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Viewing changes to test/primer_global_err/max_opt_tm_int.out2

Committer: Bazaar Package Importer
Author(s): Charles Plessy
Date: 2006-09-28 20:18:54 UTC
Revision ID: james.westby@ubuntu.com-20060928201854-45pwapz5e3a6d684

Tags: upstream-1.0b

Import upstream version 1.0b

files added:

Copyright.txt

README.primer3_1.0b.txt

example

how-to-cite.txt

src

src/Makefile

src/boulder_input.c

src/boulder_input.h

src/dpal.c

src/dpal.h

src/format_output.c

src/format_output.h

src/long_seq_tm_test_main.c

src/ntdpal_main.c

src/oligotm.c

src/oligotm.h

src/oligotm_main.c

src/primer3.c

src/primer3.h

src/primer3_main.c

src/primer3_release.h

src/release_notes.txt

test

test/dpal_gen.pl

test/dpal_input

test/dpal_long_input

test/dpal_long_score_output

test/dpal_output

test/dpal_score_output

test/dpal_test.pl

test/long_seq_input

test/long_seq_output

test/long_seq_tm_test.pl

test/not_for_production.lib

test/not_for_production_Ns.lib

test/not_for_production_Xs.lib

test/p3-tmpl-mispriming_input

test/p3-tmpl-mispriming_output

test/p3test.pl

test/primer1_input

test/primer1_list_last

test/primer1_list_last/AGAG.for

test/primer1_list_last/AGAG.rev

test/primer1_list_last/SP01-02.txt.for

test/primer1_list_last/SP01-02.txt.rev

test/primer1_list_last/SP01-03.txt.for

test/primer1_list_last/SP01-03.txt.rev

test/primer1_list_last/SP01-06.txt.for

test/primer1_list_last/SP01-06.txt.rev

test/primer1_list_last/SP01-19.txt.for

test/primer1_list_last/SP01-19.txt.rev

test/primer1_list_last/SP01-21.txt.for

test/primer1_list_last/SP01-21.txt.rev

test/primer1_list_last/SP04-07.txt.for

test/primer1_list_last/SP04-07.txt.rev

test/primer1_list_last/included_test.for

test/primer1_list_last/included_test.rev

test/primer1_list_last/included_test_w_middle.for

test/primer1_list_last/included_test_w_middle.int

test/primer1_list_last/included_test_w_middle.rev

test/primer1_list_last/long_seq.for

test/primer1_list_last/long_seq.rev

test/primer1_list_last/targets_test.for

test/primer1_list_last/targets_test.rev

test/primer1_list_tmp

test/primer1_output

test/primer_boundary1_formatted_output

test/primer_boundary1_input

test/primer_boundary1_output

test/primer_boundary_formatted_output

test/primer_boundary_input

test/primer_boundary_output

test/primer_check_input

test/primer_check_output

test/primer_end_pathology_input

test/primer_end_pathology_output

test/primer_global_err

test/primer_global_err/MAX_PRIMER_LENGTH.in

test/primer_global_err/MAX_PRIMER_LENGTH.out

test/primer_global_err/MAX_PRIMER_LENGTH.out2

test/primer_global_err/bad_dna_conc.in

test/primer_global_err/bad_dna_conc.out

test/primer_global_err/bad_dna_conc.out2

test/primer_global_err/bad_float_1.in

test/primer_global_err/bad_float_1.out

test/primer_global_err/bad_float_1.out2

test/primer_global_err/bad_float_2.in

test/primer_global_err/bad_float_2.out

test/primer_global_err/bad_float_2.out2

test/primer_global_err/bad_float_3.in

test/primer_global_err/bad_float_3.out

test/primer_global_err/bad_float_3.out2

test/primer_global_err/bad_float_4.in

test/primer_global_err/bad_float_4.out

test/primer_global_err/bad_float_4.out2

test/primer_global_err/bad_gc_1.in

test/primer_global_err/bad_gc_1.out

test/primer_global_err/bad_gc_1.out2

test/primer_global_err/bad_gc_2.in

test/primer_global_err/bad_gc_2.out

test/primer_global_err/bad_gc_2.out2

test/primer_global_err/bad_gc_3.in

test/primer_global_err/bad_gc_3.out

test/primer_global_err/bad_gc_3.out2

test/primer_global_err/bad_gc_int_1.in

test/primer_global_err/bad_gc_int_1.out

test/primer_global_err/bad_gc_int_1.out2

test/primer_global_err/bad_gc_int_2.in

test/primer_global_err/bad_gc_int_2.out

test/primer_global_err/bad_gc_int_2.out2

