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  • Committer: Package Import Robot
  • Author(s): Charles Plessy
  • Date: 2013-09-22 13:39:48 UTC
  • mfrom: (3.1.11 sid)
  • Revision ID: package-import@ubuntu.com-20130922133948-c6z62zegjyp7ztou
Tags: 1.6.922-1
* New upstream release.
* Replaces and Breaks grinder (<< 0.5.3-3~) because of overlaping contents.
  Closes: #722910
* Stop Replacing and Breaking bioperl ( << 1.6.9 ): not needed anymore. 

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Lines of Context:
1
 
Leptospira interrogans serovar Lai str. 56601 chromosome II, complete sequence - 0..358943
2
 
367 proteins
3
 
Location        Strand  Length  PID     Gene    Synonym Code    COG     Product
4
 
15..2531        +       838     24217062        -       LB001   -       -       hypothetical protein
5
 
2491..3423      +       310     24217063        metF    LB002   -       COG0685E        5,10-methylenetetrahydrofolate reductase
6
 
3716..3823      -       35      24217064        -       LB004   -       -       hypothetical protein
7
 
3779..3886      +       35      24217065        -       LB003   -       -       hypothetical protein
8
 
4066..4890      -       274     24217066        -       LB005   -       COG2107R        hypothetical protein
9
 
4975..5085      +       36      24217067        -       LB006   -       -       hypothetical protein
10
 
5239..5754      +       171     24217068        -       LB007   -       COG0561R        hypothetical protein
11
 
5762..6112      +       116     24217069        -       LB008   -       COG0561R        hypothetical protein
12
 
6083..6373      -       96      24217070        -       LB009   -       -       hypothetical protein
13
 
6410..7279      +       289     24217071        hemA    LB010   -       COG0373H        glutamyl-tRNA reductase
14
 
7249..8892      +       547     24217072        hemC    LB011   -       -       porphobilinogen deaminase
15
 
8861..9814      +       317     24217073        hemB    LB012   -       -       delta-aminolevulinic acid dehydratase
16
 
9811..11142     +       443     24217074        hemL    LB013   -       COG0001H        glutamate-1-semialdehyde aminotransferase
17
 
11142..12059    +       305     24217075        -       LB014   -       COG0642T        two-component hybrid sensor and regulator
18
 
12056..12748    +       230     24217076        -       LB015   -       COG0745TK       two-component response regulator
19
 
12708..13760    +       350     24217077        hemE    LB016   -       COG0407H        uroporphyrinogen decarboxylase
20
 
13667..15106    +       479     24217078        hemF    LB017   -       COG0635H        coproporphyrinogen III oxidase
21
 
15186..16169    +       327     24217079        -       LB018   -       -       hypothetical protein
22
 
16244..16384    +       46      24217080        -       LB019   -       -       hypothetical protein
23
 
16381..17664    +       427     24217081        hemG    LB020   -       COG1232H        protoporphyrinogen oxidase
24
 
17941..18075    -       44      24217082        -       LB021   -       -       hypothetical protein
25
 
18395..19468    +       357     24217083        -       LB022   -       COG3547L        transposase
26
 
19839..20135    -       98      24217084        -       LB023   -       -       ferrochelatase
27
 
20176..20748    -       190     24217085        -       LB024   -       -       ferrochelatase
28
 
21008..22150    -       380     24217086        -       LB025   -       -       hypothetical protein
29
 
22312..23229    +       305     24217087        parA3   LB026   -       COG1192D        ParA protein
30
 
23222..23929    +       235     24217088        parB3   LB027   -       COG1475K        ParB protein
31
 
24029..24631    +       200     24217089        -       LB028   -       COG0431R        putative reductase
32
 
24684..24791    -       35      24217090        -       LB029   -       -       hypothetical protein
33
 
25233..26396    -       387     24217091        -       LB030   -       COG3274S        probable intercellular adhesion protein C
34
 
26476..26817    -       113     24217092        -       LB032   -       -       hypothetical protein
35
 
26492..26851    +       119     24217093        -       LB031   -       COG0664T        cyclic nucleotide dependent protein kinase
36
 
26903..27112    -       69      24217094        -       LB033   -       -       unknown protein confirmed by proteomics
37
 
27247..28002    +       251     24217095        -       LB034   -       COG1028IQR      3-oxoacyl-(acyl carrier protein) reductase
38
 
27978..28529    +       183     24217096        amsI    LB035   -       COG0394T        low molecular weight phosphotyrosine protein phosphatase
39
 
28559..29827    +       422     24217097        ndh     LB036   -       COG1252C        NADH dehydrogenase
40
 
29824..30282    +       152     24217098        -       LB037   -       -       putative sucrose/H+ symporter
41
 
30314..30475    -       53      24217099        -       LB038   -       -       hypothetical protein
42
 
