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Viewing changes to qiime_test_data/pick_open_reference_otus/ucrss_usearch/pynast_aligned_seqs/rep_set_log.txt

  • Committer: Package Import Robot
  • Author(s): Andreas Tille
  • Date: 2013-06-17 18:28:26 UTC
  • mfrom: (9.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20130617182826-376az5ad080a0sfe
Tags: 1.7.0+dfsg-1
Upload preparations done for BioLinux to Debian

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qiime_test_data/pick_open_reference_otus/ucrss_usearch/pynast_aligned_seqs/rep_set_log.txt
 
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candidate sequence ID   candidate nucleotide count      errors  template ID     BLAST percent identity to template      candidate nucleotide count post-NAST
 
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295053 f2_1539  133             171306  100.00  133
 
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879972 p1_27798 128             221080  98.40   128
 
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New.ReferenceOTU0 t1_53176      120             68416   95.80   120
 
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New.CleanUp.ReferenceOTU0 f1_4866       152             167734  86.20   152
 
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New.CleanUp.ReferenceOTU1 p2_35810      137             190336  100.00  137
 
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New.CleanUp.ReferenceOTU3 f2_4913       152             186883  98.70   152
 
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New.CleanUp.ReferenceOTU4 p1_38017      152             70198   96.10   152
 
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PyNastAligner parameters:
 
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Algorithm:NAST
 
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Application:PyNAST
 
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blast_db:None
 
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min_len:75
 
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min_pct:75.0
 
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pairwise_alignment_method:uclust
 
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template_filepath:/Users/caporaso/data/greengenes_core_sets/core_set_aligned_imputed.fasta_11_8_07.no_dots