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<li class="navelem"><a class="el" href="dir_e770f0cf77e550adde3f44739ef529fe.html">include</a></li><li class="navelem"><a class="el" href="dir_6a63c4937d4da007e55fff5dcf71e0f8.html">OpenMS</a></li><li class="navelem"><a class="el" href="dir_75360fe07839be189f3af6ba8820b03c.html">KERNEL</a></li> </ul>
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<div class="title">AreaIterator.h</div> </div>
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<a href="AreaIterator_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno"> 1</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
28
<div class="line"><a name="l00002"></a><span class="lineno"> 2</span> <span class="comment">// OpenMS -- Open-Source Mass Spectrometry</span></div>
29
<div class="line"><a name="l00003"></a><span class="lineno"> 3</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
30
<div class="line"><a name="l00004"></a><span class="lineno"> 4</span> <span class="comment">// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,</span></div>
31
<div class="line"><a name="l00005"></a><span class="lineno"> 5</span> <span class="comment">// ETH Zurich, and Freie Universitaet Berlin 2002-2013.</span></div>
32
<div class="line"><a name="l00006"></a><span class="lineno"> 6</span> <span class="comment">//</span></div>
33
<div class="line"><a name="l00007"></a><span class="lineno"> 7</span> <span class="comment">// This software is released under a three-clause BSD license:</span></div>
34
<div class="line"><a name="l00008"></a><span class="lineno"> 8</span> <span class="comment">// * Redistributions of source code must retain the above copyright</span></div>
35
<div class="line"><a name="l00009"></a><span class="lineno"> 9</span> <span class="comment">// notice, this list of conditions and the following disclaimer.</span></div>
36
<div class="line"><a name="l00010"></a><span class="lineno"> 10</span> <span class="comment">// * Redistributions in binary form must reproduce the above copyright</span></div>
37
<div class="line"><a name="l00011"></a><span class="lineno"> 11</span> <span class="comment">// notice, this list of conditions and the following disclaimer in the</span></div>
38
<div class="line"><a name="l00012"></a><span class="lineno"> 12</span> <span class="comment">// documentation and/or other materials provided with the distribution.</span></div>
39
<div class="line"><a name="l00013"></a><span class="lineno"> 13</span> <span class="comment">// * Neither the name of any author or any participating institution</span></div>
40
<div class="line"><a name="l00014"></a><span class="lineno"> 14</span> <span class="comment">// may be used to endorse or promote products derived from this software</span></div>
41
<div class="line"><a name="l00015"></a><span class="lineno"> 15</span> <span class="comment">// without specific prior written permission.</span></div>
42
<div class="line"><a name="l00016"></a><span class="lineno"> 16</span> <span class="comment">// For a full list of authors, refer to the file AUTHORS.</span></div>
43
<div class="line"><a name="l00017"></a><span class="lineno"> 17</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
44
<div class="line"><a name="l00018"></a><span class="lineno"> 18</span> <span class="comment">// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"</span></div>
45
<div class="line"><a name="l00019"></a><span class="lineno"> 19</span> <span class="comment">// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE</span></div>
46
<div class="line"><a name="l00020"></a><span class="lineno"> 20</span> <span class="comment">// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE</span></div>
47
<div class="line"><a name="l00021"></a><span class="lineno"> 21</span> <span class="comment">// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING</span></div>
48
<div class="line"><a name="l00022"></a><span class="lineno"> 22</span> <span class="comment">// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,</span></div>
49
<div class="line"><a name="l00023"></a><span class="lineno"> 23</span> <span class="comment">// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,</span></div>
50
<div class="line"><a name="l00024"></a><span class="lineno"> 24</span> <span class="comment">// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;</span></div>
51
<div class="line"><a name="l00025"></a><span class="lineno"> 25</span> <span class="comment">// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,</span></div>
52
<div class="line"><a name="l00026"></a><span class="lineno"> 26</span> <span class="comment">// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR</span></div>
53
<div class="line"><a name="l00027"></a><span class="lineno"> 27</span> <span class="comment">// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF</span></div>
54
<div class="line"><a name="l00028"></a><span class="lineno"> 28</span> <span class="comment">// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.</span></div>
55
<div class="line"><a name="l00029"></a><span class="lineno"> 29</span> <span class="comment">//</span></div>
56
<div class="line"><a name="l00030"></a><span class="lineno"> 30</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
57
<div class="line"><a name="l00031"></a><span class="lineno"> 31</span> <span class="comment">// $Maintainer: Stephan Aiche$</span></div>
58
<div class="line"><a name="l00032"></a><span class="lineno"> 32</span> <span class="comment">// $Authors: Marc Sturm $</span></div>
59
<div class="line"><a name="l00033"></a><span class="lineno"> 33</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
60
<div class="line"><a name="l00034"></a><span class="lineno"> 34</span> </div>
61
<div class="line"><a name="l00035"></a><span class="lineno"> 35</span> <span class="preprocessor">#ifndef OPENMS_KERNEL_AREAITERATOR_H</span></div>
62
<div class="line"><a name="l00036"></a><span class="lineno"> 36</span> <span class="preprocessor"></span><span class="preprocessor">#define OPENMS_KERNEL_AREAITERATOR_H</span></div>
63
<div class="line"><a name="l00037"></a><span class="lineno"> 37</span> <span class="preprocessor"></span></div>
64
<div class="line"><a name="l00038"></a><span class="lineno"> 38</span> <span class="comment">// OpenMS includes</span></div>
65
<div class="line"><a name="l00039"></a><span class="lineno"> 39</span> <span class="preprocessor">#include <<a class="code" href="Types_8h.html">OpenMS/CONCEPT/Types.h</a>></span></div>
66