30707..31315    -       202     24217100        -       LB039   -       -       hypothetical protein
43
 
31361..31627    -       88      24217101        -       LB040   -       -       hypothetical protein
44
 
31683..32507    +       274     24217102        -       LB041   -       COG1028IQR      3-oxoacyl-(acyl carrier protein) reductase
45
 
32517..32939    +       140     24217103        -       LB042   -       COG3832S        hypothetical protein
46
 
33001..33372    +       123     24217104        -       LB043   -       -       unknown protein confirmed by proteomics
47
 
33697..34767    +       356     24217105        -       LB044   -       -       hypothetical protein
48
 
35199..35384    -       61      24217106        -       LB045   -       -       hypothetical protein
49
 
35388..35525    -       45      24217107        -       LB046   -       -       hypothetical protein
50
 
36004..37326    +       440     24217108        -       LB047   -       COG2849S        hypothetical protein
51
 
37916..38989    +       357     24217109        -       LB048   -       COG3547L        putative transposase
52
 
39952..40101    +       49      24217110        -       LB049   -       -       hypothetical protein
53
 
40098..40712    +       204     24217111        -       LB050   -       -       hypothetical protein
54
 
40773..41846    +       357     24217112        -       LB051   -       COG0714R        magnesium chelatase, putative
55
 
41853..42683    +       276     24217113        -       LB052   -       COG1721R        hypothetical protein
56
 
42680..43549    +       289     24217114        -       LB053   -       -       hypothetical protein
57
 
43522..44484    +       320     24217115        vwa1    LB054   -       -       von Willebrand factor type A domain containing protein
58
 
44481..45524    +       347     24217116        vwa2    LB055   -       -       von Willebrand factor type A domain containing protein
59
 
45467..46210    +       247     24217117        -       LB056   -       -       TPR-repeat-containing protein
60
 
46207..47850    +       547     24217118        batD    LB057   -       -       BatD
61
 
47847..49670    +       607     24217119        htpG2   LB058   -       COG0326O        heat shock protein 90
62
 
49688..50257    +       189     24217120        -       LB059   -       -       hypothetical protein
63
 
50238..50729    -       163     24217121        -       LB060   -       -       hypothetical protein
64
 
50959..52557    +       532     24217122        -       LB061   -       COG3211R        hypothetical protein
65
 
52565..52909    -       114     24217123        -       LB062   -       COG1366T        anti-anti-sigma factor
66
 
52906..53925    -       339     24217124        -       LB063   -       COG0061G        hypothetical protein
67
 
53937..54044    -       35      24217125        -       LB064   -       -       hypothetical protein
68
 
54100..54918    +       272     24217126        -       LB065   -       -       hypothetical protein
69
 
54915..55394    +       159     24217127        -       LB066   -       -       hypothetical protein
70
 
55509..55622    +       37      24217128        -       LB067   -       -       hypothetical protein
71
 
55772..56593    +       273     24217129        -       LB068   -       COG1398I        fatty acid desaturase
72
 
57309..57893    +       194     24217130        -       LB069   -       -       hypothetical protein
73
 
59172..59822    +       216     24217131        -       LB070   -       COG2085R        hypothetical protein
74
 
60390..60638    +       82      24217132        -       LB071   -       -       hypothetical protein
75
 
61294..61851    +       185     24217133        -       LB072   -       -       hypothetical protein
76
 
61981..62949    -       322     24217134        -       LB073   -       COG1703E        lysine arginine ornithine transport system kinase
77
 
62957..64969    -       670     24217135        mcm2    LB074   -       COG2185I        methylmalonyl-CoA mutase
78
 
65000..65104    -       34      24217136        -       LB076   -       -       hypothetical protein
79
 
65076..66413    +       445     24217137        -       LB075   -       -       hypothetical protein
80
 
67553..68245    +       230     24217138        -       LB077   -       -       hypothetical protein
81
 
68865..69938    -       357     24217139        -       LB078   -       COG4232OC       TPR-repeat-containing protein
82
 
70067..70345    +       92      24217140        hisE    LB079   -       COG0140E        phosphoribosyl-ATP pyrophosphohydrolase
83
 
70349..72280    +       643     24217141        -       LB080   -       -       hypothetical protein
84
 
72258..72386    +       42      24217142        -       LB081   -       -       hypothetical protein
85
 
72749..73513    +       254     24217143        -       LB082   -       COG1028IQR      3-ketoacyl-acyl carrier protein reductase
86
 
74006..74239    +       77      24217144        acp     LB083   -       COG0236IQ       acyl carrier protein
87
 
74293..75036    +       247     24217145        -       LB084   -       COG0571K        ribonuclease III
88
 
75411..75998    +       195     24217146        -       LB085   -       COG1051F,COG0494LR      MutT/nudix family protein
89
 
