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Viewing changes to network/wwwblast/Src/test/run.pl

  • Committer: Bazaar Package Importer
  • Author(s): Barry deFreese
  • Date: 2006-07-19 23:28:07 UTC
  • mfrom: (1.1.5 upstream)
  • Revision ID: james.westby@ubuntu.com-20060719232807-et3cdmcjgmnyleyx
Tags: 6.1.20060507-3ubuntu1
Re-merge with Debian

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network/wwwblast/Src/test/run.pl
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my $diff = 'diff -w';
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my $time = &GetTimeCmd();
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my $oldbin = "/net/blast012/export/home/web/public/htdocs/BLAST/bl2seq/$app";
 
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my $oldbin = "/net/blast152/export/home/web/public/htdocs/BLAST/bl2seq/$app";
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#my $oldbin = "../wblast2.REAL.old";
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chomp(my $basedir = `pwd`);
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   $Tests{'short-subject-discmb'} = "\"PROGRAM=blastn&ONE=AE003820&SSEQ=aggacctcatcagcctcaaa&WORD=11&EXPECT=10000&MEGABLAST=yes\"";
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   $Tests{'short-subject-blastn'} = "\"PROGRAM=blastn&ONE=AE003820&SSEQ=aggacctcatcagcctcaaa&WORD=11&EXPECT=10000\"";
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   $Tests{'bare-fasta'} = "\"PROGRAM=blastn&SEQ=agcctggtaggctgcagtccatggggtcacacagagtcggacatgactgagcgacttcac&SSEQ=agcctggtaggctgcaatccatggggtcgctagagtcggacacgactgagcgacttcac&PROGRAM=blastn&FILTER=1\"";
 
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   $Tests{'cds_feature_plus'} = "\"ONE=48869482&TWO=60844&FROM=&TO=&FFROM=&TTO=&STRAND=1&FILTER=1&PROGRAM=blastn&cds_translation=on\"";
 
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   $Tests{'maks_color'} = "\"page=2&match=1&msmatch=-2&gopen=5&gext=2&dropoff=50&expect=10.000000&word=11&Filter=1&view=1&mask_char=2&mask_color=3&cds_translation=on&program=blastn&matrix=0&seq=u93236+&sseq=u93237&from=1&to=2772&ffrom=1&tto=9180\"";
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} else {
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  if ($app eq "blast_cs.REAL") {
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