<div class="line"><a name="l00040"></a><span class="lineno"> 40</span> <span class="preprocessor">#include <<a class="code" href="PeakIndex_8h.html">OpenMS/KERNEL/PeakIndex.h</a>></span></div>
67
<div class="line"><a name="l00041"></a><span class="lineno"> 41</span> </div>
68
<div class="line"><a name="l00042"></a><span class="lineno"> 42</span> <span class="comment">// STL includes</span></div>
69
<div class="line"><a name="l00043"></a><span class="lineno"> 43</span> <span class="preprocessor">#include <iterator></span></div>
70
<div class="line"><a name="l00044"></a><span class="lineno"> 44</span> </div>
71
<div class="line"><a name="l00045"></a><span class="lineno"> 45</span> <span class="keyword">namespace </span>OpenMS</div>
72
<div class="line"><a name="l00046"></a><span class="lineno"> 46</span> {</div>
73
<div class="line"><a name="l00047"></a><span class="lineno"> 47</span>  <span class="keyword">namespace </span>Internal</div>
74
<div class="line"><a name="l00048"></a><span class="lineno"> 48</span>  {</div>
75
<div class="line"><a name="l00057"></a><span class="lineno"> 57</span>  <span class="keyword">template</span> <<span class="keyword">class</span> ValueT, <span class="keyword">class</span> ReferenceT, <span class="keyword">class</span> Po<span class="keywordtype">int</span>erT, <span class="keyword">class</span> SpectrumIteratorT, <span class="keyword">class</span> PeakIteratorT></div>
76
<div class="line"><a name="l00058"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html"> 58</a></span>  <span class="keyword">class </span><a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html">AreaIterator</a> :</div>
77
<div class="line"><a name="l00059"></a><span class="lineno"> 59</span>  <span class="keyword">public</span> std::iterator<std::forward_iterator_tag, ValueT></div>
78
<div class="line"><a name="l00060"></a><span class="lineno"> 60</span>  {</div>
79
<div class="line"><a name="l00061"></a><span class="lineno"> 61</span> <span class="keyword">public</span>:</div>
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<div class="line"><a name="l00062"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a063d40a3528749f1a905ab04d76387e0"> 62</a></span>  <span class="keyword">typedef</span> <a class="code" href="classdouble.html">DoubleReal</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a063d40a3528749f1a905ab04d76387e0">CoordinateType</a>;</div>
81
<div class="line"><a name="l00063"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ad01d706f431cfcb74b2c1bce6e12c840"> 63</a></span>  <span class="keyword">typedef</span> ValueT <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ad01d706f431cfcb74b2c1bce6e12c840">PeakType</a>;</div>
82
<div class="line"><a name="l00064"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#adc79310c076ece0c5b1dc84e0d7c8a0c"> 64</a></span>  <span class="keyword">typedef</span> SpectrumIteratorT <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#adc79310c076ece0c5b1dc84e0d7c8a0c">SpectrumIteratorType</a>;</div>
83
<div class="line"><a name="l00065"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8d96a7aab759beae5a0d0d678a3ddfbc"> 65</a></span>  <span class="keyword">typedef</span> PeakIteratorT <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8d96a7aab759beae5a0d0d678a3ddfbc">PeakIteratorType</a>;</div>
84
<div class="line"><a name="l00066"></a><span class="lineno"> 66</span> </div>
85
<div class="line"><a name="l00070"></a><span class="lineno"> 70</span>  <span class="keyword">typedef</span> ValueT <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a44f6ca289754b6a15b7d99691206e0a5">value_type</a>;</div>
86
<div class="line"><a name="l00073"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab454be3e4a0684f57fb6acb877efa01f"> 73</a></span>  <span class="keyword">typedef</span> ReferenceT <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab454be3e4a0684f57fb6acb877efa01f">reference</a>;</div>
87
<div class="line"><a name="l00075"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a2aa253eb72ecbc469c97c3996ef9fa32"> 75</a></span>  <span class="keyword">typedef</span> PointerT <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a2aa253eb72ecbc469c97c3996ef9fa32">pointer</a>;</div>
88
<div class="line"><a name="l00077"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a72e7fda76e137ddd65b57234035b6067"> 77</a></span>  <span class="keyword">typedef</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a72e7fda76e137ddd65b57234035b6067">difference_type</a>;</div>
89
<div class="line"><a name="l00079"></a><span class="lineno"> 79</span> </div>
90
<div class="line"><a name="l00081"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#adaf0598df902fefc37e9f27540c93f60"> 81</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#adaf0598df902fefc37e9f27540c93f60">AreaIterator</a>(<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#adc79310c076ece0c5b1dc84e0d7c8a0c">SpectrumIteratorType</a> first, <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#adc79310c076ece0c5b1dc84e0d7c8a0c">SpectrumIteratorType</a> begin, <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#adc79310c076ece0c5b1dc84e0d7c8a0c">SpectrumIteratorType</a> end, <a class="code" href="classdouble.html">CoordinateType</a> low_mz, <a class="code" href="classdouble.html">CoordinateType</a> high_mz) :</div>
91
<div class="line"><a name="l00082"></a><span class="lineno"> 82</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a943de052440de9aead010af821766897">first_</a>(first),</div>
92
<div class="line"><a name="l00083"></a><span class="lineno"> 83</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>(begin),</div>
93
<div class="line"><a name="l00084"></a><span class="lineno"> 84</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9">end_scan_</a>(end),</div>
94
<div class="line"><a name="l00085"></a><span class="lineno"> 85</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a343ed7f24328396b41105adc1101772b">low_mz_</a>(low_mz),</div>
95
<div class="line"><a name="l00086"></a><span class="lineno"> 86</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a3f4a99b41d968bc11c4e2b57ef3e3ba2">high_mz_</a>(high_mz),</div>
96
<div class="line"><a name="l00087"></a><span class="lineno"> 87</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>(false)</div>
97
<div class="line"><a name="l00088"></a><span class="lineno"> 88</span>  {</div>
98
<div class="line"><a name="l00089"></a><span class="lineno"> 89</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ac36eab8fd07dc1782476b9aa082eba7b">nextScan_</a>();</div>
99
<div class="line"><a name="l00090"></a><span class="lineno"> 90</span>  }</div>
100