75995..77080    +       361     24217147        aroB    LB086   -       COG0337E        3-dehydroquinate synthase
90
 
77080..77961    +       293     24217148        -       LB087   -       COG0668M        hypothetical protein
91
 
78288..78662    +       124     24217149        -       LB088   -       -       hypothetical protein
92
 
79179..80735    +       518     24217150        -       LB089   -       COG2509R        Uncharacterized FAD-dependent dehydrogenase
93
 
80785..81324    +       179     24217151        -       LB090   -       -       hypothetical protein
94
 
81632..81871    -       79      24217152        -       LB091   -       -       hypothetical protein
95
 
81925..82335    -       136     24217153        -       LB092   -       -       hypothetical protein
96
 
82392..84329    -       645     24217154        fadD    LB093   -       COG1022I        probable long-chain-fatty-acid--CoA ligase
97
 
84491..87430    +       979     24217155        cyaA17  LB094   -       COG2114T,COG0840NT      adenylate cyclase
98
 
87459..87566    -       35      24217156        -       LB095   -       -       hypothetical protein
99
 
87988..88740    -       250     24217157        -       LB096   -       COG0500QR       hypothetical protein
100
 
88780..90210    -       476     24217158        -       LB098   -       -       Predicted xylanase/chitin deacetilase
101
 
90205..90318    +       37      24217159        -       LB097   -       -       hypothetical protein
102
 
90403..90918    -       171     24217160        -       LB099   -       -       hypothetical protein
103
 
91165..91323    +       52      24217161        -       LB100   -       -       hypothetical protein
104
 
91526..91648    -       40      24217162        -       LB101   -       -       hypothetical protein
105
 
91672..92481    +       269     24217163        -       LB102   -       COG0647G        phospholysine phosphohistidine inorganic pyrophosphate phosphatase
106
 
92488..92916    -       142     24217164        -       LB103   -       COG0824R        hypothetical protein
107
 
93181..93759    -       192     24217165        -       LB104   -       COG1309K        putative TetR-family transcriptional regulator
108
 
94594..95610    +       338     24217166        -       LB105   -       COG0640K,COG0500QR      transcriptional regulator, ArsR family
109
 
95612..96922    +       436     24217167        -       LB106   -       COG0499H        S-adenosyl-L-homocysteine hydrolase
110
 
96995..97294    +       99      24217168        -       LB107   -       -       ferredoxin
111
 
97341..101084   +       1247    24217169        metH    LB108   -       COG0646E,COG1410E       B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase
112
 
101193..101531  +       112     24217170        -       LB109   -       -       hypothetical protein
113
 
101979..102911  -       310     24217171        -       LB110   -       -       putative outermembrane protein
114
 
103023..104318  +       431     24217172        -       LB111   -       COG0205G        diphosphate--fructose-6-phosphate 1-phosphotransferase
115
 
104517..106262  -       581     24217173        -       LB112   -       COG2203T,COG2208TK      putative regulatory protein contains GAF domain
116
 
106440..107324  -       294     24217174        argB    LB114   -       COG0548E        acetylglutamate kinase
117
 
107290..108132  +       280     24217175        -       LB113   -       COG1028IQR      3-oxoacyl-(acyl carrier protein) reductase
118
 
108927..109031  -       34      24217176        -       LB115   -       -       hypothetical protein
119
 
109072..110814  -       580     24217177        -       LB116   -       COG3975R        hypothetical protein
120
 
110807..111298  -       163     24217178        -       LB117   -       COG1225O        bacterioferritin comigratory protein
121
 
111451..113616  +       721     24217179        cyaA18  LB118   -       COG2114T        adenylate cyclase
122
 
114803..115147  +       114     24217180        -       LB119   -       -       hypothetical protein
123
 
115194..116291  +       365     24217181        -       LB120   -       -       hypothetical protein
124
 
116308..117120  +       270     24217182        -       LB121   -       COG1028IQR      3-oxoacyl-(acyl carrier protein) reductase
125
 
117169..118068  -       299     24217183        -       LB122   -       COG0582L        site-specific integrase/recombinase XerD related protein
126
 
118184..118723  -       179     24217184        aroK    LB123   -       COG0703E        shikimic acid kinase I
127
 
118720..119571  -       283     24217185        -       LB124   -       COG1639T        HD-GYP domain (HD superfamily hydrolase)
128
 
119577..120128  -       183     24217186        cheD2   LB125   -       COG1871NT       chemotaxis protein
129
 
120255..121481  +       408     24217187        traB    LB126   -       COG1916S        pheromone shutdown protein
130
 
121805..122368  +       187     24217188        -       LB127   -       -       hypothetical protein
131
 
122598..122750  -       50      24217189        -       LB129   -       -       hypothetical protein
132
 