test/primer_global_err/bad_gc_int_3.in

test/primer_global_err/bad_gc_int_3.out

test/primer_global_err/bad_gc_int_3.out2

test/primer_global_err/bad_num_ns.in

test/primer_global_err/bad_num_ns.out

test/primer_global_err/bad_num_ns.out2

test/primer_global_err/bad_num_ns_int.in

test/primer_global_err/bad_num_ns_int.out

test/primer_global_err/bad_num_ns_int.out2

test/primer_global_err/bad_product_sizes_1.in

test/primer_global_err/bad_product_sizes_1.out

test/primer_global_err/bad_product_sizes_1.out2

test/primer_global_err/bad_product_sizes_2.in

test/primer_global_err/bad_product_sizes_2.out

test/primer_global_err/bad_product_sizes_2.out2

test/primer_global_err/bad_product_sizes_3.in

test/primer_global_err/bad_product_sizes_3.out

test/primer_global_err/bad_product_sizes_3.out2

test/primer_global_err/bad_product_sizes_4.in

test/primer_global_err/bad_product_sizes_4.out

test/primer_global_err/bad_product_sizes_4.out2

test/primer_global_err/bad_salt_conc.in

test/primer_global_err/bad_salt_conc.out

test/primer_global_err/bad_salt_conc.out2

test/primer_global_err/bad_self_any.in

test/primer_global_err/bad_self_any.out

test/primer_global_err/bad_self_any.out2

test/primer_global_err/bad_self_any_int.in

test/primer_global_err/bad_self_any_int.out

test/primer_global_err/bad_self_any_int.out2

test/primer_global_err/bad_self_end.in

test/primer_global_err/bad_self_end.out

test/primer_global_err/bad_self_end.out2

test/primer_global_err/bad_self_end_int.in

test/primer_global_err/bad_self_end_int.out

test/primer_global_err/bad_self_end_int.out2

test/primer_global_err/empty_1.in

test/primer_global_err/empty_1.out

test/primer_global_err/empty_1.out2

test/primer_global_err/empty_product_size.in

test/primer_global_err/empty_product_size.out

test/primer_global_err/empty_product_size.out2

test/primer_global_err/gc_clamp_min_size.in

test/primer_global_err/gc_clamp_min_size.out

test/primer_global_err/gc_clamp_min_size.out2

test/primer_global_err/incorrect_task.in

test/primer_global_err/incorrect_task.out

test/primer_global_err/incorrect_task.out2

test/primer_global_err/io_gc_content_obj_fn.in

test/primer_global_err/io_gc_content_obj_fn.out

test/primer_global_err/io_gc_content_obj_fn.out2

test/primer_global_err/io_obj_fn.in

test/primer_global_err/io_obj_fn.out

test/primer_global_err/io_obj_fn.out2

test/primer_global_err/max_min_tm.in

test/primer_global_err/max_min_tm.out

test/primer_global_err/max_min_tm.out2

test/primer_global_err/max_min_tm_int.in

test/primer_global_err/max_min_tm_int.out

test/primer_global_err/max_min_tm_int.out2

test/primer_global_err/max_opt_tm.in

test/primer_global_err/max_opt_tm.out

test/primer_global_err/max_opt_tm.out2

test/primer_global_err/max_opt_tm_int.in

test/primer_global_err/max_opt_tm_int.out

test/primer_global_err/max_opt_tm_int.out2

test/primer_global_err/max_size_limit_int.in

test/primer_global_err/max_size_limit_int.out

test/primer_global_err/max_size_limit_int.out2

test/primer_global_err/max_size_min_product.in

test/primer_global_err/max_size_min_product.out

test/primer_global_err/max_size_min_product.out2

test/primer_global_err/max_size_min_product_int.in

test/primer_global_err/max_size_min_product_int.out

test/primer_global_err/max_size_min_product_int.out2

test/primer_global_err/min_opt_tm.in

test/primer_global_err/min_opt_tm.out

test/primer_global_err/min_opt_tm.out2

test/primer_global_err/min_opt_tm_int.in

test/primer_global_err/min_opt_tm_int.out

test/primer_global_err/min_opt_tm_int.out2

test/primer_global_err/mishyb_obj_fn.in

test/primer_global_err/mishyb_obj_fn.out

test/primer_global_err/mishyb_obj_fn.out2

test/primer_global_err/mispr_obj_fn.in

test/primer_global_err/mispr_obj_fn.out

