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  • Committer: Bazaar Package Importer
  • Author(s): Aaron M. Ucko
  • Date: 2009-08-11 22:03:47 UTC
  • mfrom: (1.4.1 upstream)
  • mto: This revision was merged to the branch mainline in revision 10.
  • Revision ID: james.westby@ubuntu.com-20090811220347-g4b6lzdvphvvbpiu
* New upstream release.
* debian/libncbi6.symbols: update accordingly.
* debian/control: clean up obsolete or redundant relationship declarations.

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desktop/cdrgn.c
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*
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* Version Creation Date:   1/22/95
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*
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* $Revision: 6.117 $
 
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* $Revision: 6.120 $
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*
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* File Description: 
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*
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          protbsp != NULL && protbsp->length > 0) {
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        nucbsp = (BioseqPtr) sep->data.ptrvalue;
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        slp = PredictCodingRegion (nucbsp, protbsp, code);
 
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        if (slp != NULL && SeqLocStop (slp) > nucbsp->length - 1) {
 
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          Message (MSG_ERROR, "Warning!  Nucleotide is not long enough for protein sequence!");
 
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        }
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        PointerToDialog (cfp->location, slp);
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        if (slp != NULL) {
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          cfp->locvisited = TRUE;
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  if (desired_cds_len < loc_len) {
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    /* truncate to correct length */
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    orig_slp = TruncateLocation (orig_slp, desired_cds_len);
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    PointerToDialog (cfp->location, orig_slp);
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    DoTranslateProtein (cfp);
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  }
 
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  SetSeqLocPartial (orig_slp, partial5, FALSE);
 
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  PointerToDialog (cfp->location, orig_slp);
 
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  DoTranslateProtein (cfp);
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  prot = MemFree (prot);
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  orig_slp = SeqLocFree (orig_slp);
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}
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        gbq->val = str;
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      }
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    }
 
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  } else {
 
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    /* product should now be in extension, this is an old qualifier no longer needed */
 
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    RemoveQualByName (sfp, "product");
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  }
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}
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