122743..122871  +       42      24217190        -       LB128   -       -       hypothetical protein
133
 
123146..124291  -       381     24217191        -       LB130   -       -       transcriptional regulator, AraC family
134
 
124576..125685  -       369     24217192        -       LB131   -       -       putative transcriptional regulator, araC family protein
135
 
126389..126511  +       40      24217193        -       LB132   -       -       hypothetical protein
136
 
126928..128532  +       534     24217194        -       LB133   -       -       probable protein containing EAL domain
137
 
129379..129828  +       149     24217195        -       LB134   -       -       hypothetical protein
138
 
130629..130736  -       35      24217196        -       LB135   -       -       hypothetical protein
139
 
130768..131166  -       132     24217197        -       LB136   -       COG1366T        anti-sigma factor antagonist
140
 
131177..132175  -       332     24217198        -       LB137   -       -       hypothetical protein
141
 
132172..133629  -       485     24217199        -       LB138   -       -       hypothetical protein
142
 
133632..135125  -       497     24217200        -       LB139   -       COG2208TK       putative regulation protein contains HAMP domain
143
 
136387..136539  +       50      24217201        -       LB140   -       -       hypothetical protein
144
 
136739..137446  -       235     24217202        -       LB141   -       -       similar to putative lipoprotein qlp42
145
 
137699..138250  -       183     24217203        -       LB142   -       -       hypothetical protein
146
 
138314..139405  -       363     24217204        -       LB143   -       COG4254S        similar to putative lipoprotein qlp42
147
 
139426..139947  -       173     24217205        -       LB144   -       COG1595K        RNA polymerase ECF-type sigma factor
148
 
140082..140189  +       35      24217206        -       LB145   -       -       hypothetical protein
149
 
141064..141711  +       215     24217207        -       LB146   -       -       hypothetical protein
150
 
141831..142478  +       215     24217208        -       LB147   -       -       conserved hyperthetical protein
151
 
142975..143316  -       113     24217209        -       LB148   -       -       hypothetical protein
152
 
143870..144493  -       207     24217210        pmgA    LB149   -       COG0406G        phosphoglycerate mutase
153
 
144510..145457  -       315     24217211        cbiB    LB150   -       COG1270H        cobalamin biosynthesis protein B
154
 
145461..146933  -       490     24217212        cbiP    LB151   -       COG1492H        cobyric acid synthase
155
 
148052..148672  -       206     24217213        cobP    LB152   -       COG2087H        cobinamide kinase
156
 
148612..149349  -       245     24217214        -       LB153   -       COG1865S        hypothetical protein
157
 
149292..150656  -       454     24217215        cbiA    LB154   -       COG1797H        cobyrinic acid-diamide synthase
158
 
150656..151192  -       178     24217216        cobA    LB155   -       COG2109H        cob(I)alamin adenosyltransferase
159
 
151189..151953  -       254     24217217        cbiF    LB156   -       COG2875H        precorrin-3 methylase
160
 
151967..153460  -       497     24217218        cbiH    LB157   -       COG1010H        precorrin methylase
161
 
153457..154614  -       385     24217219        cbiG    LB158   -       COG2073H        cobalamin biosynthesis protein
162
 
154601..155365  -       254     24217220        cobI    LB159   -       COG2243H        precorrin-2 methyltransferase
163
 
155362..156597  -       411     24217221        cbiE    LB160   -       COG2241H,COG2242H       precorrin-6Y methylase
164
 
156594..157265  -       223     24217222        cbiC    LB161   -       -       cobalamin biosynthesis precorrin isomerase
165
 
157262..158365  -       367     24217223        cbiD    LB162   -       -       cobalt-precorrin-6A synthase
166
 
158369..159118  -       249     24217224        -       LB163   -       COG1018C        Oxidoreductase FAD-binding family protein
167
 
159124..159495  -       123     24217225        -       LB164   -       -       unknown protein confirmed by proteomics
168
 
159516..160685  -       389     24217226        cbiX    LB165   -       COG2138S,COG3411C       putative cbiX protein
169
 
161652..161771  +       39      24217227        -       LB166   -       -       hypothetical protein
170
 
162903..163043  -       46      24217228        -       LB168   -       -       hypothetical protein
171
 
163042..165165  +       707     24217229        -       LB167   -       -       hypothetical protein
172
 
165171..165743  -       190     24217230        -       LB169   -       -       hypothetical protein
173
 
165785..167674  +       629     24217231        -       LB170   -       COG1086MG       similar to capsular polysaccharide biosynthesis protein
174
 
167667..168137  +       156     24217232        -       LB171   -       -       hypothetical protein
175
 
168134..169744  +       536     24217233        -       LB172   -       COG2252R        hypothetical protein
176
 
169746..169901  +       51      24217234        -       LB173   -       -       hypothetical protein
177
 
