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  • Committer: Bazaar Package Importer
  • Author(s): Charles Plessy
  • Date: 2009-03-10 07:19:11 UTC
  • mfrom: (1.2.3 upstream)
  • Revision ID: james.westby@ubuntu.com-20090310071911-fukqzw54pyb1f0bd
Tags: 1.6.0-2
https://launchpad.net/bugs/324001
* Removed patch system (not used):
  - removed instuctions in debian/rules;
  - removed quilt from Build-Depends in debian/control.
* Re-enabled tests:
  - uncommented test command in debian/rules;
  - uncommented previously missing build-dependencies in debian/control.
  - Re-enabled tests and uncommented build-dependencies accordingly.
* Removed libmodule-build-perl and libtest-harness-perl from
  Build-Depends-Indep (provided by perl-modules).
* Better cleaning of empty directories using find -type d -empty -delete
  instead of rmdir in debian/rules (LP: #324001).

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scripts/seq/seqconvert.PLS
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#!perl -w
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# $Id: seqconvert.PLS,v 1.8 2006/07/04 22:23:29 mauricio Exp $
 
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# $Id: seqconvert.PLS 15088 2008-12-04 02:49:09Z bosborne $
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use strict;
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use Getopt::Long;
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  qw(gcg fasta ace raw fastq phd pir scf swiss genbank locuslink
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     embl game qual bsml tab raw abi chado alf ctf exp ztr pln
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     chaosxml chadoxml yaml tigr tigrxml agave chaos kegg interpro
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     lasergene strider);
 
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     lasergene strider gbdriver embldriver swissdriver);
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my $script=substr($0, 1+rindex($0,'/'));
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my $usage="Usage: