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  • Committer: Package Import Robot
  • Author(s): Filippo Rusconi
  • Date: 2012-11-12 15:58:12 UTC
  • Revision ID: package-import@ubuntu.com-20121112155812-vr15wtg9b50cuesg
Tags: upstream-1.9.0
Import upstream version 1.9.0

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source/METADATA/ExperimentalSettings.C
 
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// -*- mode: C++; tab-width: 2; -*-
 
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// vi: set ts=2:
 
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//
 
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// --------------------------------------------------------------------------
 
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//                   OpenMS Mass Spectrometry Framework
 
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// --------------------------------------------------------------------------
 
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//  Copyright (C) 2003-2011 -- Oliver Kohlbacher, Knut Reinert
 
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//
 
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//  This library is free software; you can redistribute it and/or
 
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//  modify it under the terms of the GNU Lesser General Public
 
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//  License as published by the Free Software Foundation; either
 
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//  version 2.1 of the License, or (at your option) any later version.
 
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//
 
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//  This library is distributed in the hope that it will be useful,
 
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//  but WITHOUT ANY WARRANTY; without even the implied warranty of
 
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//  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
 
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//  Lesser General Public License for more details.
 
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//
 
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//  You should have received a copy of the GNU Lesser General Public
 
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//  License along with this library; if not, write to the Free Software
 
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//  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
 
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//
 
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// --------------------------------------------------------------------------
 
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// $Maintainer: Andreas Bertsch $
 
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// $Authors: Marc Sturm $
 
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// --------------------------------------------------------------------------
 
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#include <OpenMS/METADATA/ExperimentalSettings.h>
 
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using namespace std;
 
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namespace OpenMS
 
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{
 
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        ExperimentalSettings::ExperimentalSettings():
 
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                MetaInfoInterface(),
 
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                DocumentIdentifier(),
 
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                sample_(),
 
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                source_files_(),
 
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                contacts_(),
 
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                instrument_(),
 
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                hplc_(),
 
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                datetime_(),
 
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                comment_(),
 
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                protein_identifications_(),
 
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                fraction_identifier_()
 
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        {
 
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        }
 
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        ExperimentalSettings::ExperimentalSettings(const ExperimentalSettings& source):
 
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                MetaInfoInterface(source),
 
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                DocumentIdentifier(source),
 
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          sample_(source.sample_),
 
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          source_files_(source.source_files_),
 
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          contacts_(source.contacts_),
 
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          instrument_(source.instrument_),
 
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          hplc_(source.hplc_),
 
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          datetime_(source.datetime_),
 
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          comment_(source.comment_),
 
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                protein_identifications_(source.protein_identifications_),
 
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                fraction_identifier_(source.fraction_identifier_)
 
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        {
 
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        }
 
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        ExperimentalSettings::~ExperimentalSettings()
 
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        {
 
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        }
 
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        ExperimentalSettings& ExperimentalSettings::operator = (const ExperimentalSettings& source)
 
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        {
 
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          if (&source == this) return *this;
 
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    sample_ = source.sample_;
 
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    source_files_ = source.source_files_;
 
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    contacts_ = source.contacts_;
 
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    instrument_ = source.instrument_;
 
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    hplc_ = source.hplc_;
 
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    datetime_ = source.datetime_;
 
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    comment_ = source.comment_;
 
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    protein_identifications_ = source.protein_identifications_;
 
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                fraction_identifier_ = source.fraction_identifier_;
 
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    MetaInfoInterface::operator=(source);
 
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                DocumentIdentifier::operator=(source);
 
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          return *this;
 
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        }
 
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  bool ExperimentalSettings::operator== (const ExperimentalSettings& rhs) const
 
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  {
 
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        return
 
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            sample_ == rhs.sample_ &&
 
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            source_files_ == rhs.source_files_ &&
 
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            contacts_ == rhs.contacts_ &&
 
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            instrument_ == rhs.instrument_ &&
 
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            hplc_ == rhs.hplc_ &&
 
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            datetime_ == rhs.datetime_ &&
 
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        protein_identifications_ == rhs.protein_identifications_ &&
 
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        comment_ == rhs.comment_ &&
 
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                        fraction_identifier_ == rhs.fraction_identifier_ &&
 
