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Viewing changes to algo/blast/api/repeats_filter.h

  • Committer: Bazaar Package Importer
  • Author(s): Barry deFreese
  • Date: 2006-07-19 23:28:07 UTC
  • mfrom: (1.1.5 upstream)
  • Revision ID: james.westby@ubuntu.com-20060719232807-et3cdmcjgmnyleyx
Tags: 6.1.20060507-3ubuntu1
Re-merge with Debian

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algo/blast/api/repeats_filter.h
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/* $Id: repeats_filter.h,v 1.4 2005/04/06 23:27:53 dondosha Exp $
 
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/* $Id: repeats_filter.h,v 1.5 2006/04/26 12:46:47 madden Exp $
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* ===========================================================================
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*
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*                            PUBLIC DOMAIN NOTICE                          
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#endif
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#include <objloc.h>
 
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#include <algo/blast/api/blast_message_api.h>
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/** @addtogroup CToolkitAlgoBlast
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 *
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 * @param filter_string Filtering option for a BLAST search, e.g. 
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 *                      "m L;R -d rodents.lib" [in]
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 * @param mask_loc List of repeat mask locations [out]
 
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 * @param message Used to send back error messages [out]
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 * @return Status.
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 */
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Int2 Blast_FindRepeatFilterSeqLoc(SeqLoc* query_seqloc, 
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                                  const char* filter_string, 
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                                  SeqLoc* *mask_loc);
 
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                                  SeqLoc* *mask_loc,
 
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                                  SBlastMessage **message);
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/* @} */
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