test/primer_global_err/mispr_obj_fn.out2

test/primer_global_err/no_equal.in

test/primer_global_err/no_equal.out

test/primer_global_err/no_equal.out2

test/primer_global_err/no_terminal_equal.in

test/primer_global_err/no_terminal_equal.out

test/primer_global_err/no_terminal_equal.out2

test/primer_global_err/opt_max_size.in

test/primer_global_err/opt_max_size.out

test/primer_global_err/opt_max_size.out2

test/primer_global_err/opt_max_size_int.in

test/primer_global_err/opt_max_size_int.out

test/primer_global_err/opt_max_size_int.out2

test/primer_global_err/opt_min_size.in

test/primer_global_err/opt_min_size.out

test/primer_global_err/opt_min_size.out2

test/primer_global_err/opt_min_size_int.in

test/primer_global_err/opt_min_size_int.out

test/primer_global_err/opt_min_size_int.out2

test/primer_global_err/pair_mispr.in

test/primer_global_err/pair_mispr.out

test/primer_global_err/pair_mispr.out2

test/primer_global_err/pr_gc_content_obj_fn.in

test/primer_global_err/pr_gc_content_obj_fn.out

test/primer_global_err/pr_gc_content_obj_fn.out2

test/primer_global_err/product_size_obj_fn.in

test/primer_global_err/product_size_obj_fn.out

test/primer_global_err/product_size_obj_fn.out2

test/primer_global_err/product_tm_obj_fn.in

test/primer_global_err/product_tm_obj_fn.out

test/primer_global_err/product_tm_obj_fn.out2

test/primer_global_err/repeat_lib_err.in

test/primer_global_err/repeat_lib_err.out

test/primer_global_err/repeat_lib_err.out2

test/primer_global_err/repeat_lib_err1.in

test/primer_global_err/repeat_lib_err1.out

test/primer_global_err/repeat_lib_err1.out2

test/primer_global_err/repeat_lib_err2.in

test/primer_global_err/repeat_lib_err2.out

test/primer_global_err/repeat_lib_err2.out2

test/primer_global_err/repeat_lib_err3.in

test/primer_global_err/repeat_lib_err3.out

test/primer_global_err/repeat_lib_err3.out2

test/primer_global_err/repeat_lib_err4.in

test/primer_global_err/repeat_lib_err4.out

test/primer_global_err/repeat_lib_err4.out2

test/primer_global_err/repeat_lib_err5.in

test/primer_global_err/repeat_lib_err5.out

test/primer_global_err/repeat_lib_err5.out2

test/primer_global_err/repeat_lib_err6.in

test/primer_global_err/repeat_lib_err6.out

test/primer_global_err/repeat_lib_err6.out2

test/primer_global_err/repeat_lib_int_err.in

test/primer_global_err/repeat_lib_int_err.out

test/primer_global_err/repeat_lib_int_err.out2

test/primer_global_err/repeat_lib_int_err1.in

test/primer_global_err/repeat_lib_int_err1.out

test/primer_global_err/repeat_lib_int_err1.out2

test/primer_global_err/repeat_lib_int_err2.in

test/primer_global_err/repeat_lib_int_err2.out

test/primer_global_err/repeat_lib_int_err2.out2

test/primer_global_err/repeat_lib_int_err3.in

test/primer_global_err/repeat_lib_int_err3.out

test/primer_global_err/repeat_lib_int_err3.out2

test/primer_global_err/repeat_lib_int_err4.in

test/primer_global_err/repeat_lib_int_err4.out

test/primer_global_err/repeat_lib_int_err4.out2

test/primer_global_err/repeat_lib_int_err5.in

test/primer_global_err/repeat_lib_int_err5.out

test/primer_global_err/repeat_lib_int_err5.out2

test/primer_global_err/repeat_lib_int_err6.in

test/primer_global_err/repeat_lib_int_err6.out

test/primer_global_err/repeat_lib_int_err6.out2

test/primer_global_err/seq_quality1.in

test/primer_global_err/seq_quality1.out

test/primer_global_err/seq_quality1.out2

test/primer_global_err/seq_quality2.in

test/primer_global_err/seq_quality2.out

test/primer_global_err/seq_quality2.out2

test/primer_global_err/seq_quality3.in

test/primer_global_err/seq_quality3.out

test/primer_global_err/seq_quality3.out2

test/primer_global_err/seq_quality4.in

test/primer_global_err/seq_quality4.out

test/primer_global_err/seq_quality4.out2