<div class="line"><a name="l00091"></a><span class="lineno"> 91</span> </div>
101
<div class="line"><a name="l00093"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a6bdd691624377f9846f352f72dd0814d"> 93</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a6bdd691624377f9846f352f72dd0814d">AreaIterator</a>() :</div>
102
<div class="line"><a name="l00094"></a><span class="lineno"> 94</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a943de052440de9aead010af821766897">first_</a>(),</div>
103
<div class="line"><a name="l00095"></a><span class="lineno"> 95</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>(),</div>
104
<div class="line"><a name="l00096"></a><span class="lineno"> 96</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9">end_scan_</a>(),</div>
105
<div class="line"><a name="l00097"></a><span class="lineno"> 97</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a>(),</div>
106
<div class="line"><a name="l00098"></a><span class="lineno"> 98</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81">end_peak_</a>(),</div>
107
<div class="line"><a name="l00099"></a><span class="lineno"> 99</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a343ed7f24328396b41105adc1101772b">low_mz_</a>(0.0),</div>
108
<div class="line"><a name="l00100"></a><span class="lineno"> 100</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a3f4a99b41d968bc11c4e2b57ef3e3ba2">high_mz_</a>(0.0),</div>
109
<div class="line"><a name="l00101"></a><span class="lineno"> 101</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>(true)</div>
110
<div class="line"><a name="l00102"></a><span class="lineno"> 102</span>  {}</div>
111
<div class="line"><a name="l00103"></a><span class="lineno"> 103</span> </div>
112
<div class="line"><a name="l00105"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#af1369d1286e64b0a88fa32aed8d31808"> 105</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#af1369d1286e64b0a88fa32aed8d31808">~AreaIterator</a>()</div>
113
<div class="line"><a name="l00106"></a><span class="lineno"> 106</span>  {}</div>
114
<div class="line"><a name="l00107"></a><span class="lineno"> 107</span> </div>
115
<div class="line"><a name="l00109"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab879a9fb1901fe73383ba7effe49ad4c"> 109</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab879a9fb1901fe73383ba7effe49ad4c">AreaIterator</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html">AreaIterator</a> & rhs) :</div>
116
<div class="line"><a name="l00110"></a><span class="lineno"> 110</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a943de052440de9aead010af821766897">first_</a>(rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a943de052440de9aead010af821766897">first_</a>),</div>
117
<div class="line"><a name="l00111"></a><span class="lineno"> 111</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>(rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>),</div>
118
<div class="line"><a name="l00112"></a><span class="lineno"> 112</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9">end_scan_</a>(rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9">end_scan_</a>),</div>
119
<div class="line"><a name="l00113"></a><span class="lineno"> 113</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a>(rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a>),</div>
120
<div class="line"><a name="l00114"></a><span class="lineno"> 114</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81">end_peak_</a>(rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81">end_peak_</a>),</div>
121
<div class="line"><a name="l00115"></a><span class="lineno"> 115</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a343ed7f24328396b41105adc1101772b">low_mz_</a>(rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a343ed7f24328396b41105adc1101772b">low_mz_</a>),</div>
122
<div class="line"><a name="l00116"></a><span class="lineno"> 116</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a3f4a99b41d968bc11c4e2b57ef3e3ba2">high_mz_</a>(rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a3f4a99b41d968bc11c4e2b57ef3e3ba2">high_mz_</a>),</div>
123
<div class="line"><a name="l00117"></a><span class="lineno"> 117</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>(rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>)</div>
124
<div class="line"><a name="l00118"></a><span class="lineno"> 118</span>  {}</div>
125
<div class="line"><a name="l00119"></a><span class="lineno"> 119</span> </div>
126
<div class="line"><a name="l00121"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ae0fc2cf8879f8e5ff4071e9d13fdb609"> 121</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html">AreaIterator</a> & <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ae0fc2cf8879f8e5ff4071e9d13fdb609">operator=</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html">AreaIterator</a> & rhs)</div>
127
<div class="line"><a name="l00122"></a><span class="lineno"> 122</span>  {</div>
128
<div class="line"><a name="l00123"></a><span class="lineno"> 123</span>  <span class="keywordflow">if</span> (&rhs == <span class="keyword">this</span>) <span class="keywordflow">return</span> *<span class="keyword">this</span>;</div>
129
<div class="line"><a name="l00124"></a><span class="lineno"> 124</span> </div>
130
<div class="line"><a name="l00125"></a><span class="lineno"> 125</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a> = rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>;</div>
131
<div class="line"><a name="l00126"></a><span class="lineno"> 126</span>  <span class="comment">//only copy iterators, if the assigned iterator is not the end iterator</span></div>
132
<div class="line"><a name="l00127"></a><span class="lineno"> 127</span>  <span class="keywordflow">if</span> (!<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>)</div>
133
<div class="line"><a name="l00128"></a><span class="lineno"> 128</span>  {</div>
134
<div class="line"><a name="l00129"></a><span class="lineno"> 129</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a943de052440de9aead010af821766897">first_</a> = rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a943de052440de9aead010af821766897">first_</a>;</div>
135
<div class="line"><a name="l00130"></a><span class="lineno"> 130</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a> = rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>;</div>
136
<div class="line"><a name="l00131"></a><span class="lineno"> 131</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9">end_scan_</a> = rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9">end_scan_</a>;</div>
137
<div class="line"><a name="l00132"></a><span class="lineno"> 132</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a> = rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a>;</div>
138
<div class="line"><a name="l00133"></a><span class="lineno"> 133</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81">end_peak_</a> = rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81">end_peak_</a>;</div>
139
<div class="line"><a name="l00134"></a><span class="lineno"> 134</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a343ed7f24328396b41105adc1101772b">low_mz_</a> = rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a343ed7f24328396b41105adc1101772b">low_mz_</a>;</div>
140
<div class="line"><a name="l00135"></a><span class="lineno"> 135</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a3f4a99b41d968bc11c4e2b57ef3e3ba2">high_mz_</a> = rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a3f4a99b41d968bc11c4e2b57ef3e3ba2">high_mz_</a>;</div>
141
<div class="line"><a name="l00136"></a><span class="lineno"> 136</span>  }</div>
142
<div class="line"><a name="l00137"></a><span class="lineno"> 137</span> </div>
143
<div class="line"><a name="l00138"></a><span class="lineno"> 138</span>  <span class="keywordflow">return</span> *<span class="keyword">this</span>;</div>
144
<div class="line"><a name="l00139"></a><span class="lineno"> 139</span>  }</div>
145
<div class="line"><a name="l00140"></a><span class="lineno"> 140</span> </div>
146
<div class="line"><a name="l00142"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a6a0b252676cf060277557ca694d5bdab"> 142</a></span>  <span class="keywordtype">bool</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a6a0b252676cf060277557ca694d5bdab">operator==</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html">AreaIterator</a> & rhs)<span class="keyword"> const</span></div>
147
<div class="line"><a name="l00143"></a><span class="lineno"> 143</span> <span class="keyword"> </span>{</div>
148
<div class="line"><a name="l00144"></a><span class="lineno"> 144</span>  <span class="comment">//Both end iterators => equal</span></div>
149
<div class="line"><a name="l00145"></a><span class="lineno"> 145</span>  <span class="keywordflow">if</span> (<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a> && rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>) <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
150
<div class="line"><a name="l00146"></a><span class="lineno"> 146</span> </div>
151
<div class="line"><a name="l00147"></a><span class="lineno"> 147</span>  <span class="comment">//Normal and end iterator => not equal</span></div>
152
<div class="line"><a name="l00148"></a><span class="lineno"> 148</span>  <span class="keywordflow">if</span> (!<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a> && rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>) <span class="keywordflow">return</span> <span class="keyword">false</span>;</div>
153
<div class="line"><a name="l00149"></a><span class="lineno"> 149</span> </div>
154
<div class="line"><a name="l00150"></a><span class="lineno"> 150</span>  <span class="keywordflow">if</span> (<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a> && !rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>) <span class="keywordflow">return</span> <span class="keyword">false</span>;</div>
155
<div class="line"><a name="l00151"></a><span class="lineno"> 151</span> </div>
156
<div class="line"><a name="l00152"></a><span class="lineno"> 152</span>  <span class="comment">//Equality of pointed to peak adresses</span></div>
157
<div class="line"><a name="l00153"></a><span class="lineno"> 153</span>  <span class="keywordflow">return</span> &(*current_peak_) == &(*(rhs.<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a>));</div>
158
<div class="line"><a name="l00154"></a><span class="lineno"> 154</span>  }</div>
159
<div class="line"><a name="l00155"></a><span class="lineno"> 155</span> </div>
160
<div class="line"><a name="l00157"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8180bf5085746a6a4676a698e408826f"> 157</a></span>  <span class="keywordtype">bool</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8180bf5085746a6a4676a698e408826f">operator!=</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html">AreaIterator</a> & rhs)<span class="keyword"> const</span></div>
161
<div class="line"><a name="l00158"></a><span class="lineno"> 158</span> <span class="keyword"> </span>{</div>
162
<div class="line"><a name="l00159"></a><span class="lineno"> 159</span>  <span class="keywordflow">return</span> !(*<span class="keyword">this</span> == rhs);</div>
163
<div class="line"><a name="l00160"></a><span class="lineno"> 160</span>  }</div>
164
<div class="line"><a name="l00161"></a><span class="lineno"> 161</span> </div>
165
<div class="line"><a name="l00163"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a6b9e64155af15bf1b5c93473a4494e91"> 163</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html">AreaIterator</a> & <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a6b9e64155af15bf1b5c93473a4494e91">operator++</a>()</div>
166
<div class="line"><a name="l00164"></a><span class="lineno"> 164</span>  {</div>
167
<div class="line"><a name="l00165"></a><span class="lineno"> 165</span>  <span class="comment">//no increment if this is the end iterator</span></div>
168
<div class="line"><a name="l00166"></a><span class="lineno"> 166</span>  <span class="keywordflow">if</span> (<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>) <span class="keywordflow">return</span> *<span class="keyword">this</span>;</div>
169
<div class="line"><a name="l00167"></a><span class="lineno"> 167</span> </div>
170
<div class="line"><a name="l00168"></a><span class="lineno"> 168</span>  ++<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a>;</div>
171
<div class="line"><a name="l00169"></a><span class="lineno"> 169</span>  <span class="comment">// test whether we arrived at the end of the current scan</span></div>
172
<div class="line"><a name="l00170"></a><span class="lineno"> 170</span>  <span class="keywordflow">if</span> (<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a> == <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81">end_peak_</a>)</div>
173
<div class="line"><a name="l00171"></a><span class="lineno"> 171</span>  {</div>
174
<div class="line"><a name="l00172"></a><span class="lineno"> 172</span>  ++<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>;</div>
175
<div class="line"><a name="l00173"></a><span class="lineno"> 173</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ac36eab8fd07dc1782476b9aa082eba7b">nextScan_</a>();</div>
