← Back to branch summary

~ubuntu-branches/ubuntu/trusty/qiime/trusty

« back to all changes in this revision

Viewing changes to qiime_test_data/pick_open_reference_otus/ucrss_iter_no_tax/1/prefilter_otus/seqs2_otus.log

  • Committer: Package Import Robot
  • Author(s): Andreas Tille
  • Date: 2013-06-17 18:28:26 UTC
  • mfrom: (9.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20130617182826-376az5ad080a0sfe
Tags: 1.7.0+dfsg-1
Upload preparations done for BioLinux to Debian

Show diffs side-by-side

added added

removed removed

Lines of Context:
qiime_test_data/pick_open_reference_otus/ucrss_iter_no_tax/1/prefilter_otus/seqs2_otus.log
 
1
OtuPicker parameters:
 
2
Application:uclust
 
3
Similarity:0.6
 
4
chimeras_retention:union
 
5
enable_rev_strand_matching:True
 
6
exact:False
 
7
max_accepts:20
 
8
max_rejects:500
 
9
new_cluster_identifier:None
 
10
next_new_cluster_number:1
 
11
optimal:False
 
12
output_dir:/Users/caporaso/code/Qiime/qiime_test_data/pick_open_reference_otus/ucrss_iter_no_tax//1//prefilter_otus/
 
13
prefilter_identical_sequences:True
 
14
presort_by_abundance:True
 
15
save_uc_files:True
 
16
stable_sort:True
 
17
stepwords:20
 
18
suppress_new_clusters:True
 
19
suppress_sort:True
 
20
word_length:12
 
21
Reference seqs:/Users/caporaso/code/Qiime/qiime_test_data/pick_open_reference_otus/refseqs.fna
 
22
Num OTUs:2
 
23
Num new OTUs:0
 
24
Num failures:0
 
25
Result path: /Users/caporaso/code/Qiime/qiime_test_data/pick_open_reference_otus/ucrss_iter_no_tax//1//prefilter_otus//seqs2_otus.txt
 
 
b'\\ No newline at end of file'