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  • Committer: Bazaar Package Importer
  • Author(s): Ilya Barygin
  • Date: 2010-01-27 22:48:22 UTC
  • mfrom: (3.1.4 squeeze)
  • Revision ID: james.westby@ubuntu.com-20100127224822-ebot4qbrjxcv38au
Tags: 1.6.1-1ubuntu1
* Merge from Debian testing, remaining changes:
  - disable tests, they produce a FTBFS trying to access the network 
    during run.

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t/AlignIO/po.t
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        isa_ok($str, 'Bio::AlignIO');
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        $aln = $str->next_aln();
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        isa_ok($aln,'Bio::Align::AlignI');
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        is $aln->no_sequences, 6;
 
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        is $aln->num_sequences, 6;
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        # output is? i.e. does conversion from clustalw to po give the same alignment?
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        $str = Bio::AlignIO->new(
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        isa_ok($str,'Bio::AlignIO');
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        my $aln2 = $str->next_aln();
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        isa_ok($aln2,'Bio::Align::AlignI');
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        is $aln2->no_sequences, $aln->no_sequences;
 
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        is $aln2->num_sequences, $aln->num_sequences;
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        is $aln2->length, $aln->length;
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}