176
<div class="line"><a name="l00174"></a><span class="lineno"> 174</span>  }</div>
177
<div class="line"><a name="l00175"></a><span class="lineno"> 175</span>  <span class="keywordflow">return</span> *<span class="keyword">this</span>;</div>
178
<div class="line"><a name="l00176"></a><span class="lineno"> 176</span>  }</div>
179
<div class="line"><a name="l00177"></a><span class="lineno"> 177</span> </div>
180
<div class="line"><a name="l00179"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a988098a0ff003584205156973616f592"> 179</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html">AreaIterator</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a988098a0ff003584205156973616f592">operator++</a>(<span class="keywordtype">int</span>)</div>
181
<div class="line"><a name="l00180"></a><span class="lineno"> 180</span>  {</div>
182
<div class="line"><a name="l00181"></a><span class="lineno"> 181</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html">AreaIterator</a> tmp(*<span class="keyword">this</span>);</div>
183
<div class="line"><a name="l00182"></a><span class="lineno"> 182</span>  ++(*this);</div>
184
<div class="line"><a name="l00183"></a><span class="lineno"> 183</span>  <span class="keywordflow">return</span> tmp;</div>
185
<div class="line"><a name="l00184"></a><span class="lineno"> 184</span>  }</div>
186
<div class="line"><a name="l00185"></a><span class="lineno"> 185</span> </div>
187
<div class="line"><a name="l00187"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aa149c2249879e7727f33688b76bf2c99"> 187</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab454be3e4a0684f57fb6acb877efa01f">reference</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aa149c2249879e7727f33688b76bf2c99">operator*</a>()<span class="keyword"> const</span></div>
188
<div class="line"><a name="l00188"></a><span class="lineno"> 188</span> <span class="keyword"> </span>{</div>
189
<div class="line"><a name="l00189"></a><span class="lineno"> 189</span>  <span class="keywordflow">return</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a>.operator*();</div>
190
<div class="line"><a name="l00190"></a><span class="lineno"> 190</span>  }</div>
191
<div class="line"><a name="l00191"></a><span class="lineno"> 191</span> </div>
192
<div class="line"><a name="l00193"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a33ce448509e9cc0d73861e4c1919c7a7"> 193</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a2aa253eb72ecbc469c97c3996ef9fa32">pointer</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a33ce448509e9cc0d73861e4c1919c7a7">operator-></a>()<span class="keyword"> const</span></div>
193
<div class="line"><a name="l00194"></a><span class="lineno"> 194</span> <span class="keyword"> </span>{</div>
194
<div class="line"><a name="l00195"></a><span class="lineno"> 195</span>  <span class="keywordflow">return</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a>.operator->();</div>
195
<div class="line"><a name="l00196"></a><span class="lineno"> 196</span>  }</div>
196
<div class="line"><a name="l00197"></a><span class="lineno"> 197</span> </div>
197
<div class="line"><a name="l00199"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab4e0f356f837ce58e57695da114adce3"> 199</a></span>  <a class="code" href="classdouble.html">CoordinateType</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab4e0f356f837ce58e57695da114adce3">getRT</a>()<span class="keyword"> const</span></div>
198
<div class="line"><a name="l00200"></a><span class="lineno"> 200</span> <span class="keyword"> </span>{</div>
199
<div class="line"><a name="l00201"></a><span class="lineno"> 201</span>  <span class="keywordflow">return</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>->getRT();</div>
200
<div class="line"><a name="l00202"></a><span class="lineno"> 202</span>  }</div>
201
<div class="line"><a name="l00203"></a><span class="lineno"> 203</span> </div>
202
<div class="line"><a name="l00205"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a04ee7c4cfc8a4702927b95eaa7005fe2"> 205</a></span>  <span class="keyword">inline</span> <a class="code" href="structOpenMS_1_1PeakIndex.html">PeakIndex</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a04ee7c4cfc8a4702927b95eaa7005fe2">getPeakIndex</a>()<span class="keyword"> const</span></div>
203
<div class="line"><a name="l00206"></a><span class="lineno"> 206</span> <span class="keyword"> </span>{</div>
204
<div class="line"><a name="l00207"></a><span class="lineno"> 207</span>  <span class="keywordflow">if</span> (<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>)</div>
205
<div class="line"><a name="l00208"></a><span class="lineno"> 208</span>  {</div>
206
<div class="line"><a name="l00209"></a><span class="lineno"> 209</span>  <span class="keywordflow">return</span> <a class="code" href="structOpenMS_1_1PeakIndex.html">PeakIndex</a>();</div>
207
<div class="line"><a name="l00210"></a><span class="lineno"> 210</span>  }</div>
208
<div class="line"><a name="l00211"></a><span class="lineno"> 211</span>  <span class="keywordflow">else</span></div>
209
<div class="line"><a name="l00212"></a><span class="lineno"> 212</span>  {</div>
210
<div class="line"><a name="l00213"></a><span class="lineno"> 213</span>  <span class="keywordflow">return</span> <a class="code" href="structOpenMS_1_1PeakIndex.html">PeakIndex</a>(<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a> - <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a943de052440de9aead010af821766897">first_</a>, <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a> - <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>->begin());</div>
211
<div class="line"><a name="l00214"></a><span class="lineno"> 214</span>  }</div>
212
<div class="line"><a name="l00215"></a><span class="lineno"> 215</span>  }</div>
213
<div class="line"><a name="l00216"></a><span class="lineno"> 216</span> </div>
214
<div class="line"><a name="l00217"></a><span class="lineno"> 217</span> <span class="keyword">private</span>:</div>
215
<div class="line"><a name="l00218"></a><span class="lineno"> 218</span>  <span class="comment">//Advances to the iterator to the next valid peak in the next valid spectrum</span></div>
216
<div class="line"><a name="l00219"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ac36eab8fd07dc1782476b9aa082eba7b"> 219</a></span>  <span class="keywordtype">void</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#ac36eab8fd07dc1782476b9aa082eba7b">nextScan_</a>()</div>
217
<div class="line"><a name="l00220"></a><span class="lineno"> 220</span>  {</div>
