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Viewing changes to qiime_test_data/pick_open_reference_otus/ucrss_iter/0/step1_otus/prefiltered_seqs1_clusters.uc

  • Committer: Package Import Robot
  • Author(s): Andreas Tille
  • Date: 2013-06-17 18:28:26 UTC
  • mfrom: (9.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20130617182826-376az5ad080a0sfe
Tags: 1.7.0+dfsg-1
Upload preparations done for BioLinux to Debian

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qiime_test_data/pick_open_reference_otus/ucrss_iter/0/step1_otus/prefiltered_seqs1_clusters.uc
 
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# uclust --maxrejects 500 --input /Users/caporaso/temp/UclustExactMatchFilterMkl1fAnvmWCOLiGUwPDh.fasta --id 0.97 --w 12 --stepwords 20 --rev --usersort --maxaccepts 20 --libonly --stable_sort --lib /Users/caporaso/code/Qiime/qiime_test_data/pick_open_reference_otus/refseqs.fna --uc /Users/caporaso/code/Qiime/qiime_test_data/pick_open_reference_otus/ucrss_iter//0//step1_otus/prefiltered_seqs1_clusters.uc
 
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# version=1.2.22
 
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# Tab-separated fields:
 
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# 1=Type, 2=ClusterNr, 3=SeqLength or ClusterSize, 4=PctId, 5=Strand, 6=QueryStart, 7=SeedStart, 8=Alignment, 9=QueryLabel, 10=TargetLabel
 
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# Record types (field 1): L=LibSeed, S=NewSeed, H=Hit, R=Reject, D=LibCluster, C=NewCluster, N=NoHit
 
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# For C and D types, PctId is average id with seed.
 
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# QueryStart and SeedStart are zero-based relative to start of sequence.
 
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# If minus strand, SeedStart is relative to reverse-complemented seed.
 
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L       3       1389    *       *       *       *       *       295053  *
 
10
H       3       133     100.0   +       0       0       519I133M737I    QiimeExactMatch.f2_1539 295053
 
11
L       4       1371    *       *       *       *       *       879972  *
 
12
H       4       128     100.0   +       0       0       515I128M728I    QiimeExactMatch.p1_27798        879972
 
13
N       *       126     *       *       *       *       *       QiimeExactMatch.p2_33176        *
 
14
H       3       141     100.0   +       0       0       519I141M729I    QiimeExactMatch.f2_8835 295053
 
15
N       *       152     *       *       *       *       *       QiimeExactMatch.f1_4866 *
 
16
N       *       137     *       *       *       *       *       QiimeExactMatch.p2_35810        *
 
17
N       *       141     *       *       *       *       *       QiimeExactMatch.t2_52671        *
 
18
N       *       120     *       *       *       *       *       QiimeExactMatch.t1_53176        *
 
19
N       *       143     *       *       *       *       *       QiimeExactMatch.t1_53967        *
 
20
H       4       133     98.5    +       0       0       515I133M723I    QiimeExactMatch.p1_30198        879972
 
21
H       3       128     100.0   +       0       0       519I128M742I    QiimeExactMatch.f2_1271 295053
 
22
N       *       121     *       *       *       *       *       QiimeExactMatch.t1_56191        *
 
23
N       *       118     *       *       *       *       *       QiimeExactMatch.t1_52964        *
 
24
H       4       122     100.0   +       0       0       515I122M734I    QiimeExactMatch.p2_30113        879972
 
25
H       4       116     100.0   +       0       0       515I116M740I    QiimeExactMatch.t2_53764        879972
 
26
H       3       143     100.0   +       0       0       519I143M727I    QiimeExactMatch.f1_14665        295053
 
27
N       *       140     *       *       *       *       *       QiimeExactMatch.t1_53329        *
 
28
N       *       132     *       *       *       *       *       QiimeExactMatch.t2_52739        *
 
29
N       *       128     *       *       *       *       *       QiimeExactMatch.t2_53194        *
 
30
N       *       116     *       *       *       *       *       QiimeExactMatch.t1_54144        *
 
31
N       *       152     *       *       *       *       *       QiimeExactMatch.f1_8307 *
 
32
N       *       119     *       *       *       *       *       QiimeExactMatch.p1_36300        *
 
33
N       *       133     *       *       *       *       *       QiimeExactMatch.t1_53038        *
 
34
H       4       137     98.5    +       0       0       515I137M719I    QiimeExactMatch.p2_34773        879972
 
35
H       4       126     100.0   +       0       0       515I126M730I    QiimeExactMatch.t2_53719        879972
 
36
L       1       1501    *       *       *       *       *       42684   *
 
37
H       1       116     100.0   +       0       0       526I116M859I    QiimeExactMatch.p2_30549        42684
 
38
N       *       152     *       *       *       *       *       QiimeExactMatch.f2_4913 *
 
39
N       *       131     *       *       *       *       *       QiimeExactMatch.p2_32628        *
 
40
N       *       152     *       *       *       *       *       QiimeExactMatch.p1_38017        *
 
41
N       *       128     *       *       *       *       *       QiimeExactMatch.p2_36441        *
 
42
H       3       133     99.2    +       0       0       519I133M737I    QiimeExactMatch.p2_34392        295053
 
43
H       3       138     100.0   +       0       0       519I138M732I    QiimeExactMatch.p2_39175        295053
 
44
H       3       134     100.0   +       0       0       519I134M736I    QiimeExactMatch.p2_31615        295053
 
45
H       3       120     100.0   +       0       0       519I120M750I    QiimeExactMatch.p2_35617        295053
 
46
N       *       140     *       *       *       *       *       QiimeExactMatch.f2_10228        *
 
47
N       *       131     *       *       *       *       *       QiimeExactMatch.p2_33268        *
 
48
N       *       143     *       *       *       *       *       QiimeExactMatch.t2_55465        *
 
49
N       *       139     *       *       *       *       *       QiimeExactMatch.p2_35125        *
 
50
N       *       136     *       *       *       *       *       QiimeExactMatch.p2_31582        *
 
51
D       1       2       *       *       *       *       100.0   42684   *
 
52
D       3       9       *       *       *       *       99.9    295053  *
 
53
D       4       7       *       *       *       *       99.5    879972  *