test/primer_global_err/too_many_product_sizes.in

test/primer_global_err/too_many_product_sizes.out

test/primer_global_err/too_many_product_sizes.out2

test/primer_global_err/zero_min_size.in

test/primer_global_err/zero_min_size.out

test/primer_global_err/zero_min_size.out2

test/primer_global_err/zero_num_return.in

test/primer_global_err/zero_num_return.out

test/primer_global_err/zero_num_return.out2

test/primer_human_input

test/primer_human_output

test/primer_input

test/primer_internal1_formatted_output

test/primer_internal1_input

test/primer_internal1_output

test/primer_internal_formatted_output

test/primer_internal_input

test/primer_internal_output

test/primer_lib_amb_codes_input

test/primer_lib_amb_codes_output

test/primer_list_last

test/primer_list_last/AGAG.for

test/primer_list_last/AGAG.rev

test/primer_list_last/SP01-02.txt.for

test/primer_list_last/SP01-02.txt.rev

test/primer_list_last/SP01-03.txt.for

test/primer_list_last/SP01-03.txt.rev

test/primer_list_last/SP01-06-with-repeat1.for

test/primer_list_last/SP01-06-with-repeat1.int

test/primer_list_last/SP01-06-with-repeat1.rev

test/primer_list_last/SP01-06-with-repeat2.for

test/primer_list_last/SP01-06-with-repeat2.int

test/primer_list_last/SP01-06-with-repeat2.rev

test/primer_list_last/SP01-06-with-repeat3.for

test/primer_list_last/SP01-06-with-repeat3.int

test/primer_list_last/SP01-06-with-repeat3.rev

test/primer_list_last/SP01-06.txt.for

test/primer_list_last/SP01-06.txt.rev

test/primer_list_last/SP01-19.txt.for

test/primer_list_last/SP01-19.txt.rev

test/primer_list_last/SP01-21.txt.for

test/primer_list_last/SP01-21.txt.rev

test/primer_list_last/SP04-07.txt.for

test/primer_list_last/SP04-07.txt.rev

test/primer_list_last/case_problem_test.for

test/primer_list_last/case_problem_test.rev

test/primer_list_last/included_test.for

test/primer_list_last/included_test.rev

test/primer_list_last/included_test_w_middle.for

test/primer_list_last/included_test_w_middle.int

test/primer_list_last/included_test_w_middle.rev

test/primer_list_last/long_seq.for

test/primer_list_last/long_seq.rev

test/primer_list_last/targets_test.for

test/primer_list_last/targets_test.rev

test/primer_list_tmp

test/primer_mispriming_boundary1_formatted_output

test/primer_mispriming_boundary1_input

test/primer_mispriming_boundary1_output

test/primer_mispriming_boundary2_formatted_output

test/primer_mispriming_boundary2_input

test/primer_mispriming_boundary2_output

test/primer_mispriming_formatted_output

test/primer_mispriming_input

test/primer_mispriming_long_lib_input

test/primer_mispriming_long_lib_output

test/primer_mispriming_output

test/primer_must_use_formatted_output

test/primer_must_use_input

test/primer_must_use_output

test/primer_num_best_input

test/primer_num_best_output

test/primer_obj_fn_input

test/primer_obj_fn_output

test/primer_output

test/primer_position_penalty_formatted_output

test/primer_position_penalty_input

test/primer_position_penalty_output

test/primer_quality_boundary_input

test/primer_quality_boundary_output

test/primer_rat_input

test/primer_rat_output

test/primer_repeat_boundary1_lib

test/primer_repeat_boundary2_lib

test/primer_repeat_long_lib

test/primer_start_codon_input

test/primer_start_codon_output

test/primer_syntax_input

test/primer_syntax_output

test/primer_task_formatted_output

test/primer_task_input

test/primer_task_output

test/repeat_lib1

test/repeat_lib2

test/repeat_lib3

test/repeat_lib4

test/repeat_lib5

test/repeat_lib6

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test/primer_global_err/max_opt_tm_int.out2

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../src/primer3_core: Illegal values for PRIMER_INTERNAL_OLIGO_TM

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