170186..171073  +       295     24217235        htpX    LB174   -       COG0501O        heat shock protein HtpX
178
 
171180..171356  -       58      24217236        -       LB175   -       -       hypothetical protein
179
 
171595..172128  +       177     24217237        -       LB176   -       COG0503F        adenine phosphoribosyltransferase
180
 
172166..173680  +       504     24217238        -       LB177   -       COG0265O        putative serine protease
181
 
173695..175278  +       527     24217239        -       LB178   -       COG0265O        putative serine protease
182
 
175702..175815  -       37      24217240        -       LB179   -       -       hypothetical protein
183
 
175960..176091  -       43      24217241        -       LB180   -       -       hypothetical protein
184
 
176650..177882  -       410     24217242        -       LB181   -       -       hypothetical protein
185
 
177879..179456  -       525     24217243        -       LB182   -       -       hypothetical protein
186
 
179453..179845  -       130     24217244        -       LB183   -       COG0735P        transcriptional regulator (Fur family)
187
 
180591..180731  -       46      24217245        -       LB184   -       -       hypothetical protein
188
 
181088..181198  -       36      24217246        -       LB185   -       -       hypothetical protein
189
 
181530..182207  +       225     24217247        -       LB186   -       COG5398P        heme oxygenase
190
 
182182..183390  +       402     24217248        -       LB187   -       -       hypothetical protein
191
 
183377..183514  -       45      24217249        -       LB188   -       -       hypothetical protein
192
 
183575..184105  -       176     24217250        -       LB190   -       -       hypothetical protein
193
 
184098..184205  +       35      24217251        -       LB189   -       -       hypothetical protein
194
 
184996..187128  -       710     24217252        -       LB191   -       COG4771P,COG1629P       putative TonB-dependent outer membrane receptor protein
195
 
187107..187517  -       136     24217253        -       LB192   -       -       hypothetical protein
196
 
187719..187829  +       36      24217254        -       LB193   -       -       hypothetical protein
197
 
187833..188411  -       192     24217255        -       LB194   -       -       unknown protein confirmed by proteomics
198
 
188742..188870  +       42      24217256        -       LB195   -       -       hypothetical protein
199
 
189081..189608  +       175     24217257        -       LB196   -       -       putative LRR repeat family protein
200
 
189621..190394  -       257     24217258        -       LB197   -       -       hypothetical protein
201
 
190812..191117  -       101     24217259        -       LB198   -       COG0718S        hypothetical protein
202
 
191222..192577  -       451     24217260        -       LB199   -       -       putative outermembrane protein
203
 
192685..192810  -       41      24217261        -       LB200   -       -       hypothetical protein
204
 
192835..194457  -       540     24217262        lonA    LB201   -       COG1067O        putative ATP-dependent protease LA
205
 
194483..195541  -       352     24217263        -       LB202   -       -       queuosine biosynthesis protein
206
 
195737..197182  +       481     24217264        -       LB203   -       -       hypothetical protein
207
 
197202..198344  +       380     24217265        mtfA    LB204   -       COG0438M        mannosyltransferase A
208
 
198307..198921  +       204     24217266        -       LB205   -       -       hypothetical protein
209
 
199150..199296  +       48      24217267        -       LB206   -       -       hypothetical protein
210
 
199351..200739  +       462     24217268        -       LB207   -       -       hypothetical protein
211
 
200811..202223  +       470     24217269        -       LB208   -       COG1696M        alginate o-acetyltransferase
212
 
202238..203398  +       386     24217270        -       LB209   -       -       hypothetical protein
213
 
203395..204792  +       465     24217271        -       LB210   -       COG1696M        alginate o-acetyltransferase
214
 
204799..205869  +       356     24217272        -       LB211   -       -       hypothetical protein
215
 
205866..206210  +       114     24217273        -       LB212   -       COG1694R        hypothetical protein
216
 
206966..207379  -       137     24217274        exbD2   LB213   -       COG0848U        putative biopolymer transport protein
217
 
207376..207903  -       175     24217275        -       LB214   -       COG0811U        MotA/ExbB proton channel family protein
218
 
208518..209267  +       249     24217276        ubiE    LB215   -       COG2226H        ubiquinone/menaquinone biosynthesis methlytransferase
219
 
209350..211110  +       586     24217277        -       LB216   -       -       hypothetical protein
220
 
211107..211502  +       131     24217278        -       LB217   -       -       hypothetical protein
221
 
211547..212938  +       463     24217279        -       LB218   -       COG2339S        hypothetical protein
222
 
212921..213655  -       244     24217280        -       LB219   -       -       hypothetical protein
223
 
213749..214984  -       411     24217281        -       LB220   -       -       hypothetical protein
224
 
215512..215634  +       40      24217282        -       LB221   -       -       hypothetical protein
225
 