218
<div class="line"><a name="l00221"></a><span class="lineno"> 221</span>  <span class="keywordflow">while</span> (<span class="keyword">true</span>)</div>
219
<div class="line"><a name="l00222"></a><span class="lineno"> 222</span>  {</div>
220
<div class="line"><a name="l00223"></a><span class="lineno"> 223</span>  <span class="comment">//if (current_scan_ != end_scan_) std::cout << "RT: " << current_scan_->getRT() << std::endl;</span></div>
221
<div class="line"><a name="l00224"></a><span class="lineno"> 224</span>  <span class="keywordflow">while</span> (<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a> != <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9">end_scan_</a> && <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>->getMSLevel() != 1)</div>
222
<div class="line"><a name="l00225"></a><span class="lineno"> 225</span>  {</div>
223
<div class="line"><a name="l00226"></a><span class="lineno"> 226</span>  ++<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>;</div>
224
<div class="line"><a name="l00227"></a><span class="lineno"> 227</span>  }</div>
225
<div class="line"><a name="l00228"></a><span class="lineno"> 228</span>  <span class="keywordflow">if</span> (<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a> == <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9">end_scan_</a>)</div>
226
<div class="line"><a name="l00229"></a><span class="lineno"> 229</span>  {</div>
227
<div class="line"><a name="l00230"></a><span class="lineno"> 230</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a> = <span class="keyword">true</span>;</div>
228
<div class="line"><a name="l00231"></a><span class="lineno"> 231</span>  <span class="keywordflow">return</span>;</div>
229
<div class="line"><a name="l00232"></a><span class="lineno"> 232</span>  }</div>
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<div class="line"><a name="l00233"></a><span class="lineno"> 233</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a> = <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>->MZBegin(<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a343ed7f24328396b41105adc1101772b">low_mz_</a>);</div>
231
<div class="line"><a name="l00234"></a><span class="lineno"> 234</span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81">end_peak_</a> = <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>->MZEnd(<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a3f4a99b41d968bc11c4e2b57ef3e3ba2">high_mz_</a>);</div>
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<div class="line"><a name="l00235"></a><span class="lineno"> 235</span>  <span class="keywordflow">if</span> (<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a> != <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81">end_peak_</a>)</div>
233
<div class="line"><a name="l00236"></a><span class="lineno"> 236</span>  {</div>
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<div class="line"><a name="l00237"></a><span class="lineno"> 237</span>  <span class="keywordflow">return</span>;</div>
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<div class="line"><a name="l00238"></a><span class="lineno"> 238</span>  }</div>
236
<div class="line"><a name="l00239"></a><span class="lineno"> 239</span>  ++<a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>;</div>
237
<div class="line"><a name="l00240"></a><span class="lineno"> 240</span>  }</div>
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<div class="line"><a name="l00241"></a><span class="lineno"> 241</span>  }</div>
239
<div class="line"><a name="l00242"></a><span class="lineno"> 242</span> </div>
240
<div class="line"><a name="l00244"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a943de052440de9aead010af821766897"> 244</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#adc79310c076ece0c5b1dc84e0d7c8a0c">SpectrumIteratorType</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a943de052440de9aead010af821766897">first_</a>;</div>
241
<div class="line"><a name="l00246"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065"> 246</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#adc79310c076ece0c5b1dc84e0d7c8a0c">SpectrumIteratorType</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">current_scan_</a>;</div>
242
<div class="line"><a name="l00248"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9"> 248</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#adc79310c076ece0c5b1dc84e0d7c8a0c">SpectrumIteratorType</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9">end_scan_</a>;</div>
243
<div class="line"><a name="l00250"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108"> 250</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8d96a7aab759beae5a0d0d678a3ddfbc">PeakIteratorType</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">current_peak_</a>;</div>
244
<div class="line"><a name="l00252"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81"> 252</a></span>  <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8d96a7aab759beae5a0d0d678a3ddfbc">PeakIteratorType</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81">end_peak_</a>;</div>
245
<div class="line"><a name="l00254"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a343ed7f24328396b41105adc1101772b"> 254</a></span>  <a class="code" href="classdouble.html">CoordinateType</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a343ed7f24328396b41105adc1101772b">low_mz_</a>;</div>
246
<div class="line"><a name="l00256"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a3f4a99b41d968bc11c4e2b57ef3e3ba2"> 256</a></span>  <a class="code" href="classdouble.html">CoordinateType</a> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a3f4a99b41d968bc11c4e2b57ef3e3ba2">high_mz_</a>;</div>
247
<div class="line"><a name="l00258"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f"> 258</a></span>  <span class="keywordtype">bool</span> <a class="code" href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">is_end_</a>;</div>
248
<div class="line"><a name="l00259"></a><span class="lineno"> 259</span> </div>
249
<div class="line"><a name="l00260"></a><span class="lineno"> 260</span>  };</div>
250
<div class="line"><a name="l00261"></a><span class="lineno"> 261</span> </div>
251
<div class="line"><a name="l00262"></a><span class="lineno"> 262</span>  }</div>
252
<div class="line"><a name="l00263"></a><span class="lineno"> 263</span> }</div>
253
<div class="line"><a name="l00264"></a><span class="lineno"> 264</span> </div>
254
<div class="line"><a name="l00265"></a><span class="lineno"> 265</span> <span class="preprocessor">#endif</span></div>
