG6416-RI,REFSEQ:NM_176303;score_text=Moderately Supported;score=7
 
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3L      FlyBase mRNA    8623370 8631773 .       +       .       ID=mRNA13;Parent=gene1;Name=Zasp66-RJ;Alias=CG6416-RG,CG6416-RJ;Dbxref=FlyBase_Annotation_IDs:CG6416-RJ,REFSEQ:NM_176306;score_text=Moderately Supported;score=7
 
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3L      FlyBase CDS     8623655 8623735 .       +       0       Parent=mRNA13;Name=Zasp66-cds;parent_type=mRNA
 
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3L      FlyBase CDS     8630539 8630698 .       +       1       Parent=mRNA13;Name=Zasp66-cds;parent_type=mRNA
 
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