216332..216784  -       150     24217283        -       LB222   -       COG1734T        hypothetical protein
226
 
217221..218072  -       283     24217284        -       LB223   -       COG2801L        putative transposase
227
 
218069..218374  -       101     24217285        -       LB224   -       COG2963L        putative transposase
228
 
219779..222361  +       860     24217286        -       LB225   -       -       hypothetical protein
229
 
222462..222995  +       177     24217287        -       LB226   -       -       Fimh-like protein
230
 
224010..224129  +       39      24217288        -       LB227   -       -       hypothetical protein
231
 
224104..225336  +       410     24217289        -       LB228   -       -       Putative AraC-type Regulator
232
 
225796..225906  -       36      24217290        -       LB229   -       -       hypothetical protein
233
 
226283..226582  +       99      24217291        -       LB230   -       COG2963L        putative transposase
234
 
226579..227424  +       281     24217292        -       LB231   -       COG2801L        putative transposase
235
 
228469..228888  -       139     24217293        -       LB232   -       -       hypothetical protein
236
 
229573..229791  -       72      24217294        -       LB233   -       -       hypothetical protein
237
 
229900..230004  -       34      24217295        -       LB234   -       -       hypothetical protein
238
 
230358..232076  -       572     24217296        -       LB235   -       COG5001T        probable protein contain EAL family signaling protein
239
 
232421..232525  -       34      24217297        -       LB236   -       -       hypothetical protein
240
 
232542..233129  -       195     24217298        -       LB237   -       -       GGDEF family protein
241
 
233172..234227  -       351     24217299        -       LB238   -       -       putative CACHE family protein
242
 
234316..234507  +       63      24217300        -       LB239   -       -       hypothetical protein
243
 
234521..236095  -       524     24217301        -       LB240   -       -       GGDEF family protein
244
 
236543..239152  +       869     24217302        -       LB241   -       COG0642T        two-component hybrid sensor and regulator
245
 
239627..240328  -       233     24217303        -       LB242   -       -       hypothetical protein
246
 
240371..240778  -       135     24217304        -       LB243   -       -       hypothetical protein
247
 
241061..242065  -       334     24217305        -       LB244   -       -       hypothetical protein
248
 
242934..244322  -       462     24217306        -       LB245   -       COG0591ER       probable sodium:solute symporter
249
 
244678..244803  -       41      24217307        -       LB246   -       -       hypothetical protein
250
 
245062..245250  -       62      24217308        -       LB247   -       -       hypothetical protein
251
 
245365..246822  +       485     24217309        -       LB248   -       -       hypothetical protein
252
 
246884..246997  -       37      24217310        -       LB249   -       -       hypothetical protein
253
 
247072..247353  -       93      24217311        -       LB250   -       -       hypothetical protein
254
 
247350..249314  -       654     24217312        -       LB251   -       -       hypothetical protein
255
 
249442..250320  -       292     24217313        -       LB252   -       COG1752R        hypothetical protein
256
 
250333..250566  -       77      24217314        -       LB253   -       -       hypothetical protein
257
 
250911..252125  -       404     24217315        -       LB254   -       COG2814G        putative sugar transport protein
258
 
252638..253927  +       429     24217316        -       LB255   -       COG0427C        4-Hydroxybutyrate CoA-transferase
259
 
253999..254133  +       44      24217317        -       LB256   -       -       hypothetical protein
260
 
254196..254714  +       172     24217318        -       LB257   -       -       hypothetical protein
261
 
254727..257126  +       799     24217319        -       LB258   -       COG4870O        Cysteine protease
262
 
257127..257249  +       40      24217320        -       LB259   -       -       hypothetical protein
263
 
257596..257706  -       36      24217321        -       LB260   -       -       hypothetical protein
264
 
257787..259139  -       450     24217322        -       LB261   -       -       hypothetical protein
265
 
259245..260663  -       472     24217323        galF    LB262   -       -       UDP-glucose pyrophosphorylase
266
 
260651..261100  -       149     24217324        -       LB263   -       -       hypothetical protein
267
 
261110..262027  +       305     24217325        -       LB264   -       -       hypothetical protein
268
 
262747..263928  +       393     24217326        -       LB265   -       COG0596R        hypothetical protein
269
 
264495..265445  -       316     24217327        -       LB266   -       COG0385R        hypothetical protein
270
 
266337..267488  -       383     24217328        -       LB267   -       COG0520E        aminotransferase
271
 
267499..268368  -       289     24217329        -       LB268   -       COG1633S        hypothetical protein
272
 
268431..269057  -       208     24217330        -       LB269   -       COG3714S        hypothetical protein
273
 
269054..269176  -       40      24217331        -       LB270   -       -       hypothetical protein
274
 
269322..269507  +       61      24217332        -       LB271   -       COG0861P        hypothetical protein
275
 