255
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a8180bf5085746a6a4676a698e408826f"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8180bf5085746a6a4676a698e408826f">OpenMS::Internal::AreaIterator::operator!=</a></div><div class="ttdeci">bool operator!=(const AreaIterator &rhs) const </div><div class="ttdoc">Test for inequality. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:157</div></div>
256
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a8d96a7aab759beae5a0d0d678a3ddfbc"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8d96a7aab759beae5a0d0d678a3ddfbc">OpenMS::Internal::AreaIterator::PeakIteratorType</a></div><div class="ttdeci">PeakIteratorT PeakIteratorType</div><div class="ttdef"><b>Definition:</b> AreaIterator.h:65</div></div>
257
<div class="ttc" id="Types_8h_html"><div class="ttname"><a href="Types_8h.html">Types.h</a></div></div>
258
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_ad01d706f431cfcb74b2c1bce6e12c840"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#ad01d706f431cfcb74b2c1bce6e12c840">OpenMS::Internal::AreaIterator::PeakType</a></div><div class="ttdeci">ValueT PeakType</div><div class="ttdef"><b>Definition:</b> AreaIterator.h:63</div></div>
259
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_aaa2532a551a14261d39b1837608fa4a9"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#aaa2532a551a14261d39b1837608fa4a9">OpenMS::Internal::AreaIterator::end_scan_</a></div><div class="ttdeci">SpectrumIteratorType end_scan_</div><div class="ttdoc">Past-the-end iterator of spectra. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:248</div></div>
260
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_ae0fc2cf8879f8e5ff4071e9d13fdb609"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#ae0fc2cf8879f8e5ff4071e9d13fdb609">OpenMS::Internal::AreaIterator::operator=</a></div><div class="ttdeci">AreaIterator & operator=(const AreaIterator &rhs)</div><div class="ttdoc">Assignment operator. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:121</div></div>
261
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a6a0b252676cf060277557ca694d5bdab"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a6a0b252676cf060277557ca694d5bdab">OpenMS::Internal::AreaIterator::operator==</a></div><div class="ttdeci">bool operator==(const AreaIterator &rhs) const </div><div class="ttdoc">Test for equality. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:142</div></div>
262
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_ab879a9fb1901fe73383ba7effe49ad4c"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab879a9fb1901fe73383ba7effe49ad4c">OpenMS::Internal::AreaIterator::AreaIterator</a></div><div class="ttdeci">AreaIterator(const AreaIterator &rhs)</div><div class="ttdoc">Copy constructor. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:109</div></div>
263
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_ac36eab8fd07dc1782476b9aa082eba7b"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#ac36eab8fd07dc1782476b9aa082eba7b">OpenMS::Internal::AreaIterator::nextScan_</a></div><div class="ttdeci">void nextScan_()</div><div class="ttdef"><b>Definition:</b> AreaIterator.h:219</div></div>
264
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a04ee7c4cfc8a4702927b95eaa7005fe2"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a04ee7c4cfc8a4702927b95eaa7005fe2">OpenMS::Internal::AreaIterator::getPeakIndex</a></div><div class="ttdeci">PeakIndex getPeakIndex() const </div><div class="ttdoc">returns the PeakIndex corresponding to the current iterator position </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:205</div></div>
265
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html">OpenMS::Internal::AreaIterator</a></div><div class="ttdoc">Forward iterator for an area of peaks in an experiment. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:58</div></div>
266
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a72e7fda76e137ddd65b57234035b6067"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a72e7fda76e137ddd65b57234035b6067">OpenMS::Internal::AreaIterator::difference_type</a></div><div class="ttdeci">unsigned int difference_type</div><div class="ttdoc">The difference type. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:77</div></div>
267
<div class="ttc" id="classdouble_html"><div class="ttname"><a href="classdouble.html">double</a></div></div>
268
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a063d40a3528749f1a905ab04d76387e0"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a063d40a3528749f1a905ab04d76387e0">OpenMS::Internal::AreaIterator::CoordinateType</a></div><div class="ttdeci">DoubleReal CoordinateType</div><div class="ttdef"><b>Definition:</b> AreaIterator.h:62</div></div>
269
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a343ed7f24328396b41105adc1101772b"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a343ed7f24328396b41105adc1101772b">OpenMS::Internal::AreaIterator::low_mz_</a></div><div class="ttdeci">CoordinateType low_mz_</div><div class="ttdoc">low m/z boundary </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:254</div></div>
270
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a3f4a99b41d968bc11c4e2b57ef3e3ba2"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a3f4a99b41d968bc11c4e2b57ef3e3ba2">OpenMS::Internal::AreaIterator::high_mz_</a></div><div class="ttdeci">CoordinateType high_mz_</div><div class="ttdoc">high m/z boundary </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:256</div></div>
271
<div class="ttc" id="PeakIndex_8h_html"><div class="ttname"><a href="PeakIndex_8h.html">PeakIndex.h</a></div></div>
272
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a42b750306a625660568d552f88f7fc81"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a42b750306a625660568d552f88f7fc81">OpenMS::Internal::AreaIterator::end_peak_</a></div><div class="ttdeci">PeakIteratorType end_peak_</div><div class="ttdoc">Past-the-end iterator of peaks in the current spectrum. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:252</div></div>
273
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a988098a0ff003584205156973616f592"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a988098a0ff003584205156973616f592">OpenMS::Internal::AreaIterator::operator++</a></div><div class="ttdeci">AreaIterator operator++(int)</div><div class="ttdoc">Step forward by one (postfix operator) </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:179</div></div>
274