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                MetaInfoInterface::operator==(rhs) &&
 
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                        DocumentIdentifier::operator==(rhs)
 
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                ;
 
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  }
 
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  bool ExperimentalSettings::operator!= (const ExperimentalSettings& rhs) const
 
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  {
 
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        return !(operator==(rhs));
 
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        }
 
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        const Sample& ExperimentalSettings::getSample() const 
 
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        {
 
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          return sample_; 
 
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        }
 
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        Sample&  ExperimentalSettings::getSample()
 
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        {
 
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          return sample_; 
 
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        }
 
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        void ExperimentalSettings::setSample(const Sample& sample)
 
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        {
 
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          sample_ = sample; 
 
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        }
 
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        const vector<SourceFile>& ExperimentalSettings::getSourceFiles() const 
 
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        {
 
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          return source_files_; 
 
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        }
 
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        vector<SourceFile>& ExperimentalSettings::getSourceFiles()
 
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        {
 
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          return source_files_; 
 
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        }
 
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        void ExperimentalSettings::setSourceFiles(const vector<SourceFile>& source_file)
 
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        {
 
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          source_files_ = source_file; 
 
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        }
 
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        const vector<ContactPerson>& ExperimentalSettings::getContacts() const 
 
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        {
 
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          return contacts_; 
 
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        }
 
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        vector<ContactPerson>&  ExperimentalSettings::getContacts()
 
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        {
 
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          return contacts_; 
 
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        }
 
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        void ExperimentalSettings::setContacts(const std::vector<ContactPerson>& contacts)
 
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        {
 
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          contacts_ = contacts; 
 
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        }
 
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        const Instrument& ExperimentalSettings::getInstrument() const 
 
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        {
 
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          return instrument_; 
 
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        }
 
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        Instrument&  ExperimentalSettings::getInstrument()
 
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        {
 
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          return instrument_; 
 
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        }
 
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        void ExperimentalSettings::setInstrument(const Instrument& instrument)
 
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        {
 
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          instrument_ = instrument; 
 
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        }
 
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        const DateTime& ExperimentalSettings::getDateTime() const
 
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        {
 
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                return datetime_;
 
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        }
 
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        void ExperimentalSettings::setDateTime(const DateTime& date)
 
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        {
 
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                datetime_ = date;
 
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        }
 
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        const HPLC& ExperimentalSettings::getHPLC() const
 
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        {
 
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                return hplc_;
 
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        }
 
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        HPLC& ExperimentalSettings::getHPLC()
 
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        {
 
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                return hplc_;
 
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        }
 
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        void ExperimentalSettings::setHPLC(const HPLC& hplc)
 
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        {
 
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                hplc_ = hplc;
 
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        }
 
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        std::ostream& operator << (std::ostream& os, const ExperimentalSettings& /*exp*/)
 
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        {
 
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                os << "-- EXPERIMENTALSETTINGS BEGIN --"<<std::endl;
 
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                os << "-- EXPERIMENTALSETTINGS END --"<<std::endl;
 
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                return os;
 
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        }
 
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        const vector<ProteinIdentification>& ExperimentalSettings::getProteinIdentifications() const
 
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        {
 
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        return protein_identifications_;                        
 
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        }       
 
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  vector<ProteinIdentification>& ExperimentalSettings::getProteinIdentifications()
 
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  {
 
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        return protein_identifications_;        
 
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  }
 
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  void ExperimentalSettings::setProteinIdentifications(const vector<ProteinIdentification>& protein_identifications)
 
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  {
 
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        protein_identifications_ = protein_identifications;
 
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  }
 
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        const String& ExperimentalSettings::getComment() const 
 
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        {
 
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          return comment_; 
 
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        }
 
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        void ExperimentalSettings::setComment(const String& comment)
 
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        {
 
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          comment_ = comment; 
 
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        }
 
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        const String& ExperimentalSettings::getFractionIdentifier() const 
 
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        {
 
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          return fraction_identifier_; 
 
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        }
 
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        void ExperimentalSettings::setFractionIdentifier(const String& fraction_identifier)
 
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        {
 
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          fraction_identifier_ = fraction_identifier; 
 
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        }
 
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}
 
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