269486..270124  +       212     24217333        -       LB272   -       COG0861P        hypothetical protein
276
 
270216..272096  +       626     24217334        mcm2    LB273   -       COG2185I        methylmalonyl-CoA mutase
277
 
272093..274291  +       732     24217335        mcm3    LB274   -       COG2185I        methylmalonyl-CoA mutase
278
 
274304..275359  +       351     24217336        argK    LB275   -       COG1703E        arginine/ornithine transport system ATPase
279
 
276450..276827  +       125     24217337        -       LB276   -       -       hypothetical protein
280
 
276984..277673  +       229     24217338        -       LB277   -       -       hypothetical protein
281
 
277675..278124  +       149     24217339        -       LB278   -       -       hypothetical protein
282
 
278133..280793  +       886     24217340        -       LB279   -       -       hypothetical protein
283
 
280793..281308  +       171     24217341        -       LB280   -       -       hypothetical protein
284
 
281387..282001  +       204     24217342        exbB    LB281   -       COG0811U        transport protein ExbB
285
 
282091..282495  +       134     24217343        exbD3   LB282   -       COG0848U        transport protein ExbD
286
 
282505..283155  +       216     24217344        -       LB283   -       COG0810M        TonB protein
287
 
284176..284292  +       38      24217345        -       LB284   -       -       hypothetical protein
288
 
284338..285132  +       264     24217346        -       LB285   -       COG2908S        hypothetical protein
289
 
285144..286796  +       550     24217347        gltB2   LB286   -       COG0069E        glutamate synthase
290
 
287132..287860  +       242     24217348        -       LB287   -       -       hypothetical protein
291
 
287857..288297  +       146     24217349        -       LB288   -       COG0824R        hypothetical protein
292
 
288431..288862  +       143     24217350        -       LB289   -       -       hypothetical protein
293
 
289090..291633  +       847     24217351        -       LB290   -       COG0642T,COG2202T       two-component hybrid sensor and regulator
294
 
291637..292335  -       232     24217352        -       LB291   -       COG1028IQR      3-oxoacyl-[acyl-carrier protein] reductase
295
 
292348..293097  -       249     24217353        -       LB292   -       COG0235G        probable sugar aldolase
296
 
293099..293632  -       177     24217354        -       LB293   -       COG1791S        probable ARD family methionine salvage pathway enzyme
297
 
293655..294371  -       238     24217355        -       LB294   -       COG0231J        elongation factor P
298
 
294557..295630  +       357     24217356        -       LB295   -       COG3547L        putative transposase
299
 
296868..297005  +       45      24217357        -       LB296   -       -       hypothetical protein
300
 
297444..298343  +       299     24217358        pstS    LB297   -       COG0226P        phosphate-binding protein PstS
301
 
298418..299515  +       365     24217359        -       LB298   -       COG1509E        L-lysine 2,3-aminomutase
302
 
299490..300128  +       212     24217360        -       LB299   -       -       receptor tyrosine kinase
303
 
300168..300389  +       73      24217361        -       LB300   -       -       hypothetical protein
304
 
300382..301155  +       257     24217362        -       LB301   -       -       hypothetical protein
305
 
301358..301474  -       38      24217363        -       LB302   -       -       hypothetical protein
306
 
301790..302635  -       281     24217364        -       LB303   -       COG2801L        putative transposase
307
 
302632..302937  -       101     24217365        -       LB304   -       -       putative transposase
308
 
303419..303913  -       164     24217366        -       LB305   -       COG3216S        hypothetical protein
309
 
304190..304294  -       34      24217367        -       LB306   -       -       hypothetical protein
310
 
304360..304818  -       152     24217368        -       LB307   -       COG1238S        hypothetical protein
311
 
304824..304964  -       46      24217369        -       LB308   -       -       hypothetical protein
312
 
305503..306762  +       419     24217370        -       LB309   -       -       similar to Fimh-like protein
313
 
306995..307822  -       275     24217371        pyrF    LB310   -       COG0284F        orotidine-5'-monophosphate decarboxylase
314
 
307834..308679  -       281     24217372        speE2   LB311   -       COG0421E        spermidine synthase
315
 
308686..309552  -       288     24217373        -       LB312   -       -       hypothetical protein
316
 
309558..309662  -       34      24217374        -       LB314   -       -       hypothetical protein
317
 
309639..309782  +       47      24217375        -       LB313   -       -       hypothetical protein
318
 
310349..310483  +       44      24217376        -       LB315   -       -       hypothetical protein
319
 
310505..311047  -       180     24217377        -       LB316   -       -       unknown protein confirmed by proteomics
320
 
311077..312246  +       389     24217378        -       LB317   -       COG0787M        alanine racemase
321
 
312297..313442  +       381     24217379        -       LB318   -       -       hypothetical protein
322
 