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a6bdd691624377f9846f352f72dd0814d"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a6bdd691624377f9846f352f72dd0814d">OpenMS::Internal::AreaIterator::AreaIterator</a></div><div class="ttdeci">AreaIterator()</div><div class="ttdoc">Default constructor (for the end iterator) </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:93</div></div>
275
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_af1369d1286e64b0a88fa32aed8d31808"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#af1369d1286e64b0a88fa32aed8d31808">OpenMS::Internal::AreaIterator::~AreaIterator</a></div><div class="ttdeci">~AreaIterator()</div><div class="ttdoc">Destructor. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:105</div></div>
276
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_adc79310c076ece0c5b1dc84e0d7c8a0c"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#adc79310c076ece0c5b1dc84e0d7c8a0c">OpenMS::Internal::AreaIterator::SpectrumIteratorType</a></div><div class="ttdeci">SpectrumIteratorT SpectrumIteratorType</div><div class="ttdef"><b>Definition:</b> AreaIterator.h:64</div></div>
277
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_aa149c2249879e7727f33688b76bf2c99"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#aa149c2249879e7727f33688b76bf2c99">OpenMS::Internal::AreaIterator::operator*</a></div><div class="ttdeci">reference operator*() const </div><div class="ttdoc">Dereferencing of this pointer yields the underlying peak. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:187</div></div>
278
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a8b914b54d6819e99097a070a5baf9108"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a8b914b54d6819e99097a070a5baf9108">OpenMS::Internal::AreaIterator::current_peak_</a></div><div class="ttdeci">PeakIteratorType current_peak_</div><div class="ttdoc">Iterator to the current peak. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:250</div></div>
279
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_ab454be3e4a0684f57fb6acb877efa01f"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab454be3e4a0684f57fb6acb877efa01f">OpenMS::Internal::AreaIterator::reference</a></div><div class="ttdeci">ReferenceT reference</div><div class="ttdoc">The reference type as returned by operator*() </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:73</div></div>
280
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a33ce448509e9cc0d73861e4c1919c7a7"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a33ce448509e9cc0d73861e4c1919c7a7">OpenMS::Internal::AreaIterator::operator-></a></div><div class="ttdeci">pointer operator->() const </div><div class="ttdoc">Dereferencing of this pointer yields the underlying peak. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:193</div></div>
281
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a17cd0ba39aadbffe917f655070cf3065"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a17cd0ba39aadbffe917f655070cf3065">OpenMS::Internal::AreaIterator::current_scan_</a></div><div class="ttdeci">SpectrumIteratorType current_scan_</div><div class="ttdoc">Iterator to the current spectrum. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:246</div></div>
282
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a2aa253eb72ecbc469c97c3996ef9fa32"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a2aa253eb72ecbc469c97c3996ef9fa32">OpenMS::Internal::AreaIterator::pointer</a></div><div class="ttdeci">PointerT pointer</div><div class="ttdoc">The pointer type as returned by operator-&gt;() </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:75</div></div>
283
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a943de052440de9aead010af821766897"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a943de052440de9aead010af821766897">OpenMS::Internal::AreaIterator::first_</a></div><div class="ttdeci">SpectrumIteratorType first_</div><div class="ttdoc">Iterator to the first scan of the map (needed to calculate the index) </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:244</div></div>
284
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a44f6ca289754b6a15b7d99691206e0a5"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a44f6ca289754b6a15b7d99691206e0a5">OpenMS::Internal::AreaIterator::value_type</a></div><div class="ttdeci">ValueT value_type</div><div class="ttdoc">The iterator&#39;s value type. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:71</div></div>
285
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a7c3ab0e6a580aa91421f76acf462735f"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a7c3ab0e6a580aa91421f76acf462735f">OpenMS::Internal::AreaIterator::is_end_</a></div><div class="ttdeci">bool is_end_</div><div class="ttdoc">Flag that indicates that this iterator is the end iterator. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:258</div></div>
286
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_adaf0598df902fefc37e9f27540c93f60"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#adaf0598df902fefc37e9f27540c93f60">OpenMS::Internal::AreaIterator::AreaIterator</a></div><div class="ttdeci">AreaIterator(SpectrumIteratorType first, SpectrumIteratorType begin, SpectrumIteratorType end, CoordinateType low_mz, CoordinateType high_mz)</div><div class="ttdoc">Constructor for the begin iterator. </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:81</div></div>
287
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_a6b9e64155af15bf1b5c93473a4494e91"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#a6b9e64155af15bf1b5c93473a4494e91">OpenMS::Internal::AreaIterator::operator++</a></div><div class="ttdeci">AreaIterator & operator++()</div><div class="ttdoc">Step forward by one (prefix operator) </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:163</div></div>
288
<div class="ttc" id="structOpenMS_1_1PeakIndex_html"><div class="ttname"><a href="structOpenMS_1_1PeakIndex.html">OpenMS::PeakIndex</a></div><div class="ttdoc">Index of a peak or feature. </div><div class="ttdef"><b>Definition:</b> PeakIndex.h:51</div></div>
289
<div class="ttc" id="classOpenMS_1_1Internal_1_1AreaIterator_html_ab4e0f356f837ce58e57695da114adce3"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1AreaIterator.html#ab4e0f356f837ce58e57695da114adce3">OpenMS::Internal::AreaIterator::getRT</a></div><div class="ttdeci">CoordinateType getRT() const </div><div class="ttdoc">returns the retention time of the current scan </div><div class="ttdef"><b>Definition:</b> AreaIterator.h:199</div></div>
290
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:11 using doxygen 1.8.5</font></TD>
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