← Back to branch summary

~ubuntu-branches/ubuntu/trusty/qiime/trusty

« back to all changes in this revision

Viewing changes to qiime_test_data/pick_open_reference_otus/ucrss_iter_no_tree/1/step4_otus/failures_failures_clusters.uc

  • Committer: Package Import Robot
  • Author(s): Andreas Tille
  • Date: 2013-06-17 18:28:26 UTC
  • mfrom: (9.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20130617182826-376az5ad080a0sfe
Tags: 1.7.0+dfsg-1
Upload preparations done for BioLinux to Debian

Show diffs side-by-side

added added

removed removed

Lines of Context:
qiime_test_data/pick_open_reference_otus/ucrss_iter_no_tree/1/step4_otus/failures_failures_clusters.uc
 
1
# uclust --maxrejects 500 --input /Users/caporaso/temp/UclustExactMatchFilter0zG6uLw4xBdUpvGG40sY.fasta --id 0.97 --w 12 --stepwords 20 --rev --usersort --maxaccepts 20 --stable_sort --uc /Users/caporaso/code/Qiime/qiime_test_data/pick_open_reference_otus/ucrss_iter_no_tree//1//step4_otus/failures_failures_clusters.uc
 
2
# version=1.2.22
 
3
# Tab-separated fields:
 
4
# 1=Type, 2=ClusterNr, 3=SeqLength or ClusterSize, 4=PctId, 5=Strand, 6=QueryStart, 7=SeedStart, 8=Alignment, 9=QueryLabel, 10=TargetLabel
 
5
# Record types (field 1): L=LibSeed, S=NewSeed, H=Hit, R=Reject, D=LibCluster, C=NewCluster, N=NoHit
 
6
# For C and D types, PctId is average id with seed.
 
7
# QueryStart and SeedStart are zero-based relative to start of sequence.
 
8
# If minus strand, SeedStart is relative to reverse-complemented seed.