313463..314374  +       303     24217380        -       LB319   -       -       hypothetical protein
323
 
314371..315162  +       263     24217381        -       LB320   -       -       hypothetical protein
324
 
316118..316777  -       219     24217382        -       LB321   -       -       hypothetical protein
325
 
316778..319093  -       771     24217383        -       LB322   -       COG0642T        two-component hybrid sensor and regulator
326
 
319149..319766  +       205     24217384        -       LB323   -       COG0741M        lytic transglycosylase
327
 
319842..319994  -       50      24217385        -       LB324   -       -       hypothetical protein
328
 
320145..320873  +       242     24217386        -       LB325   -       COG1309K        transcriptional regulator, TetR family
329
 
321371..321490  +       39      24217387        -       LB326   -       -       hypothetical protein
330
 
321518..323791  -       757     24217388        acn     LB327   -       COG1048C        aconitate hydratase
331
 
324060..325211  -       383     24217389        ompA    LB328   -       COG1360N,COG2885M       outer membrane protein OmpA
332
 
325387..326403  -       338     24217390        lysS2   LB329   -       COG2269J        lysyl-tRNA synthetase
333
 
326504..326608  -       34      24217391        -       LB331   -       -       hypothetical protein
334
 
326607..326936  +       109     24217392        -       LB330   -       -       hypothetical protein
335
 
327256..327666  -       136     24217393        -       LB332   -       -       hypothetical protein
336
 
327874..328605  +       243     24217394        -       LB333   -       COG0745TK       two-component response regulator
337
 
329173..329832  -       219     24217395        -       LB334   -       -       hypothetical protein
338
 
329835..330245  -       136     24217396        phhB    LB335   -       -       pterin-4-alpha-carbinolamine dehydratase
339
 
330224..330352  -       42      24217397        -       LB336   -       -       hypothetical protein
340
 
330565..331380  +       271     24217398        -       LB337   -       -       hypothetical protein
341
 
331365..331493  +       42      24217399        -       LB338   -       -       hypothetical protein
342
 
331510..331692  +       60      24217400        -       LB339   -       -       hypothetical protein
343
 
332599..333030  -       143     24217401        -       LB340   -       -       hypothetical protein
344
 
333122..333505  +       127     24217402        -       LB341   -       -       hypothetical protein
345
 
333502..333771  +       89      24217403        -       LB342   -       -       hypothetical protein
346
 
333876..334343  +       155     24217404        -       LB343   -       -       cytochrome-c oxidase chain III
347
 
334727..334846  -       39      24217405        -       LB344   -       -       hypothetical protein
348
 
334894..335967  -       357     24217406        -       LB345   -       COG3547L        putative transposase
349
 
336410..336715  +       101     24217407        -       LB346   -       COG2963L        putative transposase
350
 
337384..337512  +       42      24217408        -       LB347   -       -       hypothetical protein
351
 
337515..337955  +       146     24217409        -       LB348   -       -       hypothetical protein
352
 
338085..338201  +       38      24217410        -       LB349   -       -       hypothetical protein
353
 
339199..339609  -       136     24217411        -       LB350   -       -       hypothetical protein
354
 
339811..340188  -       125     24217412        -       LB351   -       -       putative outermembrane protein
355
 
340238..340336  -       32      24217413        -       LB352   -       -       unknown protein confirmed by proteomics
356
 
340442..341902  -       486     24217414        pyk2    LB353   -       -       pyruvate kinase
357
 
341941..343902  -       653     24217415        -       LB354   -       -       hypothetical protein
358
 
343915..344964  -       349     24217416        asd     LB355   -       COG0136E        aspartate-semialdehyde dehydrogenase
359
 
345016..346608  -       530     24217417        -       LB356   -       -       hypothetical protein
360
 
346596..346715  -       39      24217418        -       LB357   -       -       hypothetical protein
361
 
347158..348723  +       521     24217419        -       LB358   -       -       hypothetical protein
362
 
348694..350157  -       487     24217420        -       LB359   -       COG1696M        alginate O-acetylation protein
363
 
350989..351204  -       71      24217421        -       LB360   -       -       hypothetical protein
364
 
351865..352251  -       128     24217422        -       LB361   -       -       hypothetical protein
365
 
352294..353268  -       324     24217423        -       LB362   -       -       hypothetical protein
366
 
353351..354448  -       365     24217424        -       LB363   -       -       hypothetical protein
367
 
354363..355733  -       456     24217425        -       LB364   -       COG2204T        transcriptional regulator (FIS family)
368
 
355978..356730  +       250     24217426        parA4   LB365   -       COG1192D        ParA protein
369
 
356714..357559  +       281     24217427        parB4   LB366   -       COG1475K        ParB family protein
370
 
357993..358931  +       312     24217428        -       LB367   -       -       hypothetical protein