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Viewing changes to algo/blast/api/blast_tabular.h

  • Committer: Bazaar Package Importer
  • Author(s): Barry deFreese
  • Date: 2006-07-19 23:28:07 UTC
  • mfrom: (1.1.5 upstream)
  • Revision ID: james.westby@ubuntu.com-20060719232807-et3cdmcjgmnyleyx
Tags: 6.1.20060507-3ubuntu1
Re-merge with Debian

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algo/blast/api/blast_tabular.h
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/* $Id: blast_tabular.h,v 1.12 2005/04/06 23:27:53 dondosha Exp $
 
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/* $Id: blast_tabular.h,v 1.13 2006/04/25 17:59:02 papadopo Exp $
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* ===========================================================================
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*
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*                            PUBLIC DOMAIN NOTICE
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   Boolean show_accession; /**< Show accessions instead of full ids in output,
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                              if possible. This option has lower priority than
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                              show_gi. */
 
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   Boolean believe_query; /**< TRUE if query identifiers are parsed; if
 
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                               FALSE, the first token in the query defline is
 
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                               treated as an identifier */
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   EBlastTabularFormatOptions format_options; /**< Tabular formatting options. */
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} BlastTabularFormatData;
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 * @param outfp Output stream to write to [in]
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 * @param query_seqloc List of query sequence locations [in]
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 * @param format_option What type of tabular output is requested? [in]
 
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 * @param believe_query Should query identifiers be parsed? [in]
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 * @return Allocated structure
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 */
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BlastTabularFormatData*
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BlastTabularFormatDataNew(FILE* outfp, SeqLoc* query_seqloc,
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                          EBlastTabularFormatOptions format_option);
 
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                          EBlastTabularFormatOptions format_option,
 
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                          Boolean believe_query);
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/** Function initializing the BlastTabularFormatData data structure fields.