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  • Committer: Bazaar Package Importer
  • Author(s): Aaron M. Ucko
  • Date: 2009-08-11 22:03:47 UTC
  • mfrom: (1.4.1 upstream)
  • mto: This revision was merged to the branch mainline in revision 10.
  • Revision ID: james.westby@ubuntu.com-20090811220347-g4b6lzdvphvvbpiu
* New upstream release.
* debian/libncbi6.symbols: update accordingly.
* debian/control: clean up obsolete or redundant relationship declarations.

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algo/blast/api/blast_tabular.c
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/* $Id: blast_tabular.c,v 1.39 2007/03/20 15:17:16 kans Exp $
 
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/* $Id: blast_tabular.c,v 1.41 2009/06/01 14:33:38 maning Exp $
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* ===========================================================================
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*
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*                            PUBLIC DOMAIN NOTICE
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 */
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#ifndef SKIP_DOXYGEN_PROCESSING
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static char const rcsid[] = "$Id: blast_tabular.c,v 1.39 2007/03/20 15:17:16 kans Exp $";
 
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static char const rcsid[] = "$Id: blast_tabular.c,v 1.41 2009/06/01 14:33:38 maning Exp $";
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#endif /* SKIP_DOXYGEN_PROCESSING */
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#include <algo/blast/api/blast_tabular.h>
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#include <algo/blast/core/blast_engine.h>
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#include <algo/blast/core/blast_traceback.h>
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#include <algo/blast/api/blast_format.h>
 
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#include <algo/blast/api/hspfilter_queue.h>
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#include <algo/blast/api/blast_seqalign.h>
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#include <algo/blast/core/blast_seqsrc_impl.h>
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#include <algo/blast/core/gencode_singleton.h>
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    * FIXME*/
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   rdfp = (ReadDBFILE*) _BlastSeqSrcImpl_GetDataStructure(seq_src);
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   while (BlastHSPStreamRead(tf_data->hsp_stream, &hsp_list) 
 
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   while (BlastHSPQueueRead(tf_data->hsp_stream->writer->data, &hsp_list) 
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          != kBlastHSPStream_Eof) {
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       Int4 subject_length; 
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      if (!hsp_list) {